RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YIL055CP40523 627 aaKnown RBP16.01■□□□□ 0.15
YKR040CYKR040C ORC1P54784 914 aaPredicted RBP16.01■□□□□ 0.15
YKR040CYKR040C ENV9Q08651 330 aa15.97■□□□□ 0.15
YKR040CYKR040C PRP45P28004 379 aaPredicted RBP15.96■□□□□ 0.15
YKR040CYKR040C GLN1P32288 370 aaKnown RBP15.96■□□□□ 0.15
YKR040CYKR040C PSK1P31374 1356 aa15.93■□□□□ 0.14
YKR040CYKR040C CHZ1P40019 153 aaPredicted RBP15.93■□□□□ 0.14
YKR040CYKR040C RRP5Q05022 1729 aaKnown RBP15.91■□□□□ 0.14
YKR040CYKR040C PRP5P21372 849 aaPredicted RBP15.88■□□□□ 0.13
YKR040CYKR040C SCT1P32784 759 aa15.87■□□□□ 0.13
YKR040CYKR040C IMH1Q06704 911 aaKnown RBP15.87■□□□□ 0.13
YKR040CYKR040C YLR419WQ06698 1435 aaKnown RBP15.86■□□□□ 0.13
YKR040CYKR040C ADE6P38972 1358 aaKnown RBP15.85■□□□□ 0.13
YKR040CYKR040C TY4B-HP0C2J7 1802 aa15.83■□□□□ 0.12
YKR040CYKR040C TY4B-JP47024 1803 aa15.83■□□□□ 0.12
YKR040CYKR040C LEU2P04173 364 aaPredicted RBP15.83■□□□□ 0.12
YKR040CYKR040C MTR4P47047 1073 aaKnown RBP15.79■□□□□ 0.12
YKR040CYKR040C YMR074CQ04773 145 aa15.79■□□□□ 0.12
YKR040CYKR040C CSE4P36012 229 aa15.78■□□□□ 0.12
YKR040CYKR040C MSB3P48566 633 aaPredicted RBP15.77■□□□□ 0.12
YKR040CYKR040C PRP43P53131 767 aaKnown RBP15.77■□□□□ 0.12
YKR040CYKR040C RPS24AP0CX31 135 aaKnown RBP15.75■□□□□ 0.11
YKR040CYKR040C RPS24BP0CX32 135 aaKnown RBP15.75■□□□□ 0.11
YKR040CYKR040C YRF1-2P40105 1681 aa15.75■□□□□ 0.11
YKR040CYKR040C TCB1Q12466 1186 aa15.71■□□□□ 0.11
YKR040CYKR040C LEU3P08638 886 aa15.69■□□□□ 0.1
YKR040CYKR040C SLM3Q12093 417 aa15.69■□□□□ 0.1
YKR040CYKR040C YML133CQ03099 1374 aa15.67■□□□□ 0.1
YKR040CYKR040C YLL067CQ07888 1374 aa15.67■□□□□ 0.1
YKR040CYKR040C YLL066CQ99208 1374 aa15.67■□□□□ 0.1
YKR040CYKR040C IES2P40154 320 aa15.67■□□□□ 0.1
YKR040CYKR040C FKH1P40466 484 aa15.67■□□□□ 0.1
YKR040CYKR040C PRI1P10363 409 aa15.64■□□□□ 0.09
YKR040CYKR040C POL5P39985 1022 aaKnown RBP15.64■□□□□ 0.09
YKR040CYKR040C RTG3P38165 486 aa15.61■□□□□ 0.09
YKR040CYKR040C RSF2P46974 1380 aa15.61■□□□□ 0.09
YKR040CYKR040C MLP1Q02455 1875 aaKnown RBP15.59■□□□□ 0.09
YKR040CYKR040C DOT5P40553 215 aa15.59■□□□□ 0.09
YKR040CYKR040C URB1P34241 1764 aaKnown RBP15.59■□□□□ 0.09
YKR040CYKR040C BUD31P25337 157 aaPredicted RBP15.58■□□□□ 0.08
YKR040CYKR040C ENP1P38333 483 aaKnown RBP15.57■□□□□ 0.08
YKR040CYKR040C RTF1P53064 558 aa15.57■□□□□ 0.08
YKR040CYKR040C PDI1P17967 522 aaKnown RBP15.56■□□□□ 0.08
YKR040CYKR040C XKS1P42826 600 aa15.56■□□□□ 0.08
YKR040CYKR040C GAS4Q08271 471 aa15.56■□□□□ 0.08
YKR040CYKR040C DPS1P04802 557 aaKnown RBP15.54■□□□□ 0.08
YKR040CYKR040C RPN11P43588 306 aaKnown RBP15.54■□□□□ 0.08
YKR040CYKR040C PDS5Q04264 1277 aa15.54■□□□□ 0.08
YKR040CYKR040C MHP1P43638 1398 aa15.53■□□□□ 0.08
YKR040CYKR040C ROM2P51862 1356 aaKnown RBP15.53■□□□□ 0.08
YKR040CYKR040C UBP1P25037 809 aa15.52■□□□□ 0.08
YKR040CYKR040C YEF3P16521 1044 aaKnown RBP15.51■□□□□ 0.07
YKR040CYKR040C YRF1-3P0CX14 1859 aa15.5■□□□□ 0.07
YKR040CYKR040C YRF1-7P0CX15 1859 aa15.5■□□□□ 0.07
YKR040CYKR040C YRF1-6P53819 1859 aa15.5■□□□□ 0.07
YKR040CYKR040C YIL177CP40434 1758 aa15.5■□□□□ 0.07
YKR040CYKR040C YJL225CP40889 1758 aa15.5■□□□□ 0.07
YKR040CYKR040C YKL133CP36066 463 aa15.5■□□□□ 0.07
YKR040CYKR040C FOX2Q02207 900 aaKnown RBP15.5■□□□□ 0.07
YKR040CYKR040C TAP42Q04372 366 aa15.48■□□□□ 0.07
YKR040CYKR040C FKS3Q04952 1785 aa15.48■□□□□ 0.07
YKR040CYKR040C GRX4P32642 244 aa15.46■□□□□ 0.07
YKR040CYKR040C YJL181WP46987 611 aa15.45■□□□□ 0.06
YKR040CYKR040C HIM1Q06674 414 aa15.44■□□□□ 0.06
YKR040CYKR040C APC1P53886 1748 aa15.43■□□□□ 0.06
YKR040CYKR040C LAM6Q08001 693 aa15.43■□□□□ 0.06
YKR040CYKR040C COBP00163 385 aa15.42■□□□□ 0.06
YKR040CYKR040C AUS1Q08409 1394 aa15.41■□□□□ 0.06
YKR040CYKR040C RCR1P38212 213 aa15.41■□□□□ 0.06
YKR040CYKR040C EDE1P34216 1381 aa15.4■□□□□ 0.06
YKR040CYKR040C NPR2P39923 615 aa15.4■□□□□ 0.06
YKR040CYKR040C PRP40P33203 583 aaKnown RBP15.39■□□□□ 0.05
YKR040CYKR040C MEC3Q02574 474 aa15.39■□□□□ 0.05
YKR040CYKR040C SEC3P33332 1336 aaKnown RBP15.39■□□□□ 0.05
YKR040CYKR040C YRF1-4O13559 1382 aa15.36■□□□□ 0.05
YKR040CYKR040C YKR075CP36155 307 aa15.36■□□□□ 0.05
YKR040CYKR040C LYS4P49367 693 aaPredicted RBP15.36■□□□□ 0.05
YKR040CYKR040C KAR2P16474 682 aaKnown RBP15.35■□□□□ 0.05
YKR040CYKR040C YBL086CP38177 466 aa15.34■□□□□ 0.05
YKR040CYKR040C SIR4P11978 1358 aa15.34■□□□□ 0.05
YKR040CYKR040C FRK1Q03002 865 aaPredicted RBP15.33■□□□□ 0.04
YKR040CYKR040C ADE16P54113 591 aaKnown RBP15.32■□□□□ 0.04
YKR040CYKR040C GTT3P39996 337 aa15.3■□□□□ 0.04
YKR040CYKR040C UGA2P38067 497 aa15.29■□□□□ 0.04
YKR040CYKR040C BUB1P41695 1021 aaKnown RBP RIP-Chip data15.28■□□□□ 0.04not detected
YKR040CYKR040C ALD2P47771 506 aa15.28■□□□□ 0.04
YKR040CYKR040C SNF2P22082 1703 aa15.27■□□□□ 0.04
YKR040CYKR040C PAP2P53632 584 aaKnown RBP15.27■□□□□ 0.04
YKR040CYKR040C NST1P53935 1240 aa15.27■□□□□ 0.04
YKR040CYKR040C ATG13Q06628 738 aa15.27■□□□□ 0.04
YKR040CYKR040C RPO41P13433 1351 aaKnown RBP15.26■□□□□ 0.03
YKR040CYKR040C TRK1P12685 1235 aa15.24■□□□□ 0.03
YKR040CYKR040C SSA2P10592 639 aaKnown RBP15.23■□□□□ 0.03
YKR040CYKR040C DSD1P53095 428 aa15.22■□□□□ 0.03
YKR040CYKR040C INP54Q08227 384 aaKnown RBP15.22■□□□□ 0.03
YKR040CYKR040C OSM1P21375 501 aaKnown RBP15.21■□□□□ 0.03
YKR040CYKR040C CTH1P47976 325 aa15.21■□□□□ 0.03
YKR040CYKR040C PSD2P53037 1138 aaKnown RBP15.21■□□□□ 0.03
YKR040CYKR040C HSP104P31539 908 aaKnown RBP15.2■□□□□ 0.02
YKR040CYKR040C MSB4Q12317 492 aa15.18■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms