RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C TY1B-DR6P0C2I3 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-LR2P0C2I5 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-LR3P0C2I6 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C TY1B-PR1P0C2I9 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C TY1B-PR2P0C2J0 1756 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-PR3P0C2J1 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C TY1B-JR1P47098 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-ML2Q03434 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C TY1B-ER1Q03612 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-ML1Q04711 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C TY1B-GR2Q12269 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-OLQ12273 1755 aa7.23□□□□□ -1.25
UBI4YLL039C TY1B-PLQ12414 1755 aaKnown RBP7.23□□□□□ -1.25
UBI4YLL039C UBP14P38237 781 aaKnown RBP7.22□□□□□ -1.25
UBI4YLL039C PAN1P32521 1480 aa7.22□□□□□ -1.25
UBI4YLL039C SMC4Q12267 1418 aa7.21□□□□□ -1.25
UBI4YLL039C YPR015CQ12531 247 aa7.21□□□□□ -1.26
UBI4YLL039C DNF1P32660 1571 aa7.2□□□□□ -1.26
UBI4YLL039C ESC1Q03661 1658 aaKnown RBP7.2□□□□□ -1.26
UBI4YLL039C RAM1P22007 431 aa7.2□□□□□ -1.26
UBI4YLL039C CDC73Q06697 393 aa7.2□□□□□ -1.26
UBI4YLL039C ISU2Q12056 156 aa7.2□□□□□ -1.26
UBI4YLL039C MMS22Q06164 1454 aa7.19□□□□□ -1.26
UBI4YLL039C VHR2P40041 505 aa7.18□□□□□ -1.26
UBI4YLL039C PCS60P38137 543 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
UBI4YLL039C SRC1Q03707 834 aa7.16□□□□□ -1.26
UBI4YLL039C RPA190P10964 1664 aaKnown RBP7.16□□□□□ -1.26
UBI4YLL039C MET5P47169 1442 aa7.15□□□□□ -1.27
UBI4YLL039C SPP41P38904 1435 aa7.14□□□□□ -1.27
UBI4YLL039C YTA7P40340 1379 aa7.14□□□□□ -1.27
UBI4YLL039C RAD54P32863 898 aa7.12□□□□□ -1.27
UBI4YLL039C TRM732Q03496 1420 aa7.11□□□□□ -1.27
UBI4YLL039C PDR1P12383 1068 aa7.11□□□□□ -1.27
UBI4YLL039C RAS1P01119 309 aa7.1□□□□□ -1.27
UBI4YLL039C TY1B-JR2P47100 1755 aaKnown RBP7.1□□□□□ -1.27
UBI4YLL039C TY1B-ER2Q03619 1755 aa7.1□□□□□ -1.27
UBI4YLL039C TY1B-MR1Q04214 1755 aa7.1□□□□□ -1.27
UBI4YLL039C TY1B-MR2Q04670 1755 aaKnown RBP7.1□□□□□ -1.27
UBI4YLL039C TY1B-LR1Q12088 1755 aaKnown RBP7.1□□□□□ -1.27
UBI4YLL039C TY1B-NL1Q12112 1755 aa7.1□□□□□ -1.27
UBI4YLL039C TY1B-GR1Q12141 1755 aa7.1□□□□□ -1.27
UBI4YLL039C TY1B-BLQ12490 1755 aa7.1□□□□□ -1.27
UBI4YLL039C TSC11P40061 1430 aa7.1□□□□□ -1.27
UBI4YLL039C YDR090CQ03193 310 aa7.09□□□□□ -1.27
UBI4YLL039C MYO4P32492 1471 aa7.09□□□□□ -1.27
UBI4YLL039C VTH1P40438 1549 aa7.07□□□□□ -1.28
UBI4YLL039C VTH2P40890 1549 aa7.07□□□□□ -1.28
UBI4YLL039C IFH1P39520 1085 aa7.05□□□□□ -1.28
UBI4YLL039C GYP1Q08484 637 aa7.05□□□□□ -1.28
UBI4YLL039C SDH2P21801 266 aa7.04□□□□□ -1.28
UBI4YLL039C RPP1BP10622 106 aaKnown RBP7.03□□□□□ -1.28
UBI4YLL039C YPR148CQ06523 435 aa7.03□□□□□ -1.28
UBI4YLL039C NUP159P40477 1460 aa7.03□□□□□ -1.28
UBI4YLL039C YRF1-1P0CX20 1796 aa7.03□□□□□ -1.28
UBI4YLL039C YRF1-5P0CX21 1796 aa7.03□□□□□ -1.28
UBI4YLL039C YRF1-8P0CX22 1796 aa7.03□□□□□ -1.28
UBI4YLL039C LTE1P07866 1435 aa7.02□□□□□ -1.29
UBI4YLL039C NTE1Q04958 1679 aa7.02□□□□□ -1.29
UBI4YLL039C STH1P32597 1359 aa7.01□□□□□ -1.29
UBI4YLL039C GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
UBI4YLL039C RPO21P04050 1733 aaKnown RBP7.01□□□□□ -1.29
UBI4YLL039C AMS1P22855 1083 aa7□□□□□ -1.29
UBI4YLL039C SAS4Q04003 481 aa7□□□□□ -1.29
UBI4YLL039C SNQ2P32568 1501 aaKnown RBP7□□□□□ -1.29
UBI4YLL039C KIC1P38692 1080 aa6.99□□□□□ -1.29
UBI4YLL039C REF2P42073 533 aaPredicted RBP6.99□□□□□ -1.29
UBI4YLL039C SNT2P53127 1403 aa6.99□□□□□ -1.29
UBI4YLL039C YRR1Q12172 810 aa6.98□□□□□ -1.29
UBI4YLL039C BUD20Q08004 166 aaPredicted RBP6.97□□□□□ -1.29
UBI4YLL039C SAS10Q12136 610 aaPredicted RBP6.97□□□□□ -1.29
UBI4YLL039C VPS15P22219 1454 aa6.96□□□□□ -1.3
UBI4YLL039C BNI1P41832 1953 aa6.95□□□□□ -1.3
UBI4YLL039C CSC1Q06538 782 aa6.95□□□□□ -1.3
UBI4YLL039C GEA2P39993 1459 aaKnown RBP6.95□□□□□ -1.3
UBI4YLL039C STR2P47164 639 aa6.94□□□□□ -1.3
UBI4YLL039C PEX21P50091 288 aa6.94□□□□□ -1.3
UBI4YLL039C TFB4Q12004 338 aa6.94□□□□□ -1.3
UBI4YLL039C MLP2P40457 1679 aa6.93□□□□□ -1.3
UBI4YLL039C ORC6P38826 435 aa6.93□□□□□ -1.3
UBI4YLL039C MET10P39692 1035 aa6.93□□□□□ -1.3
UBI4YLL039C RTT106P40161 455 aa6.93□□□□□ -1.3
UBI4YLL039C ISM1P48526 1002 aa6.93□□□□□ -1.3
UBI4YLL039C ITT1Q04638 464 aa6.93□□□□□ -1.3
UBI4YLL039C TAF7Q05021 590 aa6.93□□□□□ -1.3
UBI4YLL039C PRT1P06103 763 aaKnown RBP6.92□□□□□ -1.3
UBI4YLL039C TUM1Q08686 304 aaKnown RBP6.92□□□□□ -1.3
UBI4YLL039C ULS1Q08562 1619 aa6.91□□□□□ -1.3
UBI4YLL039C TRK1P12685 1235 aa6.91□□□□□ -1.3
UBI4YLL039C VPS70P47161 811 aa6.91□□□□□ -1.3
UBI4YLL039C NUD1P32336 851 aa6.9□□□□□ -1.3
UBI4YLL039C YEL077CQ3E7X8 1277 aa6.9□□□□□ -1.3
UBI4YLL039C PDR15Q04182 1529 aaKnown RBP6.9□□□□□ -1.31
UBI4YLL039C COX6P00427 148 aa6.89□□□□□ -1.31
UBI4YLL039C MRF1P30775 413 aaPredicted RBP6.89□□□□□ -1.31
UBI4YLL039C PDR12Q02785 1511 aa6.88□□□□□ -1.31
UBI4YLL039C SPO14P36126 1683 aa6.87□□□□□ -1.31
UBI4YLL039C DRS2P39524 1355 aa6.87□□□□□ -1.31
UBI4YLL039C MAK21Q12176 1025 aaKnown RBP6.87□□□□□ -1.31
UBI4YLL039C MVP1P40959 511 aaKnown RBP6.86□□□□□ -1.31
UBI4YLL039C TY1A-DR4O74302 440 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms