RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W TYS1P36421 394 aaKnown RBP9.37□□□□□ -0.91
YRF1-3YGR296W ITC1P53125 1264 aa9.37□□□□□ -0.91
YRF1-3YGR296W ATG2P53855 1592 aa9.37□□□□□ -0.91
YRF1-3YGR296W UBP1P25037 809 aa9.37□□□□□ -0.91
YRF1-3YGR296W ETT1Q08421 412 aaKnown RBP9.37□□□□□ -0.91
YRF1-3YGR296W MIC60P36112 540 aa9.36□□□□□ -0.91
YRF1-3YGR296W RIX1P38883 763 aaPredicted RBP9.36□□□□□ -0.91
YRF1-3YGR296W MAM1P40065 302 aa9.35□□□□□ -0.91
YRF1-3YGR296W ISW2Q08773 1120 aa9.35□□□□□ -0.91
YRF1-3YGR296W NBL1Q3E7Y6 73 aa9.35□□□□□ -0.91
YRF1-3YGR296W NAB3P38996 802 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
YRF1-3YGR296W LTE1P07866 1435 aa9.35□□□□□ -0.91
YRF1-3YGR296W YBP2P53169 641 aa9.35□□□□□ -0.91
YRF1-3YGR296W MIF2P35201 549 aa9.34□□□□□ -0.91
YRF1-3YGR296W TCB1Q12466 1186 aa9.34□□□□□ -0.91
YRF1-3YGR296W STM1P39015 273 aaKnown RBP9.34□□□□□ -0.91
YRF1-3YGR296W TOP1P04786 769 aa9.33□□□□□ -0.92
YRF1-3YGR296W SAP155P43612 1002 aa9.33□□□□□ -0.92
YRF1-3YGR296W MFT1P33441 392 aaKnown RBP9.33□□□□□ -0.92
YRF1-3YGR296W RLF2Q12495 606 aa9.33□□□□□ -0.92
YRF1-3YGR296W RMD1Q03441 430 aa9.32□□□□□ -0.92
YRF1-3YGR296W KRE5P22023 1365 aa9.32□□□□□ -0.92
YRF1-3YGR296W HPC2Q01448 625 aa9.32□□□□□ -0.92
YRF1-3YGR296W PRS1P32895 427 aaKnown RBP9.31□□□□□ -0.92
YRF1-3YGR296W PBY1P38254 753 aa9.31□□□□□ -0.92
YRF1-3YGR296W PDR18P53756 1333 aa9.31□□□□□ -0.92
YRF1-3YGR296W CDC25P04821 1589 aa9.3□□□□□ -0.92
YRF1-3YGR296W RAD9P14737 1309 aa9.3□□□□□ -0.92
YRF1-3YGR296W RAD50P12753 1312 aa9.3□□□□□ -0.92
YRF1-3YGR296W RAV1P47104 1357 aa9.3□□□□□ -0.92
YRF1-3YGR296W BUD3P25558 1636 aa9.3□□□□□ -0.92
YRF1-3YGR296W BIK1P11709 440 aa9.3□□□□□ -0.92
YRF1-3YGR296W KCC4P25389 1037 aa9.29□□□□□ -0.92
YRF1-3YGR296W AKL1P38080 1108 aaKnown RBP9.29□□□□□ -0.92
YRF1-3YGR296W YNR029CP53729 429 aaKnown RBP9.29□□□□□ -0.92
YRF1-3YGR296W MET5P47169 1442 aa9.29□□□□□ -0.92
YRF1-3YGR296W NOP53Q12080 455 aaKnown RBP9.28□□□□□ -0.92
YRF1-3YGR296W HSP82P02829 709 aaKnown RBP9.28□□□□□ -0.92
YRF1-3YGR296W NUP133P36161 1157 aa9.28□□□□□ -0.92
YRF1-3YGR296W PRP5P21372 849 aaPredicted RBP9.28□□□□□ -0.92
YRF1-3YGR296W RNR2P09938 399 aaKnown RBP9.28□□□□□ -0.92
YRF1-3YGR296W NUP170P38181 1502 aa9.27□□□□□ -0.93
YRF1-3YGR296W SLN1P39928 1220 aaPredicted RBP9.27□□□□□ -0.93
YRF1-3YGR296W RSM25P40496 264 aa9.27□□□□□ -0.93
YRF1-3YGR296W HUL5P53119 910 aa9.26□□□□□ -0.93
YRF1-3YGR296W DNF1P32660 1571 aa9.26□□□□□ -0.93
YRF1-3YGR296W BMS1Q08965 1183 aaKnown RBP9.26□□□□□ -0.93
YRF1-3YGR296W TIF4632P39936 914 aaKnown RBP9.26□□□□□ -0.93
YRF1-3YGR296W SPO1P53541 631 aa9.26□□□□□ -0.93
YRF1-3YGR296W MDG1P53885 366 aa9.26□□□□□ -0.93
YRF1-3YGR296W MLP2P40457 1679 aa9.26□□□□□ -0.93
YRF1-3YGR296W DJP1P40564 432 aa9.26□□□□□ -0.93
YRF1-3YGR296W RMT2Q03305 412 aa9.26□□□□□ -0.93
YRF1-3YGR296W TRM3Q07527 1436 aa9.26□□□□□ -0.93
YRF1-3YGR296W UGA3P26370 528 aa9.25□□□□□ -0.93
YRF1-3YGR296W SER1P33330 395 aaKnown RBP9.25□□□□□ -0.93
YRF1-3YGR296W FKH1P40466 484 aa9.25□□□□□ -0.93
YRF1-3YGR296W IRC3Q06683 689 aa9.24□□□□□ -0.93
YRF1-3YGR296W MRD1Q06106 887 aaKnown RBP9.24□□□□□ -0.93
YRF1-3YGR296W SUI2P20459 304 aaKnown RBP9.24□□□□□ -0.93
YRF1-3YGR296W SAC6P32599 642 aaKnown RBP9.24□□□□□ -0.93
YRF1-3YGR296W XKS1P42826 600 aa9.24□□□□□ -0.93
YRF1-3YGR296W ENT3P47160 408 aa9.23□□□□□ -0.93
YRF1-3YGR296W MRP7P12687 371 aa9.23□□□□□ -0.93
YRF1-3YGR296W ARL1P38116 183 aaKnown RBP9.23□□□□□ -0.93
YRF1-3YGR296W BUD6P41697 788 aa9.23□□□□□ -0.93
YRF1-3YGR296W TRP5P00931 707 aaKnown RBP9.22□□□□□ -0.93
YRF1-3YGR296W MGA2P40578 1113 aa9.22□□□□□ -0.93
YRF1-3YGR296W HIM1Q06674 414 aa9.22□□□□□ -0.93
YRF1-3YGR296W PRD1P25375 712 aa9.22□□□□□ -0.93
YRF1-3YGR296W CBF5P33322 483 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
YRF1-3YGR296W PSK1P31374 1356 aa9.21□□□□□ -0.93
YRF1-3YGR296W DEF1P35732 738 aaKnown RBP9.21□□□□□ -0.93
YRF1-3YGR296W TTI1P36097 1038 aa9.21□□□□□ -0.94
YRF1-3YGR296W SSF1P38789 453 aaPredicted RBP9.2□□□□□ -0.94
YRF1-3YGR296W PWP2P25635 923 aaKnown RBP9.2□□□□□ -0.94
YRF1-3YGR296W CTF4Q01454 927 aa9.2□□□□□ -0.94
YRF1-3YGR296W TAP42Q04372 366 aa9.2□□□□□ -0.94
YRF1-3YGR296W ULS1Q08562 1619 aa9.19□□□□□ -0.94
YRF1-3YGR296W YPP1P46951 817 aa9.19□□□□□ -0.94
YRF1-3YGR296W TRK1P12685 1235 aa9.19□□□□□ -0.94
YRF1-3YGR296W ESC1Q03661 1658 aaKnown RBP9.19□□□□□ -0.94
YRF1-3YGR296W HSC82P15108 705 aaKnown RBP9.18□□□□□ -0.94
YRF1-3YGR296W YKL133CP36066 463 aa9.18□□□□□ -0.94
YRF1-3YGR296W SMC3P47037 1230 aa9.18□□□□□ -0.94
YRF1-3YGR296W RAD4P14736 754 aa9.18□□□□□ -0.94
YRF1-3YGR296W TPM2P40414 161 aa9.18□□□□□ -0.94
YRF1-3YGR296W PIL1P53252 339 aaKnown RBP9.18□□□□□ -0.94
YRF1-3YGR296W DSD1P53095 428 aa9.17□□□□□ -0.94
YRF1-3YGR296W MLC1P53141 149 aa9.17□□□□□ -0.94
YRF1-3YGR296W SGD1Q06132 899 aa9.17□□□□□ -0.94
YRF1-3YGR296W SRC1Q03707 834 aa9.17□□□□□ -0.94
YRF1-3YGR296W SSP2Q08646 371 aa9.17□□□□□ -0.94
YRF1-3YGR296W OSW7P43611 510 aa9.16□□□□□ -0.94
YRF1-3YGR296W BRE1Q07457 700 aaKnown RBP9.16□□□□□ -0.94
YRF1-3YGR296W SNT2P53127 1403 aa9.16□□□□□ -0.94
YRF1-3YGR296W SRS2P12954 1174 aa9.16□□□□□ -0.94
YRF1-3YGR296W THI12P42883 340 aa9.16□□□□□ -0.94
YRF1-3YGR296W THI5P43534 340 aa9.16□□□□□ -0.94
YRF1-3YGR296W THI11P47183 340 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms