RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeastyeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EMP47YFL048C RTF1P53064 558 aa6.87□□□□□ -1.31
EMP47YFL048C TY1A-DR4O74302 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-HP0C2I4 478 aaKnown RBP6.86□□□□□ -1.31
EMP47YFL048C TY1A-AP0CX57 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-PR1P0CX58 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-ORP0CX59 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-PR2P0CX60 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-DR5P0CX65 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-ER2P0CX66 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-GR3P0CX67 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-LR1P0CX68 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-MR2P0CX69 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-JR2P47099 440 aa6.86□□□□□ -1.31
EMP47YFL048C NIS1P53939 407 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-DR1Q03856 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-ML1Q04706 440 aaKnown RBP6.86□□□□□ -1.31
EMP47YFL048C TY1A-BRQ12217 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-NL2Q12470 440 aa6.86□□□□□ -1.31
EMP47YFL048C TY1A-GR2Q12485 440 aa6.86□□□□□ -1.31
EMP47YFL048C KEX2P13134 814 aa6.85□□□□□ -1.31
EMP47YFL048C MRF1P30775 413 aaPredicted RBP6.85□□□□□ -1.31
EMP47YFL048C SEC2P17065 759 aa6.84□□□□□ -1.31
EMP47YFL048C SPA2P23201 1466 aaKnown RBP6.84□□□□□ -1.31
EMP47YFL048C YNL115CP53925 644 aa6.83□□□□□ -1.32
EMP47YFL048C YMR196WQ04336 1088 aa6.83□□□□□ -1.32
EMP47YFL048C DPS1P04802 557 aaKnown RBP6.82□□□□□ -1.32
EMP47YFL048C FPK1P53739 893 aa6.82□□□□□ -1.32
EMP47YFL048C PAT1P25644 796 aaKnown RBP6.81□□□□□ -1.32
EMP47YFL048C SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
EMP47YFL048C ERF2Q06551 359 aa6.81□□□□□ -1.32
EMP47YFL048C HST2P53686 357 aa6.8□□□□□ -1.32
EMP47YFL048C SDH2P21801 266 aa6.79□□□□□ -1.32
EMP47YFL048C YEL077CQ3E7X8 1277 aa6.79□□□□□ -1.32
EMP47YFL048C SSN2P38931 1420 aa6.78□□□□□ -1.32
EMP47YFL048C ERG12P07277 443 aa6.78□□□□□ -1.32
EMP47YFL048C AMS1P22855 1083 aa6.78□□□□□ -1.32
EMP47YFL048C RRN7P40992 514 aa6.78□□□□□ -1.32
EMP47YFL048C KIN1P13185 1064 aa6.77□□□□□ -1.32
EMP47YFL048C GLN1P32288 370 aaKnown RBP6.76□□□□□ -1.33
EMP47YFL048C SLY41P22215 453 aa6.76□□□□□ -1.33
EMP47YFL048C TUB4P53378 473 aa6.76□□□□□ -1.33
EMP47YFL048C AGE1Q04412 482 aa6.76□□□□□ -1.33
EMP47YFL048C MMP1Q12372 583 aa6.76□□□□□ -1.33
EMP47YFL048C INO80P53115 1489 aa6.74□□□□□ -1.33
EMP47YFL048C RAS1P01119 309 aa6.73□□□□□ -1.33
EMP47YFL048C PAC1P39946 494 aaKnown RBP6.73□□□□□ -1.33
EMP47YFL048C CSN12P47130 423 aa6.73□□□□□ -1.33
EMP47YFL048C SCJ1P25303 377 aa6.72□□□□□ -1.33
EMP47YFL048C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
EMP47YFL048C PUS6P53294 404 aa6.71□□□□□ -1.34
EMP47YFL048C SSA2P10592 639 aaKnown RBP6.7□□□□□ -1.34
EMP47YFL048C ESS1P22696 170 aa6.7□□□□□ -1.34
EMP47YFL048C TYW1Q08960 810 aaKnown RBP6.7□□□□□ -1.34
EMP47YFL048C KTR1P27810 393 aaKnown RBP6.69□□□□□ -1.34
EMP47YFL048C TBF1Q02457 562 aa6.69□□□□□ -1.34
EMP47YFL048C MOD5P07884 428 aa6.68□□□□□ -1.34
EMP47YFL048C LEO1P38439 464 aa6.68□□□□□ -1.34
EMP47YFL048C CST6P40535 587 aa6.68□□□□□ -1.34
EMP47YFL048C KXD1P53158 218 aa6.68□□□□□ -1.34
EMP47YFL048C LAM6Q08001 693 aa6.68□□□□□ -1.34
EMP47YFL048C TRM1P15565 570 aaKnown RBP6.67□□□□□ -1.34
EMP47YFL048C TPD3P31383 635 aa6.66□□□□□ -1.34
EMP47YFL048C BDP1P46678 594 aa6.66□□□□□ -1.34
EMP47YFL048C RPA14P50106 137 aa6.66□□□□□ -1.34
EMP47YFL048C PKH3Q03306 898 aaPredicted RBP6.66□□□□□ -1.34
EMP47YFL048C YJU3P28321 313 aa6.65□□□□□ -1.35
EMP47YFL048C FRK1Q03002 865 aaPredicted RBP6.65□□□□□ -1.35
EMP47YFL048C ALR1Q08269 859 aa6.65□□□□□ -1.35
EMP47YFL048C YDL206WQ12424 762 aa6.65□□□□□ -1.35
EMP47YFL048C YPR097WQ06839 1073 aa6.64□□□□□ -1.35
EMP47YFL048C PDC1P06169 563 aaKnown RBP6.63□□□□□ -1.35
EMP47YFL048C GUA1P38625 525 aaKnown RBP6.63□□□□□ -1.35
EMP47YFL048C RSC30P38781 883 aa6.63□□□□□ -1.35
EMP47YFL048C HXT10P43581 546 aa6.63□□□□□ -1.35
EMP47YFL048C SRC1Q03707 834 aa6.62□□□□□ -1.35
EMP47YFL048C ARG8P18544 423 aa6.61□□□□□ -1.35
EMP47YFL048C RRD1P40454 393 aaKnown RBP6.61□□□□□ -1.35
EMP47YFL048C HPC2Q01448 625 aa6.61□□□□□ -1.35
EMP47YFL048C HED1Q03937 162 aa6.6□□□□□ -1.35
EMP47YFL048C RAD59Q12223 238 aa6.6□□□□□ -1.35
EMP47YFL048C TRK1P12685 1235 aa6.59□□□□□ -1.35
EMP47YFL048C TCB3Q03640 1545 aaKnown RBP6.58□□□□□ -1.36
EMP47YFL048C PUS5Q06244 254 aa6.56□□□□□ -1.36
EMP47YFL048C CDC4P07834 779 aa6.55□□□□□ -1.36
EMP47YFL048C BRL1P38770 471 aa6.55□□□□□ -1.36
EMP47YFL048C CLA4P48562 842 aa6.55□□□□□ -1.36
EMP47YFL048C AIR1P40507 360 aaKnown RBP6.54□□□□□ -1.36
EMP47YFL048C SYH1Q02875 849 aaKnown RBP6.54□□□□□ -1.36
EMP47YFL048C CSE4P36012 229 aa6.52□□□□□ -1.37
EMP47YFL048C TFB3Q03290 321 aa6.52□□□□□ -1.37
EMP47YFL048C TY1B-DR4Q07793 1604 aa6.52□□□□□ -1.37
EMP47YFL048C KIP2P28743 706 aa6.51□□□□□ -1.37
EMP47YFL048C HGH1P48362 394 aaKnown RBP6.51□□□□□ -1.37
EMP47YFL048C MAK16P10962 306 aaPredicted RBP6.5□□□□□ -1.37
EMP47YFL048C VAC17P25591 423 aa6.5□□□□□ -1.37
EMP47YFL048C IXR1P33417 597 aa6.5□□□□□ -1.37
EMP47YFL048C MET32Q12041 191 aa6.49□□□□□ -1.37
EMP47YFL048C YBL036CP38197 257 aa6.48□□□□□ -1.37
EMP47YFL048C NAF1P53919 492 aaKnown RBP6.48□□□□□ -1.37
EMP47YFL048C AFT1P22149 690 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms