RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	GUA1	P38625	525 aa	Known RBP	6.03	□□□□□ -1.44
VHR1	YIL056W	SLY41	P22215	453 aa		6.02	□□□□□ -1.45
VHR1	YIL056W	ISM1	P48526	1002 aa		6.02	□□□□□ -1.45
VHR1	YIL056W	YML082W	Q04533	649 aa	Known RBP	6.02	□□□□□ -1.45
VHR1	YIL056W	SCJ1	P25303	377 aa		6.01	□□□□□ -1.45
VHR1	YIL056W	YNL115C	P53925	644 aa		6.01	□□□□□ -1.45
VHR1	YIL056W	BRL1	P38770	471 aa		6	□□□□□ -1.45
VHR1	YIL056W	STR2	P47164	639 aa		6	□□□□□ -1.45
VHR1	YIL056W	PAT1	P25644	796 aa	Known RBP	5.99	□□□□□ -1.45
VHR1	YIL056W	BCK2	P33306	851 aa		5.99	□□□□□ -1.45
VHR1	YIL056W	HST2	P53686	357 aa		5.99	□□□□□ -1.45
VHR1	YIL056W	DMA2	P53924	522 aa		5.99	□□□□□ -1.45
VHR1	YIL056W	PKH3	Q03306	898 aa	Predicted RBP	5.99	□□□□□ -1.45
VHR1	YIL056W	PRT1	P06103	763 aa	Known RBP	5.99	□□□□□ -1.45
VHR1	YIL056W	ESS1	P22696	170 aa		5.99	□□□□□ -1.45
VHR1	YIL056W	RAM1	P22007	431 aa		5.98	□□□□□ -1.45
VHR1	YIL056W	RTF1	P53064	558 aa		5.98	□□□□□ -1.45
VHR1	YIL056W	TBF1	Q02457	562 aa		5.98	□□□□□ -1.45
VHR1	YIL056W	BUD20	Q08004	166 aa	Predicted RBP	5.98	□□□□□ -1.45
VHR1	YIL056W	SIT4	P20604	311 aa		5.97	□□□□□ -1.45
VHR1	YIL056W	SPT16	P32558	1035 aa	Known RBP	5.97	□□□□□ -1.45
VHR1	YIL056W	ERF2	Q06551	359 aa		5.97	□□□□□ -1.45
VHR1	YIL056W	YPR015C	Q12531	247 aa		5.97	□□□□□ -1.45
VHR1	YIL056W	ARG8	P18544	423 aa		5.97	□□□□□ -1.45
VHR1	YIL056W	HPC2	Q01448	625 aa		5.95	□□□□□ -1.46
VHR1	YIL056W	TFB3	Q03290	321 aa		5.95	□□□□□ -1.46
VHR1	YIL056W	RRN7	P40992	514 aa		5.94	□□□□□ -1.46
VHR1	YIL056W	KTR1	P27810	393 aa	Known RBP	5.93	□□□□□ -1.46
VHR1	YIL056W	YJU3	P28321	313 aa		5.93	□□□□□ -1.46
VHR1	YIL056W	SAS4	Q04003	481 aa		5.93	□□□□□ -1.46
VHR1	YIL056W	PUS6	P53294	404 aa		5.93	□□□□□ -1.46
VHR1	YIL056W	MRF1	P30775	413 aa	Predicted RBP	5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-DR4	O74302	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-H	P0C2I4	478 aa	Known RBP	5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-A	P0CX57	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-PR1	P0CX58	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-OR	P0CX59	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-PR2	P0CX60	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-DR5	P0CX65	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-ER2	P0CX66	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-GR3	P0CX67	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-LR1	P0CX68	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-MR2	P0CX69	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-JR2	P47099	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-DR1	Q03856	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-ML1	Q04706	440 aa	Known RBP	5.91	□□□□□ -1.46
VHR1	YIL056W	LAM6	Q08001	693 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-BR	Q12217	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	RAD59	Q12223	238 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-NL2	Q12470	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	TY1A-GR2	Q12485	440 aa		5.91	□□□□□ -1.46
VHR1	YIL056W	ERG12	P07277	443 aa		5.9	□□□□□ -1.46
VHR1	YIL056W	TRM1	P15565	570 aa	Known RBP	5.9	□□□□□ -1.46
VHR1	YIL056W	SEC2	P17065	759 aa		5.9	□□□□□ -1.46
VHR1	YIL056W	YBL036C	P38197	257 aa		5.9	□□□□□ -1.46
VHR1	YIL056W	TUB4	P53378	473 aa		5.9	□□□□□ -1.46
VHR1	YIL056W	KXD1	P53158	218 aa		5.89	□□□□□ -1.47
VHR1	YIL056W	XDJ1	P39102	459 aa		5.88	□□□□□ -1.47
VHR1	YIL056W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
VHR1	YIL056W	PKC1	P24583	1151 aa		5.87	□□□□□ -1.47
VHR1	YIL056W	YDL206W	Q12424	762 aa		5.87	□□□□□ -1.47
VHR1	YIL056W	YJL007C	P47080	104 aa		5.86	□□□□□ -1.47
VHR1	YIL056W	YEL077C	Q3E7X8	1277 aa		5.86	□□□□□ -1.47
VHR1	YIL056W	PAC1	P39946	494 aa	Known RBP	5.86	□□□□□ -1.47
VHR1	YIL056W	ALR1	Q08269	859 aa		5.86	□□□□□ -1.47
VHR1	YIL056W	RPL34B	P40525	121 aa	Known RBP	5.85	□□□□□ -1.47
VHR1	YIL056W	AGE1	Q04412	482 aa		5.83	□□□□□ -1.48
VHR1	YIL056W	RPA14	P50106	137 aa		5.82	□□□□□ -1.48
VHR1	YIL056W	FRK1	Q03002	865 aa	Predicted RBP	5.82	□□□□□ -1.48
VHR1	YIL056W	CSE4	P36012	229 aa		5.82	□□□□□ -1.48
VHR1	YIL056W	RSC30	P38781	883 aa		5.8	□□□□□ -1.48
VHR1	YIL056W	TAF7	Q05021	590 aa		5.8	□□□□□ -1.48
VHR1	YIL056W	PDC1	P06169	563 aa	Known RBP	5.79	□□□□□ -1.48
VHR1	YIL056W	YPR097W	Q06839	1073 aa		5.79	□□□□□ -1.48
VHR1	YIL056W	BIM1	P40013	344 aa		5.78	□□□□□ -1.48
VHR1	YIL056W	HXT10	P43581	546 aa		5.78	□□□□□ -1.48
VHR1	YIL056W	MAK16	P10962	306 aa	Predicted RBP	5.78	□□□□□ -1.48
VHR1	YIL056W	KIP2	P28743	706 aa		5.78	□□□□□ -1.48
VHR1	YIL056W	DPS1	P04802	557 aa	Known RBP	5.77	□□□□□ -1.49
VHR1	YIL056W	YNL108C	P53929	270 aa		5.77	□□□□□ -1.49
VHR1	YIL056W	AMS1	P22855	1083 aa		5.76	□□□□□ -1.49
VHR1	YIL056W	BDP1	P46678	594 aa		5.76	□□□□□ -1.49
VHR1	YIL056W	SPT5	P27692	1063 aa	Known RBP	5.76	□□□□□ -1.49
VHR1	YIL056W	PUS5	Q06244	254 aa		5.76	□□□□□ -1.49
VHR1	YIL056W	RRD1	P40454	393 aa	Known RBP	5.74	□□□□□ -1.49
VHR1	YIL056W	ATG32	P40458	529 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	TEC1	P18412	486 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	SDH2	P21801	266 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	BIO2	P32451	375 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	IXR1	P33417	597 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	CST6	P40535	587 aa		5.74	□□□□□ -1.49
VHR1	YIL056W	RLF2	Q12495	606 aa		5.73	□□□□□ -1.49
VHR1	YIL056W	YDJ1	P25491	409 aa	Known RBP	5.72	□□□□□ -1.49
VHR1	YIL056W	RTG2	P32608	588 aa	Known RBP	5.72	□□□□□ -1.49
VHR1	YIL056W	SYH1	Q02875	849 aa	Known RBP	5.72	□□□□□ -1.49
VHR1	YIL056W	RAS1	P01119	309 aa		5.72	□□□□□ -1.49
VHR1	YIL056W	TIF1	P10081	395 aa	Known RBP	5.72	□□□□□ -1.49
VHR1	YIL056W	NAF1	P53919	492 aa	Known RBP	5.72	□□□□□ -1.49
VHR1	YIL056W	YPR204W	Q08995	1032 aa		5.72	□□□□□ -1.49
VHR1	YIL056W	MOD5	P07884	428 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms