RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	TAF5	P38129	798 aa		13.79	□□□□□ -0.2
SAM1	YLR180W	RTC1	Q08281	1341 aa		13.76	□□□□□ -0.21
SAM1	YLR180W	YBL086C	P38177	466 aa		13.75	□□□□□ -0.21
SAM1	YLR180W	BFR2	Q06631	534 aa	Known RBP	13.74	□□□□□ -0.21
SAM1	YLR180W	RPN11	P43588	306 aa	Known RBP	13.73	□□□□□ -0.21
SAM1	YLR180W	NAP1	P25293	417 aa	Known RBP	13.71	□□□□□ -0.21
SAM1	YLR180W	CPS1	P27614	576 aa		13.71	□□□□□ -0.21
SAM1	YLR180W	PRP5	P21372	849 aa	Predicted RBP	13.69	□□□□□ -0.22
SAM1	YLR180W	SSA1	P10591	642 aa	Known RBP	13.68	□□□□□ -0.22
SAM1	YLR180W	UGA2	P38067	497 aa		13.68	□□□□□ -0.22
SAM1	YLR180W	GTT3	P39996	337 aa		13.65	□□□□□ -0.22
SAM1	YLR180W	RCM1	P53972	490 aa		13.65	□□□□□ -0.22
SAM1	YLR180W	EDE1	P34216	1381 aa		13.64	□□□□□ -0.23
SAM1	YLR180W	DOT5	P40553	215 aa		13.64	□□□□□ -0.23
SAM1	YLR180W	TY4B-H	P0C2J7	1802 aa		13.62	□□□□□ -0.23
SAM1	YLR180W	TY4B-J	P47024	1803 aa		13.62	□□□□□ -0.23
SAM1	YLR180W	PSK1	P31374	1356 aa		13.62	□□□□□ -0.23
SAM1	YLR180W	URB1	P34241	1764 aa	Known RBP	13.62	□□□□□ -0.23
SAM1	YLR180W	IES2	P40154	320 aa		13.61	□□□□□ -0.23
SAM1	YLR180W	MSB3	P48566	633 aa	Predicted RBP	13.61	□□□□□ -0.23
SAM1	YLR180W	TAF8	Q03750	510 aa		13.61	□□□□□ -0.23
SAM1	YLR180W	YJL181W	P46987	611 aa		13.59	□□□□□ -0.23
SAM1	YLR180W	ALD2	P47771	506 aa		13.59	□□□□□ -0.23
SAM1	YLR180W	LYS4	P49367	693 aa	Predicted RBP	13.58	□□□□□ -0.24
SAM1	YLR180W	NOP7	P53261	605 aa	Known RBP	13.58	□□□□□ -0.24
SAM1	YLR180W	ROM2	P51862	1356 aa	Known RBP	13.58	□□□□□ -0.24
SAM1	YLR180W	NPR2	P39923	615 aa		13.57	□□□□□ -0.24
SAM1	YLR180W	SSA2	P10592	639 aa	Known RBP	13.56	□□□□□ -0.24
SAM1	YLR180W	PPH3	P32345	308 aa		13.56	□□□□□ -0.24
SAM1	YLR180W	FOX2	Q02207	900 aa	Known RBP	13.56	□□□□□ -0.24
SAM1	YLR180W	TCB1	Q12466	1186 aa		13.53	□□□□□ -0.24
SAM1	YLR180W	ADE6	P38972	1358 aa	Known RBP	13.51	□□□□□ -0.25
SAM1	YLR180W	ESL2	P36168	1195 aa		13.51	□□□□□ -0.25
SAM1	YLR180W	RSF2	P46974	1380 aa		13.5	□□□□□ -0.25
SAM1	YLR180W	FKS3	Q04952	1785 aa		13.5	□□□□□ -0.25
SAM1	YLR180W	YEF3	P16521	1044 aa	Known RBP	13.49	□□□□□ -0.25
SAM1	YLR180W	PRP40	P33203	583 aa	Known RBP	13.49	□□□□□ -0.25
SAM1	YLR180W	LAM6	Q08001	693 aa		13.49	□□□□□ -0.25
SAM1	YLR180W	CTH1	P47976	325 aa		13.46	□□□□□ -0.25
SAM1	YLR180W	SLM3	Q12093	417 aa		13.43	□□□□□ -0.26
SAM1	YLR180W	YKL133C	P36066	463 aa		13.41	□□□□□ -0.26
SAM1	YLR180W	RRD1	P40454	393 aa	Known RBP	13.41	□□□□□ -0.26
SAM1	YLR180W	COB	P00163	385 aa		13.39	□□□□□ -0.27
SAM1	YLR180W	ENP1	P38333	483 aa	Known RBP	13.39	□□□□□ -0.27
SAM1	YLR180W	YRF1-3	P0CX14	1859 aa		13.37	□□□□□ -0.27
SAM1	YLR180W	YRF1-7	P0CX15	1859 aa		13.37	□□□□□ -0.27
SAM1	YLR180W	YRF1-6	P53819	1859 aa		13.37	□□□□□ -0.27
SAM1	YLR180W	YKR075C	P36155	307 aa		13.36	□□□□□ -0.27
SAM1	YLR180W	CSE4	P36012	229 aa		13.34	□□□□□ -0.27
SAM1	YLR180W	YRF1-4	O13559	1382 aa		13.32	□□□□□ -0.28
SAM1	YLR180W	XKS1	P42826	600 aa		13.32	□□□□□ -0.28
SAM1	YLR180W	PRP43	P53131	767 aa	Known RBP	13.31	□□□□□ -0.28
SAM1	YLR180W	RPS24A	P0CX31	135 aa	Known RBP	13.3	□□□□□ -0.28
SAM1	YLR180W	RPS24B	P0CX32	135 aa	Known RBP	13.3	□□□□□ -0.28
SAM1	YLR180W	SPE2	P21182	396 aa		13.3	□□□□□ -0.28
SAM1	YLR180W	LEU2	P04173	364 aa	Predicted RBP	13.29	□□□□□ -0.28
SAM1	YLR180W	MTR4	P47047	1073 aa	Known RBP	13.29	□□□□□ -0.28
SAM1	YLR180W	SPT7	P35177	1332 aa		13.28	□□□□□ -0.28
SAM1	YLR180W	BDF1	P35817	686 aa		13.26	□□□□□ -0.29
SAM1	YLR180W	ALD3	P54114	506 aa		13.26	□□□□□ -0.29
SAM1	YLR180W	APC1	P53886	1748 aa		13.24	□□□□□ -0.29
SAM1	YLR180W	KIP3	P53086	805 aa	Known RBP	13.23	□□□□□ -0.29
SAM1	YLR180W	RPG1	P38249	964 aa	Known RBP	13.22	□□□□□ -0.29
SAM1	YLR180W	FRK1	Q03002	865 aa	Predicted RBP	13.19	□□□□□ -0.3
SAM1	YLR180W	YIL177C	P40434	1758 aa		13.19	□□□□□ -0.3
SAM1	YLR180W	YJL225C	P40889	1758 aa		13.19	□□□□□ -0.3
SAM1	YLR180W	SNF2	P22082	1703 aa		13.19	□□□□□ -0.3
SAM1	YLR180W	MEC3	Q02574	474 aa		13.18	□□□□□ -0.3
SAM1	YLR180W	CHZ1	P40019	153 aa	Predicted RBP	13.17	□□□□□ -0.3
SAM1	YLR180W	EAF6	P47128	113 aa		13.16	□□□□□ -0.3
SAM1	YLR180W	MSB4	Q12317	492 aa		13.16	□□□□□ -0.3
SAM1	YLR180W	YLR419W	Q06698	1435 aa	Known RBP	13.14	□□□□□ -0.31
SAM1	YLR180W	SAP155	P43612	1002 aa		13.12	□□□□□ -0.31
SAM1	YLR180W	BUG1	Q12191	341 aa		13.12	□□□□□ -0.31
SAM1	YLR180W	ADE16	P54113	591 aa	Known RBP	13.1	□□□□□ -0.31
SAM1	YLR180W	SIR4	P11978	1358 aa		13.08	□□□□□ -0.31
SAM1	YLR180W	RCR1	P38212	213 aa		13.08	□□□□□ -0.32
SAM1	YLR180W	DPS1	P04802	557 aa	Known RBP	13.07	□□□□□ -0.32
SAM1	YLR180W	TOS1	P38288	455 aa		13.06	□□□□□ -0.32
SAM1	YLR180W	MSN5	P52918	1224 aa		13.06	□□□□□ -0.32
SAM1	YLR180W	ATG13	Q06628	738 aa		13.05	□□□□□ -0.32
SAM1	YLR180W	RPO41	P13433	1351 aa	Known RBP	13.05	□□□□□ -0.32
SAM1	YLR180W	GAS4	Q08271	471 aa		13.04	□□□□□ -0.32
SAM1	YLR180W	UTP22	P53254	1237 aa	Predicted RBP	13.03	□□□□□ -0.32
SAM1	YLR180W	HPC2	Q01448	625 aa		13.03	□□□□□ -0.32
SAM1	YLR180W	GRE2	Q12068	342 aa	Known RBP	13.03	□□□□□ -0.32
SAM1	YLR180W	YML133C	Q03099	1374 aa		13.03	□□□□□ -0.32
SAM1	YLR180W	YLL067C	Q07888	1374 aa		13.03	□□□□□ -0.32
SAM1	YLR180W	YLL066C	Q99208	1374 aa		13.03	□□□□□ -0.32
SAM1	YLR180W	CTT1	P06115	562 aa		13.02	□□□□□ -0.33
SAM1	YLR180W	RAD4	P14736	754 aa		13.02	□□□□□ -0.33
SAM1	YLR180W	RIM15	P43565	1770 aa		13.02	□□□□□ -0.33
SAM1	YLR180W	YER156C	P40093	338 aa	Known RBP	13.01	□□□□□ -0.33
SAM1	YLR180W	SSA4	P22202	642 aa	Known RBP	13	□□□□□ -0.33
SAM1	YLR180W	SQS1	P53866	767 aa	Known RBP	13	□□□□□ -0.33
SAM1	YLR180W	MHP1	P43638	1398 aa		12.98	□□□□□ -0.33
SAM1	YLR180W	PEX21	P50091	288 aa		12.98	□□□□□ -0.33
SAM1	YLR180W	RTF1	P53064	558 aa		12.97	□□□□□ -0.33
SAM1	YLR180W	ORC1	P54784	914 aa	Predicted RBP	12.97	□□□□□ -0.33
SAM1	YLR180W	GRX1	P25373	110 aa	Known RBP	12.96	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms