RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C RTF1P53064 558 aa5.56□□□□□ -1.52
TCD1YHR003C NIS1P53939 407 aa5.56□□□□□ -1.52
TCD1YHR003C TY1A-DR4O74302 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-HP0C2I4 478 aaKnown RBP5.55□□□□□ -1.52
TCD1YHR003C TY1A-AP0CX57 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-PR1P0CX58 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-ORP0CX59 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-PR2P0CX60 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-DR5P0CX65 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-ER2P0CX66 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-GR3P0CX67 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-LR1P0CX68 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-MR2P0CX69 440 aa5.55□□□□□ -1.52
TCD1YHR003C KEX2P13134 814 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-JR2P47099 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-DR1Q03856 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-ML1Q04706 440 aaKnown RBP5.55□□□□□ -1.52
TCD1YHR003C TY1A-BRQ12217 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-NL2Q12470 440 aa5.55□□□□□ -1.52
TCD1YHR003C TY1A-GR2Q12485 440 aa5.55□□□□□ -1.52
TCD1YHR003C SEC2P17065 759 aa5.54□□□□□ -1.52
TCD1YHR003C MRF1P30775 413 aaPredicted RBP5.54□□□□□ -1.52
TCD1YHR003C YNL115CP53925 644 aa5.54□□□□□ -1.52
TCD1YHR003C YMR196WQ04336 1088 aa5.54□□□□□ -1.52
TCD1YHR003C FPK1P53739 893 aa5.53□□□□□ -1.52
TCD1YHR003C ERF2Q06551 359 aa5.53□□□□□ -1.52
TCD1YHR003C PAT1P25644 796 aaKnown RBP5.52□□□□□ -1.53
TCD1YHR003C SPT16P32558 1035 aaKnown RBP5.52□□□□□ -1.53
TCD1YHR003C DPS1P04802 557 aaKnown RBP5.51□□□□□ -1.53
TCD1YHR003C HST2P53686 357 aa5.51□□□□□ -1.53
TCD1YHR003C KIN1P13185 1064 aa5.5□□□□□ -1.53
TCD1YHR003C RRN7P40992 514 aa5.5□□□□□ -1.53
TCD1YHR003C ERG12P07277 443 aa5.49□□□□□ -1.53
TCD1YHR003C SDH2P21801 266 aa5.49□□□□□ -1.53
TCD1YHR003C YEL077CQ3E7X8 1277 aa5.49□□□□□ -1.53
TCD1YHR003C AMS1P22855 1083 aa5.48□□□□□ -1.53
TCD1YHR003C GLN1P32288 370 aaKnown RBP5.48□□□□□ -1.53
TCD1YHR003C SLY41P22215 453 aa5.47□□□□□ -1.53
TCD1YHR003C TUB4P53378 473 aa5.47□□□□□ -1.53
TCD1YHR003C MMP1Q12372 583 aa5.47□□□□□ -1.53
TCD1YHR003C SCJ1P25303 377 aa5.46□□□□□ -1.54
TCD1YHR003C AGE1Q04412 482 aa5.46□□□□□ -1.54
TCD1YHR003C RAS1P01119 309 aa5.45□□□□□ -1.54
TCD1YHR003C CSN12P47130 423 aa5.45□□□□□ -1.54
TCD1YHR003C PAC1P39946 494 aaKnown RBP5.44□□□□□ -1.54
TCD1YHR003C PUS6P53294 404 aa5.44□□□□□ -1.54
TCD1YHR003C LEO1P38439 464 aa5.43□□□□□ -1.54
TCD1YHR003C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
TCD1YHR003C TYW1Q08960 810 aaKnown RBP5.43□□□□□ -1.54
TCD1YHR003C SSA2P10592 639 aaKnown RBP5.42□□□□□ -1.54
TCD1YHR003C ESS1P22696 170 aa5.42□□□□□ -1.54
TCD1YHR003C KTR1P27810 393 aaKnown RBP5.42□□□□□ -1.54
TCD1YHR003C KXD1P53158 218 aa5.41□□□□□ -1.54
TCD1YHR003C TBF1Q02457 562 aa5.41□□□□□ -1.54
TCD1YHR003C MOD5P07884 428 aa5.4□□□□□ -1.54
TCD1YHR003C TRM1P15565 570 aaKnown RBP5.4□□□□□ -1.54
TCD1YHR003C CST6P40535 587 aa5.4□□□□□ -1.54
TCD1YHR003C LAM6Q08001 693 aa5.4□□□□□ -1.54
TCD1YHR003C YJU3P28321 313 aa5.39□□□□□ -1.55
TCD1YHR003C GUA1P38625 525 aaKnown RBP5.39□□□□□ -1.55
TCD1YHR003C RGA1P39083 1007 aa5.39□□□□□ -1.55
TCD1YHR003C BDP1P46678 594 aa5.39□□□□□ -1.55
TCD1YHR003C RPA14P50106 137 aa5.39□□□□□ -1.55
TCD1YHR003C PKH3Q03306 898 aaPredicted RBP5.39□□□□□ -1.55
TCD1YHR003C TPD3P31383 635 aa5.38□□□□□ -1.55
TCD1YHR003C FRK1Q03002 865 aaPredicted RBP5.38□□□□□ -1.55
TCD1YHR003C ALR1Q08269 859 aa5.38□□□□□ -1.55
TCD1YHR003C YDL206WQ12424 762 aa5.38□□□□□ -1.55
TCD1YHR003C PDC1P06169 563 aaKnown RBP5.37□□□□□ -1.55
TCD1YHR003C RSC30P38781 883 aa5.37□□□□□ -1.55
TCD1YHR003C HXT10P43581 546 aa5.37□□□□□ -1.55
TCD1YHR003C YPR097WQ06839 1073 aa5.37□□□□□ -1.55
TCD1YHR003C ARG8P18544 423 aa5.36□□□□□ -1.55
TCD1YHR003C HPC2Q01448 625 aa5.36□□□□□ -1.55
TCD1YHR003C RAD59Q12223 238 aa5.35□□□□□ -1.55
TCD1YHR003C RRD1P40454 393 aaKnown RBP5.34□□□□□ -1.55
TCD1YHR003C SRC1Q03707 834 aa5.34□□□□□ -1.55
TCD1YHR003C HED1Q03937 162 aa5.34□□□□□ -1.55
TCD1YHR003C TRK1P12685 1235 aa5.32□□□□□ -1.56
TCD1YHR003C BRL1P38770 471 aa5.31□□□□□ -1.56
TCD1YHR003C PUS5Q06244 254 aa5.31□□□□□ -1.56
TCD1YHR003C CDC4P07834 779 aa5.3□□□□□ -1.56
TCD1YHR003C CLA4P48562 842 aa5.3□□□□□ -1.56
TCD1YHR003C SYH1Q02875 849 aaKnown RBP5.3□□□□□ -1.56
TCD1YHR003C AIR1P40507 360 aaKnown RBP5.29□□□□□ -1.56
TCD1YHR003C HGH1P48362 394 aaKnown RBP5.29□□□□□ -1.56
TCD1YHR003C TFB3Q03290 321 aa5.29□□□□□ -1.56
TCD1YHR003C KIP2P28743 706 aa5.28□□□□□ -1.56
TCD1YHR003C CSE4P36012 229 aa5.28□□□□□ -1.56
TCD1YHR003C MAK16P10962 306 aaPredicted RBP5.27□□□□□ -1.57
TCD1YHR003C VAC17P25591 423 aa5.26□□□□□ -1.57
TCD1YHR003C IXR1P33417 597 aa5.26□□□□□ -1.57
TCD1YHR003C YBL036CP38197 257 aa5.25□□□□□ -1.57
TCD1YHR003C PKC1P24583 1151 aa5.24□□□□□ -1.57
TCD1YHR003C NAF1P53919 492 aaKnown RBP5.24□□□□□ -1.57
TCD1YHR003C MET32Q12041 191 aa5.24□□□□□ -1.57
TCD1YHR003C FIG4P42837 879 aa5.23□□□□□ -1.57
TCD1YHR003C HST3P53687 447 aa5.23□□□□□ -1.57
TCD1YHR003C GCR2Q01722 534 aa5.23□□□□□ -1.57
TCD1YHR003C TEC1P18412 486 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms