RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C CST9Q06032 482 aa6.09□□□□□ -1.43
SGN1YIR001C TFG1P41895 735 aaPredicted RBP6.08□□□□□ -1.44
SGN1YIR001C SNT2P53127 1403 aa6.08□□□□□ -1.44
SGN1YIR001C SNQ2P32568 1501 aaKnown RBP6.06□□□□□ -1.44
SGN1YIR001C YOR093CQ12275 1648 aa6.06□□□□□ -1.44
SGN1YIR001C STH1P32597 1359 aa6.06□□□□□ -1.44
SGN1YIR001C DPS1P04802 557 aaKnown RBP6.05□□□□□ -1.44
SGN1YIR001C RTG3P38165 486 aa6.05□□□□□ -1.44
SGN1YIR001C PRE3P38624 215 aa6.05□□□□□ -1.44
SGN1YIR001C SET4P42948 560 aa6.05□□□□□ -1.44
SGN1YIR001C YOL036WQ08206 761 aa6.04□□□□□ -1.44
SGN1YIR001C YTA7P40340 1379 aa6.03□□□□□ -1.44
SGN1YIR001C MLP2P40457 1679 aa6.02□□□□□ -1.45
SGN1YIR001C PDR10P51533 1564 aa6.01□□□□□ -1.45
SGN1YIR001C PDR12Q02785 1511 aa5.99□□□□□ -1.45
SGN1YIR001C IQG1Q12280 1495 aa5.99□□□□□ -1.45
SGN1YIR001C VRP1P37370 817 aa5.99□□□□□ -1.45
SGN1YIR001C YMR1P47147 688 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
SGN1YIR001C BUD3P25558 1636 aa5.99□□□□□ -1.45
SGN1YIR001C TRM3Q07527 1436 aa5.98□□□□□ -1.45
SGN1YIR001C NUP157P40064 1391 aaKnown RBP5.97□□□□□ -1.45
SGN1YIR001C GDB1Q06625 1536 aa5.96□□□□□ -1.46
SGN1YIR001C VPS29P38759 282 aa5.96□□□□□ -1.46
SGN1YIR001C YDL129WQ07555 291 aa5.96□□□□□ -1.46
SGN1YIR001C SEC7P11075 2009 aaKnown RBP5.95□□□□□ -1.46
SGN1YIR001C SRC1Q03707 834 aa5.95□□□□□ -1.46
SGN1YIR001C CHC1P22137 1653 aaKnown RBP5.94□□□□□ -1.46
SGN1YIR001C DNF3Q12674 1656 aa5.92□□□□□ -1.46
SGN1YIR001C DBP1P24784 617 aaKnown RBP5.92□□□□□ -1.46
SGN1YIR001C DAN4P47179 1161 aa5.92□□□□□ -1.46
SGN1YIR001C PDR15Q04182 1529 aaKnown RBP5.92□□□□□ -1.46
SGN1YIR001C RCR1P38212 213 aa5.9□□□□□ -1.46
SGN1YIR001C USO1P25386 1790 aa5.9□□□□□ -1.47
SGN1YIR001C SAS10Q12136 610 aaPredicted RBP5.89□□□□□ -1.47
SGN1YIR001C ARO1P08566 1588 aaKnown RBP5.89□□□□□ -1.47
SGN1YIR001C STS1P38637 319 aa5.88□□□□□ -1.47
SGN1YIR001C YAP3P38749 330 aa5.88□□□□□ -1.47
SGN1YIR001C MAK11P20484 414 aaKnown RBP5.87□□□□□ -1.47
SGN1YIR001C JIP4Q03361 876 aa5.87□□□□□ -1.47
SGN1YIR001C TAF7Q05021 590 aa5.87□□□□□ -1.47
SGN1YIR001C IFH1P39520 1085 aa5.86□□□□□ -1.47
SGN1YIR001C VMA1P17255 1071 aaKnown RBP5.85□□□□□ -1.47
SGN1YIR001C RAM2P29703 316 aa5.85□□□□□ -1.47
SGN1YIR001C MAK10Q02197 733 aa5.84□□□□□ -1.47
SGN1YIR001C SAM3Q08986 587 aa5.84□□□□□ -1.47
SGN1YIR001C CKB1P43639 278 aa5.82□□□□□ -1.48
SGN1YIR001C URN1Q06525 465 aaKnown RBP5.82□□□□□ -1.48
SGN1YIR001C BNR1P40450 1375 aa5.8□□□□□ -1.48
SGN1YIR001C YBT1P32386 1661 aa5.8□□□□□ -1.48
SGN1YIR001C NOP53Q12080 455 aaKnown RBP5.8□□□□□ -1.48
SGN1YIR001C TY3B-GQ99315 1547 aa5.79□□□□□ -1.48
SGN1YIR001C CAT8P39113 1433 aa5.79□□□□□ -1.48
SGN1YIR001C COQ8P27697 501 aa5.75□□□□□ -1.49
SGN1YIR001C YDR344CQ05510 147 aa5.75□□□□□ -1.49
SGN1YIR001C GYP5Q12344 894 aa5.75□□□□□ -1.49
SGN1YIR001C GEA1P47102 1408 aaPredicted RBP5.74□□□□□ -1.49
SGN1YIR001C YSP2Q06681 1438 aa5.74□□□□□ -1.49
SGN1YIR001C YMR196WQ04336 1088 aa5.73□□□□□ -1.49
SGN1YIR001C GRE2Q12068 342 aaKnown RBP5.73□□□□□ -1.49
SGN1YIR001C TY1B-NL2Q99337 1749 aaKnown RBP5.73□□□□□ -1.49
SGN1YIR001C PTC3P34221 468 aaKnown RBP5.72□□□□□ -1.49
SGN1YIR001C ELP4Q02884 456 aaKnown RBP5.72□□□□□ -1.49
SGN1YIR001C HTA1P04911 132 aaKnown RBP5.71□□□□□ -1.5
SGN1YIR001C HTA2P04912 132 aa5.71□□□□□ -1.5
SGN1YIR001C THI12P42883 340 aa5.71□□□□□ -1.5
SGN1YIR001C THI5P43534 340 aa5.71□□□□□ -1.5
SGN1YIR001C THI11P47183 340 aa5.71□□□□□ -1.5
SGN1YIR001C ATH1P48016 1211 aa5.71□□□□□ -1.5
SGN1YIR001C THI13Q07748 340 aa5.71□□□□□ -1.5
SGN1YIR001C GUT1P32190 709 aa5.7□□□□□ -1.5
SGN1YIR001C EDS1P38073 919 aa5.7□□□□□ -1.5
SGN1YIR001C PTC4P38089 393 aa5.7□□□□□ -1.5
SGN1YIR001C IPL1P38991 367 aa5.69□□□□□ -1.5
SGN1YIR001C SET1P38827 1080 aaKnown RBP5.68□□□□□ -1.5
SGN1YIR001C NUP188P52593 1655 aaKnown RBP5.68□□□□□ -1.5
SGN1YIR001C IML1P47170 1584 aa5.67□□□□□ -1.5
SGN1YIR001C DCW1P36091 449 aa5.66□□□□□ -1.5
SGN1YIR001C YEL023CP39992 682 aa5.65□□□□□ -1.5
SGN1YIR001C YPL062WQ02781 134 aa5.65□□□□□ -1.5
SGN1YIR001C BUD21Q08492 214 aaPredicted RBP5.65□□□□□ -1.5
SGN1YIR001C TYS1P36421 394 aaKnown RBP5.64□□□□□ -1.51
SGN1YIR001C SRB8P25648 1427 aa5.64□□□□□ -1.51
SGN1YIR001C HAP1P0CE41 1502 aa5.63□□□□□ -1.51
SGN1YIR001C GLN1P32288 370 aaKnown RBP5.61□□□□□ -1.51
SGN1YIR001C VMR1P38735 1592 aa5.61□□□□□ -1.51
SGN1YIR001C DMA1P38823 416 aa5.59□□□□□ -1.51
SGN1YIR001C YPR148CQ06523 435 aa5.59□□□□□ -1.51
SGN1YIR001C PML39Q03760 334 aa5.58□□□□□ -1.52
SGN1YIR001C AI4P03878 556 aa5.57□□□□□ -1.52
SGN1YIR001C ARH1P48360 493 aa5.57□□□□□ -1.52
SGN1YIR001C MPH3P0CE00 602 aa5.56□□□□□ -1.52
SGN1YIR001C YGR273CP53329 174 aa5.56□□□□□ -1.52
SGN1YIR001C APP1P53933 587 aa5.56□□□□□ -1.52
SGN1YIR001C NST1P53935 1240 aa5.56□□□□□ -1.52
SGN1YIR001C PDR5P33302 1511 aaKnown RBP5.54□□□□□ -1.52
SGN1YIR001C SOL3P38858 249 aa5.54□□□□□ -1.52
SGN1YIR001C MRX12P47084 519 aa5.53□□□□□ -1.52
SGN1YIR001C SPT23P35210 1082 aa5.52□□□□□ -1.53
SGN1YIR001C RAS1P01119 309 aa5.51□□□□□ -1.53
SGN1YIR001C RIA1P53893 1110 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms