RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C TY4B-HP0C2J7 1802 aa9.53□□□□□ -0.88
SSC1YJR045C TY4B-JP47024 1803 aa9.53□□□□□ -0.88
SSC1YJR045C NAP1P25293 417 aaKnown RBP9.52□□□□□ -0.89
SSC1YJR045C TAF5P38129 798 aa9.52□□□□□ -0.89
SSC1YJR045C TAF8Q03750 510 aa9.51□□□□□ -0.89
SSC1YJR045C ESL2P36168 1195 aa9.5□□□□□ -0.89
SSC1YJR045C ENT1Q12518 454 aa9.5□□□□□ -0.89
SSC1YJR045C RCM1P53972 490 aa9.48□□□□□ -0.89
SSC1YJR045C CPS1P27614 576 aa9.47□□□□□ -0.89
SSC1YJR045C ENV9Q08651 330 aa9.47□□□□□ -0.89
SSC1YJR045C YPR148CQ06523 435 aa9.45□□□□□ -0.9
SSC1YJR045C PPH3P32345 308 aa9.44□□□□□ -0.9
SSC1YJR045C IMH1Q06704 911 aaKnown RBP9.44□□□□□ -0.9
SSC1YJR045C AVT3P36062 692 aa9.43□□□□□ -0.9
SSC1YJR045C YMR074CQ04773 145 aa9.42□□□□□ -0.9
SSC1YJR045C PRP45P28004 379 aaPredicted RBP9.41□□□□□ -0.9
SSC1YJR045C PSK1P31374 1356 aa9.39□□□□□ -0.91
SSC1YJR045C URB1P34241 1764 aaKnown RBP9.38□□□□□ -0.91
SSC1YJR045C ADE6P38972 1358 aaKnown RBP9.38□□□□□ -0.91
SSC1YJR045C SPE2P21182 396 aa9.37□□□□□ -0.91
SSC1YJR045C KIP3P53086 805 aaKnown RBP9.37□□□□□ -0.91
SSC1YJR045C PRP5P21372 849 aaPredicted RBP9.36□□□□□ -0.91
SSC1YJR045C SIS2P36024 562 aa9.36□□□□□ -0.91
SSC1YJR045C FKS3Q04952 1785 aa9.35□□□□□ -0.91
SSC1YJR045C YLR419WQ06698 1435 aaKnown RBP9.34□□□□□ -0.91
SSC1YJR045C PRI1P10363 409 aa9.33□□□□□ -0.92
SSC1YJR045C BUD31P25337 157 aaPredicted RBP9.32□□□□□ -0.92
SSC1YJR045C MSB3P48566 633 aaPredicted RBP9.32□□□□□ -0.92
SSC1YJR045C YIL177CP40434 1758 aa9.32□□□□□ -0.92
SSC1YJR045C YJL225CP40889 1758 aa9.32□□□□□ -0.92
SSC1YJR045C ENP1P38333 483 aaKnown RBP9.3□□□□□ -0.92
SSC1YJR045C ORC1P54784 914 aaPredicted RBP9.29□□□□□ -0.92
SSC1YJR045C YRF1-3P0CX14 1859 aa9.28□□□□□ -0.92
SSC1YJR045C YRF1-7P0CX15 1859 aa9.28□□□□□ -0.92
SSC1YJR045C YRF1-6P53819 1859 aa9.28□□□□□ -0.92
SSC1YJR045C LEU3P08638 886 aa9.28□□□□□ -0.92
SSC1YJR045C CHZ1P40019 153 aaPredicted RBP9.27□□□□□ -0.93
SSC1YJR045C RSF2P46974 1380 aa9.27□□□□□ -0.93
SSC1YJR045C CSE4P36012 229 aa9.26□□□□□ -0.93
SSC1YJR045C IES2P40154 320 aa9.26□□□□□ -0.93
SSC1YJR045C TCB1Q12466 1186 aa9.26□□□□□ -0.93
SSC1YJR045C LEU2P04173 364 aaPredicted RBP9.25□□□□□ -0.93
SSC1YJR045C MTR4P47047 1073 aaKnown RBP9.25□□□□□ -0.93
SSC1YJR045C PRP43P53131 767 aaKnown RBP9.25□□□□□ -0.93
SSC1YJR045C YML133CQ03099 1374 aa9.25□□□□□ -0.93
SSC1YJR045C YLL067CQ07888 1374 aa9.25□□□□□ -0.93
SSC1YJR045C YLL066CQ99208 1374 aa9.25□□□□□ -0.93
SSC1YJR045C APC1P53886 1748 aa9.25□□□□□ -0.93
SSC1YJR045C RPS24AP0CX31 135 aaKnown RBP9.24□□□□□ -0.93
SSC1YJR045C RPS24BP0CX32 135 aaKnown RBP9.24□□□□□ -0.93
SSC1YJR045C SLM3Q12093 417 aa9.24□□□□□ -0.93
SSC1YJR045C DIP2Q12220 943 aaPredicted RBP9.24□□□□□ -0.93
SSC1YJR045C ROM2P51862 1356 aaKnown RBP9.23□□□□□ -0.93
SSC1YJR045C MLP1Q02455 1875 aaKnown RBP9.23□□□□□ -0.93
SSC1YJR045C UBP1P25037 809 aa9.23□□□□□ -0.93
SSC1YJR045C DOT5P40553 215 aa9.23□□□□□ -0.93
SSC1YJR045C RPN11P43588 306 aaKnown RBP9.22□□□□□ -0.93
SSC1YJR045C DMA1P38823 416 aa9.21□□□□□ -0.94
SSC1YJR045C FOX2Q02207 900 aaKnown RBP9.2□□□□□ -0.94
SSC1YJR045C EDE1P34216 1381 aa9.19□□□□□ -0.94
SSC1YJR045C SCT1P32784 759 aa9.17□□□□□ -0.94
SSC1YJR045C XKS1P42826 600 aa9.17□□□□□ -0.94
SSC1YJR045C SNF2P22082 1703 aa9.16□□□□□ -0.94
SSC1YJR045C YKL133CP36066 463 aa9.15□□□□□ -0.95
SSC1YJR045C YBL086CP38177 466 aa9.14□□□□□ -0.95
SSC1YJR045C LEO1P38439 464 aa9.14□□□□□ -0.95
SSC1YJR045C NPR2P39923 615 aa9.14□□□□□ -0.95
SSC1YJR045C YJL181WP46987 611 aa9.13□□□□□ -0.95
SSC1YJR045C YEF3P16521 1044 aaKnown RBP9.13□□□□□ -0.95
SSC1YJR045C FKH1P40466 484 aa9.13□□□□□ -0.95
SSC1YJR045C YRF1-4O13559 1382 aa9.12□□□□□ -0.95
SSC1YJR045C DPS1P04802 557 aaKnown RBP9.12□□□□□ -0.95
SSC1YJR045C AAD16Q02895 342 aa9.12□□□□□ -0.95
SSC1YJR045C LAM6Q08001 693 aa9.12□□□□□ -0.95
SSC1YJR045C GAS4Q08271 471 aa9.12□□□□□ -0.95
SSC1YJR045C ISW2Q08773 1120 aa9.12□□□□□ -0.95
SSC1YJR045C COBP00163 385 aa9.11□□□□□ -0.95
SSC1YJR045C PRP40P33203 583 aaKnown RBP9.11□□□□□ -0.95
SSC1YJR045C LYS4P49367 693 aaPredicted RBP9.11□□□□□ -0.95
SSC1YJR045C RIM15P43565 1770 aa9.1□□□□□ -0.95
SSC1YJR045C PDI1P17967 522 aaKnown RBP9.1□□□□□ -0.95
SSC1YJR045C YKR075CP36155 307 aa9.1□□□□□ -0.95
SSC1YJR045C RTG3P38165 486 aa9.09□□□□□ -0.95
SSC1YJR045C RTF1P53064 558 aa9.09□□□□□ -0.95
SSC1YJR045C PRY3P47033 881 aa9.08□□□□□ -0.96
SSC1YJR045C SIR4P11978 1358 aa9.08□□□□□ -0.96
SSC1YJR045C GTT3P39996 337 aa9.08□□□□□ -0.96
SSC1YJR045C AUS1Q08409 1394 aa9.08□□□□□ -0.96
SSC1YJR045C UGA2P38067 497 aa9.07□□□□□ -0.96
SSC1YJR045C SSA2P10592 639 aaKnown RBP9.06□□□□□ -0.96
SSC1YJR045C RCR1P38212 213 aa9.06□□□□□ -0.96
SSC1YJR045C RPG1P38249 964 aaKnown RBP9.06□□□□□ -0.96
SSC1YJR045C ALD2P47771 506 aa9.06□□□□□ -0.96
SSC1YJR045C FRK1Q03002 865 aaPredicted RBP9.06□□□□□ -0.96
SSC1YJR045C SPT7P35177 1332 aa9.05□□□□□ -0.96
SSC1YJR045C CTH1P47976 325 aa9.05□□□□□ -0.96
SSC1YJR045C SEC3P33332 1336 aaKnown RBP9.04□□□□□ -0.96
SSC1YJR045C POL5P39985 1022 aaKnown RBP9.04□□□□□ -0.96
SSC1YJR045C MEC3Q02574 474 aa9.04□□□□□ -0.96
SSC1YJR045C MHP1P43638 1398 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms