RNA–Protein interactions for RNA: YER089C

PTC2, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC2, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC2YER089C YNR029CP53729 429 aaKnown RBP17.48■□□□□ 0.39
PTC2YER089C MLP1Q02455 1875 aaKnown RBP17.47■□□□□ 0.39
PTC2YER089C PSK1P31374 1356 aa17.47■□□□□ 0.39
PTC2YER089C YML133CQ03099 1374 aa17.47■□□□□ 0.39
PTC2YER089C YLL067CQ07888 1374 aa17.47■□□□□ 0.39
PTC2YER089C YLL066CQ99208 1374 aa17.47■□□□□ 0.39
PTC2YER089C TY1B-NL2Q99337 1749 aaKnown RBP17.44■□□□□ 0.38
PTC2YER089C PPH3P32345 308 aa17.44■□□□□ 0.38
PTC2YER089C CPS1P27614 576 aa17.4■□□□□ 0.38
PTC2YER089C YEF3P16521 1044 aaKnown RBP17.36■□□□□ 0.37
PTC2YER089C IOC4Q04213 475 aa17.36■□□□□ 0.37
PTC2YER089C YMR196WQ04336 1088 aa17.36■□□□□ 0.37
PTC2YER089C LEU2P04173 364 aaPredicted RBP17.33■□□□□ 0.36
PTC2YER089C USO1P25386 1790 aa17.32■□□□□ 0.36
PTC2YER089C TRK1P12685 1235 aa17.31■□□□□ 0.36
PTC2YER089C NOP2P40991 618 aaKnown RBP17.28■□□□□ 0.36
PTC2YER089C MTR4P47047 1073 aaKnown RBP17.28■□□□□ 0.36
PTC2YER089C TAP42Q04372 366 aa17.27■□□□□ 0.35
PTC2YER089C RPP0P05317 312 aaKnown RBP17.26■□□□□ 0.35
PTC2YER089C PDI1P17967 522 aaKnown RBP17.24■□□□□ 0.35
PTC2YER089C THI12P42883 340 aa17.21■□□□□ 0.35
PTC2YER089C THI5P43534 340 aa17.21■□□□□ 0.35
PTC2YER089C THI11P47183 340 aa17.21■□□□□ 0.35
PTC2YER089C THI13Q07748 340 aa17.21■□□□□ 0.35
PTC2YER089C ADE6P38972 1358 aaKnown RBP17.21■□□□□ 0.34
PTC2YER089C PRP43P53131 767 aaKnown RBP17.2■□□□□ 0.34
PTC2YER089C KAR2P16474 682 aaKnown RBP17.19■□□□□ 0.34
PTC2YER089C VPS27P40343 622 aaKnown RBP17.19■□□□□ 0.34
PTC2YER089C RTF1P53064 558 aa17.18■□□□□ 0.34
PTC2YER089C GRX4P32642 244 aa17.17■□□□□ 0.34
PTC2YER089C YDL144CQ07589 356 aa17.17■□□□□ 0.34
PTC2YER089C CDC45Q08032 650 aa17.17■□□□□ 0.34
PTC2YER089C MIF2P35201 549 aa17.15■□□□□ 0.34
PTC2YER089C HIM1Q06674 414 aa17.15■□□□□ 0.34
PTC2YER089C AUS1Q08409 1394 aa17.15■□□□□ 0.34
PTC2YER089C CSE4P36012 229 aa17.13■□□□□ 0.33
PTC2YER089C RRP46P53256 223 aaPredicted RBP17.13■□□□□ 0.33
PTC2YER089C RPS24AP0CX31 135 aaKnown RBP17.12■□□□□ 0.33
PTC2YER089C RPS24BP0CX32 135 aaKnown RBP17.12■□□□□ 0.33
PTC2YER089C RTR1P40084 226 aaPredicted RBP17.09■□□□□ 0.33
PTC2YER089C SNF2P22082 1703 aa17.07■□□□□ 0.32
PTC2YER089C MPP10P47083 593 aaKnown RBP17.07■□□□□ 0.32
PTC2YER089C RVB2Q12464 471 aaKnown RBP17.06■□□□□ 0.32
PTC2YER089C PAP2P53632 584 aaKnown RBP17.05■□□□□ 0.32
PTC2YER089C GAS4Q08271 471 aa17.03■□□□□ 0.32
PTC2YER089C SUI2P20459 304 aaKnown RBP17.02■□□□□ 0.32
PTC2YER089C YRB30P53107 440 aaPredicted RBP17.02■□□□□ 0.32
PTC2YER089C RPO41P13433 1351 aaKnown RBP17.01■□□□□ 0.31
PTC2YER089C DPS1P04802 557 aaKnown RBP17.01■□□□□ 0.31
PTC2YER089C PRD1P25375 712 aa17■□□□□ 0.31
PTC2YER089C THI22Q06490 572 aa16.95■□□□□ 0.3
PTC2YER089C SAP155P43612 1002 aa16.94■□□□□ 0.3
PTC2YER089C TY4B-HP0C2J7 1802 aa16.93■□□□□ 0.3
PTC2YER089C TY4B-JP47024 1803 aa16.93■□□□□ 0.3
PTC2YER089C FUN12P39730 1002 aaKnown RBP16.92■□□□□ 0.3
PTC2YER089C PTP3P40048 928 aa16.91■□□□□ 0.3
PTC2YER089C PRP5P21372 849 aaPredicted RBP16.89■□□□□ 0.3
PTC2YER089C BUB1P41695 1021 aaKnown RBP RIP-Chip data16.89■□□□□ 0.3not detected
PTC2YER089C NAB6Q03735 1134 aaKnown RBP RIP-Chip data16.89■□□□□ 0.3not detected
PTC2YER089C TPD3P31383 635 aa16.89■□□□□ 0.29
PTC2YER089C HEF3P53978 1044 aaKnown RBP16.89■□□□□ 0.29
PTC2YER089C AKL1P38080 1108 aaKnown RBP16.88■□□□□ 0.29
PTC2YER089C PRP45P28004 379 aaPredicted RBP16.87■□□□□ 0.29
PTC2YER089C YRF1-2P40105 1681 aa16.85■□□□□ 0.29
PTC2YER089C RTT109Q07794 436 aa16.84■□□□□ 0.29
PTC2YER089C SLM3Q12093 417 aa16.84■□□□□ 0.29
PTC2YER089C YRF1-4O13559 1382 aa16.84■□□□□ 0.29
PTC2YER089C APC1P53886 1748 aa16.83■□□□□ 0.28
PTC2YER089C DSD1P53095 428 aa16.82■□□□□ 0.28
PTC2YER089C MSB3P48566 633 aaPredicted RBP16.8■□□□□ 0.28
PTC2YER089C SIR4P11978 1358 aa16.79■□□□□ 0.28
PTC2YER089C YIL177CP40434 1758 aa16.78■□□□□ 0.28
PTC2YER089C YJL225CP40889 1758 aa16.78■□□□□ 0.28
PTC2YER089C YNL050CP53952 270 aa16.77■□□□□ 0.28
PTC2YER089C RRP5Q05022 1729 aaKnown RBP16.77■□□□□ 0.28
PTC2YER089C TFA1P36100 482 aa16.77■□□□□ 0.27
PTC2YER089C FPR3P38911 411 aaKnown RBP16.77■□□□□ 0.27
PTC2YER089C RAD2P07276 1031 aa16.76■□□□□ 0.27
PTC2YER089C NTH2P35172 780 aa16.76■□□□□ 0.27
PTC2YER089C YIL092WP40497 633 aa16.73■□□□□ 0.27
PTC2YER089C TCB1Q12466 1186 aa16.73■□□□□ 0.27
PTC2YER089C CTF4Q01454 927 aa16.72■□□□□ 0.27
PTC2YER089C HSP104P31539 908 aaKnown RBP16.71■□□□□ 0.27
PTC2YER089C BUD27P43573 796 aaKnown RBP RIP-Chip data16.71■□□□□ 0.27not detected
PTC2YER089C MAK21Q12176 1025 aaKnown RBP16.71■□□□□ 0.27
PTC2YER089C MAM1P40065 302 aa16.7■□□□□ 0.26
PTC2YER089C GYP7P48365 746 aa16.7■□□□□ 0.26
PTC2YER089C XKS1P42826 600 aa16.69■□□□□ 0.26
PTC2YER089C ZDS1P50111 915 aaKnown RBP16.69■□□□□ 0.26
PTC2YER089C URB1P34241 1764 aaKnown RBP16.69■□□□□ 0.26
PTC2YER089C FKS3Q04952 1785 aa16.69■□□□□ 0.26
PTC2YER089C DAL5P15365 543 aa16.68■□□□□ 0.26
PTC2YER089C YFR006WP43590 535 aa16.68■□□□□ 0.26
PTC2YER089C AOS1Q06624 347 aa16.68■□□□□ 0.26
PTC2YER089C RCR1P38212 213 aa16.65■□□□□ 0.26
PTC2YER089C RRT14P40470 206 aa16.65■□□□□ 0.26
PTC2YER089C RSF2P46974 1380 aa16.65■□□□□ 0.26
PTC2YER089C REB1P21538 810 aa16.64■□□□□ 0.25
PTC2YER089C ENT1Q12518 454 aa16.64■□□□□ 0.25
PTC2YER089C EDE1P34216 1381 aa16.61■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms