RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA2	YHR108W	ABP1	P15891	592 aa	Known RBP	10.63	□□□□□ -0.71
GGA2	YHR108W	PSK1	P31374	1356 aa		10.61	□□□□□ -0.71
GGA2	YHR108W	RPP0	P05317	312 aa	Known RBP	10.6	□□□□□ -0.71
GGA2	YHR108W	RCM1	P53972	490 aa		10.6	□□□□□ -0.71
GGA2	YHR108W	IOC4	Q04213	475 aa		10.6	□□□□□ -0.71
GGA2	YHR108W	YML133C	Q03099	1374 aa		10.59	□□□□□ -0.71
GGA2	YHR108W	YLL067C	Q07888	1374 aa		10.59	□□□□□ -0.71
GGA2	YHR108W	YLL066C	Q99208	1374 aa		10.59	□□□□□ -0.71
GGA2	YHR108W	CDC45	Q08032	650 aa		10.57	□□□□□ -0.72
GGA2	YHR108W	TRK1	P12685	1235 aa		10.57	□□□□□ -0.72
GGA2	YHR108W	YEF3	P16521	1044 aa	Known RBP	10.57	□□□□□ -0.72
GGA2	YHR108W	VPS27	P40343	622 aa	Known RBP	10.57	□□□□□ -0.72
GGA2	YHR108W	PPH3	P32345	308 aa		10.56	□□□□□ -0.72
GGA2	YHR108W	YNR029C	P53729	429 aa	Known RBP	10.55	□□□□□ -0.72
GGA2	YHR108W	TY1B-NL2	Q99337	1749 aa	Known RBP	10.54	□□□□□ -0.72
GGA2	YHR108W	YDL144C	Q07589	356 aa		10.54	□□□□□ -0.72
GGA2	YHR108W	LEU2	P04173	364 aa	Predicted RBP	10.52	□□□□□ -0.72
GGA2	YHR108W	CPS1	P27614	576 aa		10.52	□□□□□ -0.72
GGA2	YHR108W	KAR2	P16474	682 aa	Known RBP	10.52	□□□□□ -0.73
GGA2	YHR108W	PDI1	P17967	522 aa	Known RBP	10.52	□□□□□ -0.73
GGA2	YHR108W	SNF2	P22082	1703 aa		10.51	□□□□□ -0.73
GGA2	YHR108W	TAP42	Q04372	366 aa		10.51	□□□□□ -0.73
GGA2	YHR108W	MTR4	P47047	1073 aa	Known RBP	10.5	□□□□□ -0.73
GGA2	YHR108W	RTF1	P53064	558 aa		10.49	□□□□□ -0.73
GGA2	YHR108W	YRB30	P53107	440 aa	Predicted RBP	10.48	□□□□□ -0.73
GGA2	YHR108W	RVB2	Q12464	471 aa	Known RBP	10.48	□□□□□ -0.73
GGA2	YHR108W	USO1	P25386	1790 aa		10.47	□□□□□ -0.73
GGA2	YHR108W	GRX4	P32642	244 aa		10.47	□□□□□ -0.73
GGA2	YHR108W	RTR1	P40084	226 aa	Predicted RBP	10.47	□□□□□ -0.73
GGA2	YHR108W	MPP10	P47083	593 aa	Known RBP	10.47	□□□□□ -0.73
GGA2	YHR108W	PAP2	P53632	584 aa	Known RBP	10.45	□□□□□ -0.74
GGA2	YHR108W	YMR196W	Q04336	1088 aa		10.44	□□□□□ -0.74
GGA2	YHR108W	SUI2	P20459	304 aa	Known RBP	10.43	□□□□□ -0.74
GGA2	YHR108W	TFA1	P36100	482 aa		10.43	□□□□□ -0.74
GGA2	YHR108W	FUN12	P39730	1002 aa	Known RBP	10.43	□□□□□ -0.74
GGA2	YHR108W	RRP46	P53256	223 aa	Predicted RBP	10.43	□□□□□ -0.74
GGA2	YHR108W	HIM1	Q06674	414 aa		10.43	□□□□□ -0.74
GGA2	YHR108W	AUS1	Q08409	1394 aa		10.42	□□□□□ -0.74
GGA2	YHR108W	CSE4	P36012	229 aa		10.42	□□□□□ -0.74
GGA2	YHR108W	ADE6	P38972	1358 aa	Known RBP	10.4	□□□□□ -0.74
GGA2	YHR108W	FPR3	P38911	411 aa	Known RBP	10.4	□□□□□ -0.74
GGA2	YHR108W	PRP43	P53131	767 aa	Known RBP	10.4	□□□□□ -0.74
GGA2	YHR108W	RPS24A	P0CX31	135 aa	Known RBP	10.39	□□□□□ -0.75
GGA2	YHR108W	RPS24B	P0CX32	135 aa	Known RBP	10.39	□□□□□ -0.75
GGA2	YHR108W	PRD1	P25375	712 aa		10.38	□□□□□ -0.75
GGA2	YHR108W	SAP155	P43612	1002 aa		10.38	□□□□□ -0.75
GGA2	YHR108W	GAS4	Q08271	471 aa		10.37	□□□□□ -0.75
GGA2	YHR108W	RPO41	P13433	1351 aa	Known RBP	10.37	□□□□□ -0.75
GGA2	YHR108W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	10.36	□□□□□ -0.75	not detected
GGA2	YHR108W	DPS1	P04802	557 aa	Known RBP	10.35	□□□□□ -0.75
GGA2	YHR108W	TPD3	P31383	635 aa		10.35	□□□□□ -0.75
GGA2	YHR108W	THI12	P42883	340 aa		10.34	□□□□□ -0.75
GGA2	YHR108W	THI5	P43534	340 aa		10.34	□□□□□ -0.75
GGA2	YHR108W	THI11	P47183	340 aa		10.34	□□□□□ -0.75
GGA2	YHR108W	THI22	Q06490	572 aa		10.34	□□□□□ -0.75
GGA2	YHR108W	THI13	Q07748	340 aa		10.34	□□□□□ -0.75
GGA2	YHR108W	RAD2	P07276	1031 aa		10.32	□□□□□ -0.76
GGA2	YHR108W	TY4B-H	P0C2J7	1802 aa		10.3	□□□□□ -0.76
GGA2	YHR108W	TY4B-J	P47024	1803 aa		10.3	□□□□□ -0.76
GGA2	YHR108W	HEF3	P53978	1044 aa	Known RBP	10.3	□□□□□ -0.76
GGA2	YHR108W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	10.29	□□□□□ -0.76	not detected
GGA2	YHR108W	SIR4	P11978	1358 aa		10.29	□□□□□ -0.76
GGA2	YHR108W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.29	□□□□□ -0.76	not detected
GGA2	YHR108W	AKL1	P38080	1108 aa	Known RBP	10.28	□□□□□ -0.76
GGA2	YHR108W	RTT109	Q07794	436 aa		10.28	□□□□□ -0.76
GGA2	YHR108W	MAK21	Q12176	1025 aa	Known RBP	10.27	□□□□□ -0.77
GGA2	YHR108W	APC1	P53886	1748 aa		10.27	□□□□□ -0.77
GGA2	YHR108W	YRF1-2	P40105	1681 aa		10.26	□□□□□ -0.77
GGA2	YHR108W	RPC31	P17890	251 aa		10.26	□□□□□ -0.77
GGA2	YHR108W	YIL092W	P40497	633 aa		10.26	□□□□□ -0.77
GGA2	YHR108W	DAL5	P15365	543 aa		10.25	□□□□□ -0.77
GGA2	YHR108W	DSD1	P53095	428 aa		10.24	□□□□□ -0.77
GGA2	YHR108W	YRF1-4	O13559	1382 aa		10.23	□□□□□ -0.77
GGA2	YHR108W	YNL050C	P53952	270 aa		10.23	□□□□□ -0.77
GGA2	YHR108W	RRP5	Q05022	1729 aa	Known RBP	10.22	□□□□□ -0.77
GGA2	YHR108W	PRP5	P21372	849 aa	Predicted RBP	10.21	□□□□□ -0.77
GGA2	YHR108W	GYP7	P48365	746 aa		10.21	□□□□□ -0.78
GGA2	YHR108W	PRP45	P28004	379 aa	Predicted RBP	10.2	□□□□□ -0.78
GGA2	YHR108W	YIL177C	P40434	1758 aa		10.2	□□□□□ -0.78
GGA2	YHR108W	YJL225C	P40889	1758 aa		10.2	□□□□□ -0.78
GGA2	YHR108W	NTH2	P35172	780 aa		10.19	□□□□□ -0.78
GGA2	YHR108W	MAM1	P40065	302 aa		10.19	□□□□□ -0.78
GGA2	YHR108W	ZDS1	P50111	915 aa	Known RBP	10.19	□□□□□ -0.78
GGA2	YHR108W	POL32	P47110	350 aa		10.19	□□□□□ -0.78
GGA2	YHR108W	FKS3	Q04952	1785 aa		10.18	□□□□□ -0.78
GGA2	YHR108W	HSP104	P31539	908 aa	Known RBP	10.18	□□□□□ -0.78
GGA2	YHR108W	RRT14	P40470	206 aa		10.18	□□□□□ -0.78
GGA2	YHR108W	SLM3	Q12093	417 aa		10.18	□□□□□ -0.78
GGA2	YHR108W	MIF2	P35201	549 aa		10.17	□□□□□ -0.78
GGA2	YHR108W	CTF4	Q01454	927 aa		10.17	□□□□□ -0.78
GGA2	YHR108W	AOS1	Q06624	347 aa		10.16	□□□□□ -0.78
GGA2	YHR108W	URB1	P34241	1764 aa	Known RBP	10.16	□□□□□ -0.78
GGA2	YHR108W	YFR016C	P43597	1233 aa	Known RBP	10.16	□□□□□ -0.78
GGA2	YHR108W	PTP3	P40048	928 aa		10.15	□□□□□ -0.78
GGA2	YHR108W	MSB3	P48566	633 aa	Predicted RBP	10.15	□□□□□ -0.78
GGA2	YHR108W	EDE1	P34216	1381 aa		10.14	□□□□□ -0.79
GGA2	YHR108W	PUF6	Q04373	656 aa	Known RBP	10.14	□□□□□ -0.79
GGA2	YHR108W	TCB1	Q12466	1186 aa		10.14	□□□□□ -0.79
GGA2	YHR108W	SRT1	Q03175	343 aa		10.13	□□□□□ -0.79
GGA2	YHR108W	YBR287W	P38355	427 aa		10.11	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms