RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W YKR023WP36119 530 aaKnown RBP8.41□□□□□ -1.06
LCB3YJL134W TAF5P38129 798 aa8.41□□□□□ -1.06
LCB3YJL134W ORC1P54784 914 aaPredicted RBP8.41□□□□□ -1.06
LCB3YJL134W YCK3P39962 524 aa8.4□□□□□ -1.06
LCB3YJL134W ESL2P36168 1195 aa8.39□□□□□ -1.07
LCB3YJL134W TYS1P36421 394 aaKnown RBP8.39□□□□□ -1.07
LCB3YJL134W RSM7P47150 247 aa8.39□□□□□ -1.07
LCB3YJL134W SPT7P35177 1332 aa8.38□□□□□ -1.07
LCB3YJL134W YLR419WQ06698 1435 aaKnown RBP8.37□□□□□ -1.07
LCB3YJL134W ENP1P38333 483 aaKnown RBP8.36□□□□□ -1.07
LCB3YJL134W NSR1P27476 414 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
LCB3YJL134W THI12P42883 340 aa8.34□□□□□ -1.07
LCB3YJL134W THI5P43534 340 aa8.34□□□□□ -1.07
LCB3YJL134W THI11P47183 340 aa8.34□□□□□ -1.07
LCB3YJL134W KIP3P53086 805 aaKnown RBP8.34□□□□□ -1.07
LCB3YJL134W THI13Q07748 340 aa8.34□□□□□ -1.07
LCB3YJL134W USO1P25386 1790 aa8.34□□□□□ -1.07
LCB3YJL134W SCT1P32784 759 aa8.33□□□□□ -1.08
LCB3YJL134W BCK1Q01389 1478 aa8.32□□□□□ -1.08
LCB3YJL134W RAD9P14737 1309 aa8.29□□□□□ -1.08
LCB3YJL134W SPE2P21182 396 aa8.29□□□□□ -1.08
LCB3YJL134W NAP1P25293 417 aaKnown RBP8.28□□□□□ -1.08
LCB3YJL134W ALD4P46367 519 aaKnown RBP8.28□□□□□ -1.08
LCB3YJL134W PDS5Q04264 1277 aa8.28□□□□□ -1.08
LCB3YJL134W PSD2P53037 1138 aaKnown RBP8.27□□□□□ -1.09
LCB3YJL134W TAF8Q03750 510 aa8.27□□□□□ -1.09
LCB3YJL134W MRPL32P25348 183 aa8.26□□□□□ -1.09
LCB3YJL134W CAB1Q04430 367 aa8.26□□□□□ -1.09
LCB3YJL134W TFC8Q12308 588 aa8.26□□□□□ -1.09
LCB3YJL134W HAA1Q12753 694 aaKnown RBP8.26□□□□□ -1.09
LCB3YJL134W CST9Q06032 482 aa8.25□□□□□ -1.09
LCB3YJL134W MRX12P47084 519 aa8.24□□□□□ -1.09
LCB3YJL134W KRE5P22023 1365 aa8.22□□□□□ -1.09
LCB3YJL134W HOP09932 586 aa8.22□□□□□ -1.09
LCB3YJL134W MLP1Q02455 1875 aaKnown RBP8.19□□□□□ -1.1
LCB3YJL134W AI2P03876 854 aa8.19□□□□□ -1.1
LCB3YJL134W RPN1P38764 993 aaKnown RBP8.19□□□□□ -1.1
LCB3YJL134W RIA1P53893 1110 aa8.19□□□□□ -1.1
LCB3YJL134W CHZ1P40019 153 aaPredicted RBP8.18□□□□□ -1.1
LCB3YJL134W CFT1Q06632 1357 aaKnown RBP8.18□□□□□ -1.1
LCB3YJL134W GLN1P32288 370 aaKnown RBP8.16□□□□□ -1.1
LCB3YJL134W RTG3P38165 486 aa8.16□□□□□ -1.1
LCB3YJL134W NST1P53935 1240 aa8.16□□□□□ -1.1
LCB3YJL134W FKH1P40466 484 aa8.14□□□□□ -1.11
LCB3YJL134W PSK1P31374 1356 aa8.13□□□□□ -1.11
LCB3YJL134W PRS1P32895 427 aaKnown RBP8.13□□□□□ -1.11
LCB3YJL134W NOP2P40991 618 aaKnown RBP8.13□□□□□ -1.11
LCB3YJL134W BBC1P47068 1157 aa8.13□□□□□ -1.11
LCB3YJL134W YML133CQ03099 1374 aa8.12□□□□□ -1.11
LCB3YJL134W YLL067CQ07888 1374 aa8.12□□□□□ -1.11
LCB3YJL134W YLL066CQ99208 1374 aa8.12□□□□□ -1.11
LCB3YJL134W DCD1P06773 312 aa8.12□□□□□ -1.11
LCB3YJL134W RCM1P53972 490 aa8.12□□□□□ -1.11
LCB3YJL134W YNR029CP53729 429 aaKnown RBP8.1□□□□□ -1.11
LCB3YJL134W PPH3P32345 308 aa8.08□□□□□ -1.12
LCB3YJL134W RAM2P29703 316 aa8.07□□□□□ -1.12
LCB3YJL134W SPB4P25808 606 aaPredicted RBP8.06□□□□□ -1.12
LCB3YJL134W CPS1P27614 576 aa8.06□□□□□ -1.12
LCB3YJL134W CDC27P38042 758 aa8.06□□□□□ -1.12
LCB3YJL134W SET1P38827 1080 aaKnown RBP8.06□□□□□ -1.12
LCB3YJL134W SNF2P22082 1703 aa8.06□□□□□ -1.12
LCB3YJL134W APP1P53933 587 aa8.05□□□□□ -1.12
LCB3YJL134W YMR074CQ04773 145 aa8.05□□□□□ -1.12
LCB3YJL134W TRK1P12685 1235 aa8.04□□□□□ -1.12
LCB3YJL134W YEF3P16521 1044 aaKnown RBP8.04□□□□□ -1.12
LCB3YJL134W PDI1P17967 522 aaKnown RBP8.04□□□□□ -1.12
LCB3YJL134W YPR148CQ06523 435 aa8.04□□□□□ -1.12
LCB3YJL134W RPP0P05317 312 aaKnown RBP8.03□□□□□ -1.12
LCB3YJL134W KAR2P16474 682 aaKnown RBP8.03□□□□□ -1.12
LCB3YJL134W BCH2P36122 765 aa8.03□□□□□ -1.12
LCB3YJL134W DMA2P53924 522 aa8.03□□□□□ -1.12
LCB3YJL134W LEU2P04173 364 aaPredicted RBP8.02□□□□□ -1.13
LCB3YJL134W MTR4P47047 1073 aaKnown RBP8.02□□□□□ -1.13
LCB3YJL134W IOC4Q04213 475 aa8.02□□□□□ -1.13
LCB3YJL134W RTF1P53064 558 aa8.01□□□□□ -1.13
LCB3YJL134W TAP42Q04372 366 aa8.01□□□□□ -1.13
LCB3YJL134W YDL144CQ07589 356 aa8.01□□□□□ -1.13
LCB3YJL134W CDC45Q08032 650 aa8.01□□□□□ -1.13
LCB3YJL134W VPS27P40343 622 aaKnown RBP8□□□□□ -1.13
LCB3YJL134W VPS70P47161 811 aa8□□□□□ -1.13
LCB3YJL134W ADE6P38972 1358 aaKnown RBP7.98□□□□□ -1.13
LCB3YJL134W GRX4P32642 244 aa7.98□□□□□ -1.13
LCB3YJL134W ENT1Q12518 454 aa7.98□□□□□ -1.13
LCB3YJL134W AUS1Q08409 1394 aa7.97□□□□□ -1.13
LCB3YJL134W CSE4P36012 229 aa7.97□□□□□ -1.13
LCB3YJL134W PAP2P53632 584 aaKnown RBP7.97□□□□□ -1.13
LCB3YJL134W MRM1P25270 412 aa7.96□□□□□ -1.14
LCB3YJL134W RTR1P40084 226 aaPredicted RBP7.96□□□□□ -1.14
LCB3YJL134W MPP10P47083 593 aaKnown RBP7.96□□□□□ -1.14
LCB3YJL134W TY4B-HP0C2J7 1802 aa7.95□□□□□ -1.14
LCB3YJL134W TY4B-JP47024 1803 aa7.95□□□□□ -1.14
LCB3YJL134W RPS24AP0CX31 135 aaKnown RBP7.95□□□□□ -1.14
LCB3YJL134W RPS24BP0CX32 135 aaKnown RBP7.95□□□□□ -1.14
LCB3YJL134W EPS1P40557 701 aa7.95□□□□□ -1.14
LCB3YJL134W HIM1Q06674 414 aa7.95□□□□□ -1.14
LCB3YJL134W IMH1Q06704 911 aaKnown RBP7.95□□□□□ -1.14
LCB3YJL134W ENV9Q08651 330 aa7.95□□□□□ -1.14
LCB3YJL134W PRP43P53131 767 aaKnown RBP7.94□□□□□ -1.14
LCB3YJL134W RRP46P53256 223 aaPredicted RBP7.94□□□□□ -1.14
LCB3YJL134W RVB2Q12464 471 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms