RNA–Protein interactions for RNA: YKL024C

URA6, Transcript of Uridylate kinase, yeast

Gene URA6, Length 615 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA6	YKL024C	YFR006W	P43590	535 aa		12.06	□□□□□ -0.48
URA6	YKL024C	MAK10	Q02197	733 aa		12.06	□□□□□ -0.48
URA6	YKL024C	RCM1	P53972	490 aa		12	□□□□□ -0.49
URA6	YKL024C	CFT1	Q06632	1357 aa	Known RBP	12	□□□□□ -0.49
URA6	YKL024C	RPP0	P05317	312 aa	Known RBP	11.97	□□□□□ -0.49
URA6	YKL024C	PSK1	P31374	1356 aa		11.96	□□□□□ -0.49
URA6	YKL024C	TRK1	P12685	1235 aa		11.95	□□□□□ -0.5
URA6	YKL024C	PPH3	P32345	308 aa		11.95	□□□□□ -0.5
URA6	YKL024C	YML133C	Q03099	1374 aa		11.94	□□□□□ -0.5
URA6	YKL024C	YLL067C	Q07888	1374 aa		11.94	□□□□□ -0.5
URA6	YKL024C	YLL066C	Q99208	1374 aa		11.94	□□□□□ -0.5
URA6	YKL024C	YEF3	P16521	1044 aa	Known RBP	11.94	□□□□□ -0.5
URA6	YKL024C	VPS27	P40343	622 aa	Known RBP	11.94	□□□□□ -0.5
URA6	YKL024C	IOC4	Q04213	475 aa		11.94	□□□□□ -0.5
URA6	YKL024C	CDC45	Q08032	650 aa		11.94	□□□□□ -0.5
URA6	YKL024C	YNR029C	P53729	429 aa	Known RBP	11.93	□□□□□ -0.5
URA6	YKL024C	LEU2	P04173	364 aa	Predicted RBP	11.91	□□□□□ -0.5
URA6	YKL024C	CPS1	P27614	576 aa		11.91	□□□□□ -0.5
URA6	YKL024C	YDL144C	Q07589	356 aa		11.91	□□□□□ -0.5
URA6	YKL024C	KAR2	P16474	682 aa	Known RBP	11.9	□□□□□ -0.5
URA6	YKL024C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.89	□□□□□ -0.51
URA6	YKL024C	PDI1	P17967	522 aa	Known RBP	11.88	□□□□□ -0.51
URA6	YKL024C	YMR196W	Q04336	1088 aa		11.88	□□□□□ -0.51
URA6	YKL024C	MTR4	P47047	1073 aa	Known RBP	11.87	□□□□□ -0.51
URA6	YKL024C	RTF1	P53064	558 aa		11.87	□□□□□ -0.51
URA6	YKL024C	USO1	P25386	1790 aa		11.87	□□□□□ -0.51
URA6	YKL024C	TAP42	Q04372	366 aa		11.86	□□□□□ -0.51
URA6	YKL024C	RVB2	Q12464	471 aa	Known RBP	11.86	□□□□□ -0.51
URA6	YKL024C	SNF2	P22082	1703 aa		11.86	□□□□□ -0.51
URA6	YKL024C	FUN12	P39730	1002 aa	Known RBP	11.84	□□□□□ -0.51
URA6	YKL024C	RTR1	P40084	226 aa	Predicted RBP	11.84	□□□□□ -0.51
URA6	YKL024C	MPP10	P47083	593 aa	Known RBP	11.84	□□□□□ -0.51
URA6	YKL024C	PAP2	P53632	584 aa	Known RBP	11.84	□□□□□ -0.51
URA6	YKL024C	HIM1	Q06674	414 aa		11.82	□□□□□ -0.52
URA6	YKL024C	GRX4	P32642	244 aa		11.81	□□□□□ -0.52
URA6	YKL024C	CSE4	P36012	229 aa		11.81	□□□□□ -0.52
URA6	YKL024C	YRB30	P53107	440 aa	Predicted RBP	11.81	□□□□□ -0.52
URA6	YKL024C	SUI2	P20459	304 aa	Known RBP	11.79	□□□□□ -0.52
URA6	YKL024C	RRP46	P53256	223 aa	Predicted RBP	11.79	□□□□□ -0.52
URA6	YKL024C	RPS24A	P0CX31	135 aa	Known RBP	11.78	□□□□□ -0.52
URA6	YKL024C	RPS24B	P0CX32	135 aa	Known RBP	11.78	□□□□□ -0.52
URA6	YKL024C	FPR3	P38911	411 aa	Known RBP	11.78	□□□□□ -0.52
URA6	YKL024C	GAS4	Q08271	471 aa		11.76	□□□□□ -0.53
URA6	YKL024C	AUS1	Q08409	1394 aa		11.76	□□□□□ -0.53
URA6	YKL024C	PRP43	P53131	767 aa	Known RBP	11.75	□□□□□ -0.53
URA6	YKL024C	TFA1	P36100	482 aa		11.74	□□□□□ -0.53
URA6	YKL024C	SAP155	P43612	1002 aa		11.74	□□□□□ -0.53
URA6	YKL024C	PRD1	P25375	712 aa		11.73	□□□□□ -0.53
URA6	YKL024C	ADE6	P38972	1358 aa	Known RBP	11.73	□□□□□ -0.53
URA6	YKL024C	DPS1	P04802	557 aa	Known RBP	11.72	□□□□□ -0.53
URA6	YKL024C	THI12	P42883	340 aa		11.72	□□□□□ -0.53
URA6	YKL024C	THI5	P43534	340 aa		11.72	□□□□□ -0.53
URA6	YKL024C	THI11	P47183	340 aa		11.72	□□□□□ -0.53
URA6	YKL024C	THI13	Q07748	340 aa		11.72	□□□□□ -0.53
URA6	YKL024C	TPD3	P31383	635 aa		11.71	□□□□□ -0.53
URA6	YKL024C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
URA6	YKL024C	THI22	Q06490	572 aa		11.7	□□□□□ -0.54
URA6	YKL024C	RPO41	P13433	1351 aa	Known RBP	11.69	□□□□□ -0.54
URA6	YKL024C	RAD2	P07276	1031 aa		11.68	□□□□□ -0.54
URA6	YKL024C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.67	□□□□□ -0.54	not detected
URA6	YKL024C	TY4B-H	P0C2J7	1802 aa		11.65	□□□□□ -0.54
URA6	YKL024C	TY4B-J	P47024	1803 aa		11.65	□□□□□ -0.54
URA6	YKL024C	AKL1	P38080	1108 aa	Known RBP	11.63	□□□□□ -0.55
URA6	YKL024C	HEF3	P53978	1044 aa	Known RBP	11.63	□□□□□ -0.55
URA6	YKL024C	RTT109	Q07794	436 aa		11.63	□□□□□ -0.55
URA6	YKL024C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.62	□□□□□ -0.55	not detected
URA6	YKL024C	DAL5	P15365	543 aa		11.61	□□□□□ -0.55
URA6	YKL024C	RPC31	P17890	251 aa		11.61	□□□□□ -0.55
URA6	YKL024C	MAK21	Q12176	1025 aa	Known RBP	11.61	□□□□□ -0.55
URA6	YKL024C	APC1	P53886	1748 aa		11.58	□□□□□ -0.56
URA6	YKL024C	YIL092W	P40497	633 aa		11.58	□□□□□ -0.56
URA6	YKL024C	SIR4	P11978	1358 aa		11.57	□□□□□ -0.56
URA6	YKL024C	YRF1-2	P40105	1681 aa		11.57	□□□□□ -0.56
URA6	YKL024C	PRP5	P21372	849 aa	Predicted RBP	11.57	□□□□□ -0.56
URA6	YKL024C	DSD1	P53095	428 aa		11.57	□□□□□ -0.56
URA6	YKL024C	PRP45	P28004	379 aa	Predicted RBP	11.56	□□□□□ -0.56
URA6	YKL024C	ZDS1	P50111	915 aa	Known RBP	11.55	□□□□□ -0.56
URA6	YKL024C	YNL050C	P53952	270 aa		11.55	□□□□□ -0.56
URA6	YKL024C	RRP5	Q05022	1729 aa	Known RBP	11.55	□□□□□ -0.56
URA6	YKL024C	YRF1-4	O13559	1382 aa		11.54	□□□□□ -0.56
URA6	YKL024C	HSP104	P31539	908 aa	Known RBP	11.53	□□□□□ -0.56
URA6	YKL024C	RRT14	P40470	206 aa		11.53	□□□□□ -0.56
URA6	YKL024C	GYP7	P48365	746 aa		11.53	□□□□□ -0.56
URA6	YKL024C	YIL177C	P40434	1758 aa		11.53	□□□□□ -0.56
URA6	YKL024C	YJL225C	P40889	1758 aa		11.53	□□□□□ -0.56
URA6	YKL024C	NTH2	P35172	780 aa		11.52	□□□□□ -0.57
URA6	YKL024C	MAM1	P40065	302 aa		11.52	□□□□□ -0.57
URA6	YKL024C	SLM3	Q12093	417 aa		11.52	□□□□□ -0.57
URA6	YKL024C	POL32	P47110	350 aa		11.51	□□□□□ -0.57
URA6	YKL024C	FKS3	Q04952	1785 aa		11.51	□□□□□ -0.57
URA6	YKL024C	AOS1	Q06624	347 aa		11.5	□□□□□ -0.57
URA6	YKL024C	URB1	P34241	1764 aa	Known RBP	11.49	□□□□□ -0.57
URA6	YKL024C	CTF4	Q01454	927 aa		11.49	□□□□□ -0.57
URA6	YKL024C	PUF6	Q04373	656 aa	Known RBP	11.49	□□□□□ -0.57
URA6	YKL024C	YBR287W	P38355	427 aa		11.48	□□□□□ -0.57
URA6	YKL024C	MSB3	P48566	633 aa	Predicted RBP	11.48	□□□□□ -0.57
URA6	YKL024C	PTP3	P40048	928 aa		11.47	□□□□□ -0.57
URA6	YKL024C	TCB1	Q12466	1186 aa		11.47	□□□□□ -0.57
URA6	YKL024C	XKS1	P42826	600 aa		11.45	□□□□□ -0.58
URA6	YKL024C	SRT1	Q03175	343 aa		11.45	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms