RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B ORC1P54784 914 aaPredicted RBP19.5■□□□□ 0.71
YER088W-BYER088W-B YIL055CP40523 627 aaKnown RBP19.49■□□□□ 0.71
YER088W-BYER088W-B PSK1P31374 1356 aa19.44■□□□□ 0.7
YER088W-BYER088W-B ENV9Q08651 330 aa19.44■□□□□ 0.7
YER088W-BYER088W-B RRP5Q05022 1729 aaKnown RBP19.42■□□□□ 0.7
YER088W-BYER088W-B PRP45P28004 379 aaPredicted RBP19.42■□□□□ 0.7
YER088W-BYER088W-B YLR419WQ06698 1435 aaKnown RBP19.42■□□□□ 0.7
YER088W-BYER088W-B GLN1P32288 370 aaKnown RBP19.41■□□□□ 0.7
YER088W-BYER088W-B CHZ1P40019 153 aaPredicted RBP19.39■□□□□ 0.69
YER088W-BYER088W-B ADE6P38972 1358 aaKnown RBP19.37■□□□□ 0.69
YER088W-BYER088W-B TY4B-HP0C2J7 1802 aa19.36■□□□□ 0.69
YER088W-BYER088W-B TY4B-JP47024 1803 aa19.36■□□□□ 0.69
YER088W-BYER088W-B PRP5P21372 849 aaPredicted RBP19.33■□□□□ 0.68
YER088W-BYER088W-B IMH1Q06704 911 aaKnown RBP19.31■□□□□ 0.68
YER088W-BYER088W-B LEU2P04173 364 aaPredicted RBP19.27■□□□□ 0.68
YER088W-BYER088W-B YRF1-2P40105 1681 aa19.25■□□□□ 0.67
YER088W-BYER088W-B SCT1P32784 759 aa19.24■□□□□ 0.67
YER088W-BYER088W-B MTR4P47047 1073 aaKnown RBP19.24■□□□□ 0.67
YER088W-BYER088W-B MSB3P48566 633 aaPredicted RBP19.23■□□□□ 0.67
YER088W-BYER088W-B PRP43P53131 767 aaKnown RBP19.22■□□□□ 0.67
YER088W-BYER088W-B CSE4P36012 229 aa19.21■□□□□ 0.67
YER088W-BYER088W-B YML133CQ03099 1374 aa19.2■□□□□ 0.66
YER088W-BYER088W-B YLL067CQ07888 1374 aa19.2■□□□□ 0.66
YER088W-BYER088W-B YLL066CQ99208 1374 aa19.2■□□□□ 0.66
YER088W-BYER088W-B YMR074CQ04773 145 aa19.2■□□□□ 0.66
YER088W-BYER088W-B RPS24AP0CX31 135 aaKnown RBP19.19■□□□□ 0.66
YER088W-BYER088W-B RPS24BP0CX32 135 aaKnown RBP19.19■□□□□ 0.66
YER088W-BYER088W-B FKH1P40466 484 aa19.12■□□□□ 0.65
YER088W-BYER088W-B SLM3Q12093 417 aa19.11■□□□□ 0.65
YER088W-BYER088W-B TCB1Q12466 1186 aa19.11■□□□□ 0.65
YER088W-BYER088W-B POL5P39985 1022 aaKnown RBP19.08■□□□□ 0.64
YER088W-BYER088W-B IES2P40154 320 aa19.07■□□□□ 0.64
YER088W-BYER088W-B RTG3P38165 486 aa19.05■□□□□ 0.64
YER088W-BYER088W-B LEU3P08638 886 aa19.04■□□□□ 0.64
YER088W-BYER088W-B RSF2P46974 1380 aa19.04■□□□□ 0.64
YER088W-BYER088W-B URB1P34241 1764 aaKnown RBP19.03■□□□□ 0.64
YER088W-BYER088W-B MLP1Q02455 1875 aaKnown RBP19.03■□□□□ 0.64
YER088W-BYER088W-B DOT5P40553 215 aa18.99■□□□□ 0.63
YER088W-BYER088W-B YIL177CP40434 1758 aa18.98■□□□□ 0.63
YER088W-BYER088W-B YJL225CP40889 1758 aa18.98■□□□□ 0.63
YER088W-BYER088W-B MHP1P43638 1398 aa18.98■□□□□ 0.63
YER088W-BYER088W-B BUD31P25337 157 aaPredicted RBP18.98■□□□□ 0.63
YER088W-BYER088W-B PRI1P10363 409 aa18.97■□□□□ 0.63
YER088W-BYER088W-B PDI1P17967 522 aaKnown RBP18.95■□□□□ 0.62
YER088W-BYER088W-B XKS1P42826 600 aa18.95■□□□□ 0.62
YER088W-BYER088W-B PDS5Q04264 1277 aa18.95■□□□□ 0.62
YER088W-BYER088W-B GAS4Q08271 471 aa18.95■□□□□ 0.62
YER088W-BYER088W-B DPS1P04802 557 aaKnown RBP18.94■□□□□ 0.62
YER088W-BYER088W-B RTF1P53064 558 aa18.94■□□□□ 0.62
YER088W-BYER088W-B YRF1-3P0CX14 1859 aa18.92■□□□□ 0.62
YER088W-BYER088W-B YRF1-7P0CX15 1859 aa18.92■□□□□ 0.62
YER088W-BYER088W-B YRF1-6P53819 1859 aa18.92■□□□□ 0.62
YER088W-BYER088W-B ROM2P51862 1356 aaKnown RBP18.92■□□□□ 0.62
YER088W-BYER088W-B FKS3Q04952 1785 aa18.91■□□□□ 0.62
YER088W-BYER088W-B ENP1P38333 483 aaKnown RBP18.91■□□□□ 0.62
YER088W-BYER088W-B RPN11P43588 306 aaKnown RBP18.91■□□□□ 0.62
YER088W-BYER088W-B FOX2Q02207 900 aaKnown RBP18.9■□□□□ 0.62
YER088W-BYER088W-B YKL133CP36066 463 aa18.87■□□□□ 0.61
YER088W-BYER088W-B APC1P53886 1748 aa18.87■□□□□ 0.61
YER088W-BYER088W-B TAP42Q04372 366 aa18.87■□□□□ 0.61
YER088W-BYER088W-B AUS1Q08409 1394 aa18.86■□□□□ 0.61
YER088W-BYER088W-B YEF3P16521 1044 aaKnown RBP18.84■□□□□ 0.61
YER088W-BYER088W-B UBP1P25037 809 aa18.83■□□□□ 0.6
YER088W-BYER088W-B HIM1Q06674 414 aa18.83■□□□□ 0.6
YER088W-BYER088W-B GRX4P32642 244 aa18.82■□□□□ 0.6
YER088W-BYER088W-B COBP00163 385 aa18.78■□□□□ 0.6
YER088W-BYER088W-B SEC3P33332 1336 aaKnown RBP18.77■□□□□ 0.6
YER088W-BYER088W-B RCR1P38212 213 aa18.77■□□□□ 0.6
YER088W-BYER088W-B NPR2P39923 615 aa18.77■□□□□ 0.6
YER088W-BYER088W-B YJL181WP46987 611 aa18.75■□□□□ 0.59
YER088W-BYER088W-B EDE1P34216 1381 aa18.74■□□□□ 0.59
YER088W-BYER088W-B LAM6Q08001 693 aa18.74■□□□□ 0.59
YER088W-BYER088W-B YRF1-4O13559 1382 aa18.73■□□□□ 0.59
YER088W-BYER088W-B SIR4P11978 1358 aa18.73■□□□□ 0.59
YER088W-BYER088W-B YKR075CP36155 307 aa18.72■□□□□ 0.59
YER088W-BYER088W-B KAR2P16474 682 aaKnown RBP18.7■□□□□ 0.58
YER088W-BYER088W-B PRP40P33203 583 aaKnown RBP18.7■□□□□ 0.58
YER088W-BYER088W-B LYS4P49367 693 aaPredicted RBP18.7■□□□□ 0.58
YER088W-BYER088W-B NST1P53935 1240 aa18.7■□□□□ 0.58
YER088W-BYER088W-B MEC3Q02574 474 aa18.7■□□□□ 0.58
YER088W-BYER088W-B FRK1Q03002 865 aaPredicted RBP18.69■□□□□ 0.58
YER088W-BYER088W-B ADE16P54113 591 aaKnown RBP18.68■□□□□ 0.58
YER088W-BYER088W-B YBL086CP38177 466 aa18.65■□□□□ 0.58
YER088W-BYER088W-B SNF2P22082 1703 aa18.65■□□□□ 0.58
YER088W-BYER088W-B TRK1P12685 1235 aa18.63■□□□□ 0.57
YER088W-BYER088W-B RPO41P13433 1351 aaKnown RBP18.63■□□□□ 0.57
YER088W-BYER088W-B BUB1P41695 1021 aaKnown RBP RIP-Chip data18.62■□□□□ 0.57not detected
YER088W-BYER088W-B GTT3P39996 337 aa18.58■□□□□ 0.56
YER088W-BYER088W-B PSD2P53037 1138 aaKnown RBP18.58■□□□□ 0.56
YER088W-BYER088W-B PAP2P53632 584 aaKnown RBP18.58■□□□□ 0.56
YER088W-BYER088W-B UGA2P38067 497 aa18.56■□□□□ 0.56
YER088W-BYER088W-B ATG13Q06628 738 aa18.56■□□□□ 0.56
YER088W-BYER088W-B INP54Q08227 384 aaKnown RBP18.56■□□□□ 0.56
YER088W-BYER088W-B ALD2P47771 506 aa18.55■□□□□ 0.56
YER088W-BYER088W-B CTH1P47976 325 aa18.55■□□□□ 0.56
YER088W-BYER088W-B DSD1P53095 428 aa18.55■□□□□ 0.56
YER088W-BYER088W-B SSA2P10592 639 aaKnown RBP18.52■□□□□ 0.56
YER088W-BYER088W-B OSM1P21375 501 aaKnown RBP18.51■□□□□ 0.55
YER088W-BYER088W-B HSP104P31539 908 aaKnown RBP18.5■□□□□ 0.55
YER088W-BYER088W-B AKL1P38080 1108 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms