RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C ENV9Q08651 330 aa14.01□□□□□ -0.17
YSR3YKR053C SPE2P21182 396 aa14□□□□□ -0.17
YSR3YKR053C KIP3P53086 805 aaKnown RBP13.99□□□□□ -0.17
YSR3YKR053C PSK1P31374 1356 aa13.98□□□□□ -0.17
YSR3YKR053C PRP45P28004 379 aaPredicted RBP13.97□□□□□ -0.17
YSR3YKR053C ADE6P38972 1358 aaKnown RBP13.96□□□□□ -0.18
YSR3YKR053C IMH1Q06704 911 aaKnown RBP13.95□□□□□ -0.18
YSR3YKR053C YMR074CQ04773 145 aa13.93□□□□□ -0.18
YSR3YKR053C PRP5P21372 849 aaPredicted RBP13.91□□□□□ -0.18
YSR3YKR053C YLR419WQ06698 1435 aaKnown RBP13.9□□□□□ -0.19
YSR3YKR053C SCT1P32784 759 aa13.88□□□□□ -0.19
YSR3YKR053C RRP5Q05022 1729 aaKnown RBP13.86□□□□□ -0.19
YSR3YKR053C CHZ1P40019 153 aaPredicted RBP13.85□□□□□ -0.19
YSR3YKR053C MTR4P47047 1073 aaKnown RBP13.84□□□□□ -0.19
YSR3YKR053C LEU2P04173 364 aaPredicted RBP13.83□□□□□ -0.2
YSR3YKR053C PRP43P53131 767 aaKnown RBP13.83□□□□□ -0.2
YSR3YKR053C MSB3P48566 633 aaPredicted RBP13.81□□□□□ -0.2
YSR3YKR053C ORC1P54784 914 aaPredicted RBP13.78□□□□□ -0.2
YSR3YKR053C PRI1P10363 409 aa13.77□□□□□ -0.21
YSR3YKR053C YRF1-2P40105 1681 aa13.77□□□□□ -0.21
YSR3YKR053C CSE4P36012 229 aa13.75□□□□□ -0.21
YSR3YKR053C TCB1Q12466 1186 aa13.75□□□□□ -0.21
YSR3YKR053C RSF2P46974 1380 aa13.74□□□□□ -0.21
YSR3YKR053C YML133CQ03099 1374 aa13.74□□□□□ -0.21
YSR3YKR053C YLL067CQ07888 1374 aa13.74□□□□□ -0.21
YSR3YKR053C YLL066CQ99208 1374 aa13.74□□□□□ -0.21
YSR3YKR053C BUD31P25337 157 aaPredicted RBP13.74□□□□□ -0.21
YSR3YKR053C SLM3Q12093 417 aa13.74□□□□□ -0.21
YSR3YKR053C RPS24AP0CX31 135 aaKnown RBP13.73□□□□□ -0.21
YSR3YKR053C RPS24BP0CX32 135 aaKnown RBP13.73□□□□□ -0.21
YSR3YKR053C LEU3P08638 886 aa13.72□□□□□ -0.21
YSR3YKR053C IES2P40154 320 aa13.72□□□□□ -0.21
YSR3YKR053C TY4B-HP0C2J7 1802 aa13.69□□□□□ -0.22
YSR3YKR053C TY4B-JP47024 1803 aa13.69□□□□□ -0.22
YSR3YKR053C ROM2P51862 1356 aaKnown RBP13.69□□□□□ -0.22
YSR3YKR053C FKH1P40466 484 aa13.67□□□□□ -0.22
YSR3YKR053C DOT5P40553 215 aa13.67□□□□□ -0.22
YSR3YKR053C EDE1P34216 1381 aa13.67□□□□□ -0.22
YSR3YKR053C UBP1P25037 809 aa13.65□□□□□ -0.22
YSR3YKR053C YEF3P16521 1044 aaKnown RBP13.63□□□□□ -0.23
YSR3YKR053C RPN11P43588 306 aaKnown RBP13.62□□□□□ -0.23
YSR3YKR053C XKS1P42826 600 aa13.61□□□□□ -0.23
YSR3YKR053C FOX2Q02207 900 aaKnown RBP13.61□□□□□ -0.23
YSR3YKR053C PDI1P17967 522 aaKnown RBP13.6□□□□□ -0.23
YSR3YKR053C ENP1P38333 483 aaKnown RBP13.6□□□□□ -0.23
YSR3YKR053C RTF1P53064 558 aa13.59□□□□□ -0.23
YSR3YKR053C YKL133CP36066 463 aa13.58□□□□□ -0.24
YSR3YKR053C DPS1P04802 557 aaKnown RBP13.56□□□□□ -0.24
YSR3YKR053C RTG3P38165 486 aa13.56□□□□□ -0.24
YSR3YKR053C MHP1P43638 1398 aa13.56□□□□□ -0.24
YSR3YKR053C YJL181WP46987 611 aa13.54□□□□□ -0.24
YSR3YKR053C TAP42Q04372 366 aa13.54□□□□□ -0.24
YSR3YKR053C URB1P34241 1764 aaKnown RBP13.53□□□□□ -0.24
YSR3YKR053C GRX4P32642 244 aa13.53□□□□□ -0.24
YSR3YKR053C NPR2P39923 615 aa13.53□□□□□ -0.24
YSR3YKR053C POL5P39985 1022 aaKnown RBP13.53□□□□□ -0.24
YSR3YKR053C GAS4Q08271 471 aa13.53□□□□□ -0.24
YSR3YKR053C LAM6Q08001 693 aa13.52□□□□□ -0.25
YSR3YKR053C SIR4P11978 1358 aa13.51□□□□□ -0.25
YSR3YKR053C PRP40P33203 583 aaKnown RBP13.51□□□□□ -0.25
YSR3YKR053C GTT3P39996 337 aa13.51□□□□□ -0.25
YSR3YKR053C AUS1Q08409 1394 aa13.49□□□□□ -0.25
YSR3YKR053C SEC3P33332 1336 aaKnown RBP13.49□□□□□ -0.25
YSR3YKR053C COBP00163 385 aa13.49□□□□□ -0.25
YSR3YKR053C PDS5Q04264 1277 aa13.49□□□□□ -0.25
YSR3YKR053C YKR075CP36155 307 aa13.48□□□□□ -0.25
YSR3YKR053C YBL086CP38177 466 aa13.48□□□□□ -0.25
YSR3YKR053C MEC3Q02574 474 aa13.48□□□□□ -0.25
YSR3YKR053C YRF1-4O13559 1382 aa13.46□□□□□ -0.25
YSR3YKR053C RCR1P38212 213 aa13.46□□□□□ -0.25
YSR3YKR053C APC1P53886 1748 aa13.45□□□□□ -0.26
YSR3YKR053C LYS4P49367 693 aaPredicted RBP13.45□□□□□ -0.26
YSR3YKR053C UGA2P38067 497 aa13.44□□□□□ -0.26
YSR3YKR053C ALD2P47771 506 aa13.43□□□□□ -0.26
YSR3YKR053C FRK1Q03002 865 aaPredicted RBP13.43□□□□□ -0.26
YSR3YKR053C ADE16P54113 591 aaKnown RBP13.42□□□□□ -0.26
YSR3YKR053C HIM1Q06674 414 aa13.41□□□□□ -0.26
YSR3YKR053C FKS3Q04952 1785 aa13.4□□□□□ -0.26
YSR3YKR053C SSA2P10592 639 aaKnown RBP13.39□□□□□ -0.27
YSR3YKR053C YIL177CP40434 1758 aa13.39□□□□□ -0.27
YSR3YKR053C YJL225CP40889 1758 aa13.39□□□□□ -0.27
YSR3YKR053C RPO41P13433 1351 aaKnown RBP13.38□□□□□ -0.27
YSR3YKR053C KAR2P16474 682 aaKnown RBP13.38□□□□□ -0.27
YSR3YKR053C CTH1P47976 325 aa13.38□□□□□ -0.27
YSR3YKR053C YRF1-3P0CX14 1859 aa13.37□□□□□ -0.27
YSR3YKR053C YRF1-7P0CX15 1859 aa13.37□□□□□ -0.27
YSR3YKR053C YRF1-6P53819 1859 aa13.37□□□□□ -0.27
YSR3YKR053C SPT7P35177 1332 aa13.35□□□□□ -0.27
YSR3YKR053C ATG13Q06628 738 aa13.33□□□□□ -0.28
YSR3YKR053C INP54Q08227 384 aaKnown RBP13.32□□□□□ -0.28
YSR3YKR053C BDF1P35817 686 aa13.31□□□□□ -0.28
YSR3YKR053C MSB4Q12317 492 aa13.31□□□□□ -0.28
YSR3YKR053C MLP1Q02455 1875 aaKnown RBP13.3□□□□□ -0.28
YSR3YKR053C SNF2P22082 1703 aa13.29□□□□□ -0.28
YSR3YKR053C OSM1P21375 501 aaKnown RBP13.28□□□□□ -0.28
YSR3YKR053C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.28□□□□□ -0.28not detected
YSR3YKR053C DSD1P53095 428 aa13.28□□□□□ -0.28
YSR3YKR053C CTF4Q01454 927 aa13.28□□□□□ -0.28
YSR3YKR053C GRX1P25373 110 aaKnown RBP13.26□□□□□ -0.29
YSR3YKR053C RAD4P14736 754 aa13.25□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms