RNA–Protein interactions for RNA: YER058W

PET117, Transcript of Protein required for assembly of cytochrome c oxidase, yeastyeast

Gene PET117, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET117YER058W THI5P43534 340 aa9.37□□□□□ -0.91
PET117YER058W THI11P47183 340 aa9.37□□□□□ -0.91
PET117YER058W THI13Q07748 340 aa9.37□□□□□ -0.91
PET117YER058W FKH1P40466 484 aa9.36□□□□□ -0.91
PET117YER058W ENP1P38333 483 aaKnown RBP9.34□□□□□ -0.91
PET117YER058W PPH3P32345 308 aa9.33□□□□□ -0.92
PET117YER058W RTG3P38165 486 aa9.32□□□□□ -0.92
PET117YER058W PSD2P53037 1138 aaKnown RBP9.32□□□□□ -0.92
PET117YER058W YML133CQ03099 1374 aa9.31□□□□□ -0.92
PET117YER058W YLL067CQ07888 1374 aa9.31□□□□□ -0.92
PET117YER058W YLL066CQ99208 1374 aa9.31□□□□□ -0.92
PET117YER058W LEU2P04173 364 aaPredicted RBP9.3□□□□□ -0.92
PET117YER058W MTR4P47047 1073 aaKnown RBP9.3□□□□□ -0.92
PET117YER058W YFR006WP43590 535 aa9.29□□□□□ -0.92
PET117YER058W ADE6P38972 1358 aaKnown RBP9.27□□□□□ -0.93
PET117YER058W MLP1Q02455 1875 aaKnown RBP9.26□□□□□ -0.93
PET117YER058W LEU3P08638 886 aa9.25□□□□□ -0.93
PET117YER058W PDI1P17967 522 aaKnown RBP9.25□□□□□ -0.93
PET117YER058W PRP43P53131 767 aaKnown RBP9.25□□□□□ -0.93
PET117YER058W RTF1P53064 558 aa9.24□□□□□ -0.93
PET117YER058W TAP42Q04372 366 aa9.24□□□□□ -0.93
PET117YER058W IOC4Q04213 475 aa9.23□□□□□ -0.93
PET117YER058W GRX4P32642 244 aa9.22□□□□□ -0.93
PET117YER058W NST1P53935 1240 aa9.22□□□□□ -0.93
PET117YER058W NSR1P27476 414 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94 RIP-Chip
PET117YER058W CSE4P36012 229 aa9.2□□□□□ -0.94
PET117YER058W PTP3P40048 928 aa9.2□□□□□ -0.94
PET117YER058W KAR2P16474 682 aaKnown RBP9.19□□□□□ -0.94
PET117YER058W RPS24AP0CX31 135 aaKnown RBP9.18□□□□□ -0.94
PET117YER058W RPS24BP0CX32 135 aaKnown RBP9.18□□□□□ -0.94
PET117YER058W YEF3P16521 1044 aaKnown RBP9.18□□□□□ -0.94
PET117YER058W TRK1P12685 1235 aa9.16□□□□□ -0.94
PET117YER058W AUS1Q08409 1394 aa9.14□□□□□ -0.95
PET117YER058W RPP0P05317 312 aaKnown RBP9.13□□□□□ -0.95
PET117YER058W PRP5P21372 849 aaPredicted RBP9.13□□□□□ -0.95
PET117YER058W PRP45P28004 379 aaPredicted RBP9.13□□□□□ -0.95
PET117YER058W DPS1P04802 557 aaKnown RBP9.12□□□□□ -0.95
PET117YER058W HIM1Q06674 414 aa9.12□□□□□ -0.95
PET117YER058W RPO41P13433 1351 aaKnown RBP9.12□□□□□ -0.95
PET117YER058W GAS4Q08271 471 aa9.11□□□□□ -0.95
PET117YER058W PRS1P32895 427 aaKnown RBP9.1□□□□□ -0.95
PET117YER058W PAP2P53632 584 aaKnown RBP9.1□□□□□ -0.95
PET117YER058W TY4B-HP0C2J7 1802 aa9.1□□□□□ -0.95
PET117YER058W TY4B-JP47024 1803 aa9.1□□□□□ -0.95
PET117YER058W SLM3Q12093 417 aa9.08□□□□□ -0.96
PET117YER058W YAH1Q12184 172 aaKnown RBP9.08□□□□□ -0.96
PET117YER058W RRP5Q05022 1729 aaKnown RBP9.08□□□□□ -0.96
PET117YER058W RTR1P40084 226 aaPredicted RBP9.07□□□□□ -0.96
PET117YER058W VPS27P40343 622 aaKnown RBP9.07□□□□□ -0.96
PET117YER058W YDL144CQ07589 356 aa9.07□□□□□ -0.96
PET117YER058W YRF1-2P40105 1681 aa9.07□□□□□ -0.96
PET117YER058W SNF2P22082 1703 aa9.06□□□□□ -0.96
PET117YER058W MSB3P48566 633 aaPredicted RBP9.06□□□□□ -0.96
PET117YER058W CDC45Q08032 650 aa9.06□□□□□ -0.96
PET117YER058W TCB1Q12466 1186 aa9.06□□□□□ -0.96
PET117YER058W REB1P21538 810 aa9.05□□□□□ -0.96
PET117YER058W RRP46P53256 223 aaPredicted RBP9.05□□□□□ -0.96
PET117YER058W ENT1Q12518 454 aa9.05□□□□□ -0.96
PET117YER058W RSF2P46974 1380 aa9.03□□□□□ -0.96
PET117YER058W PRD1P25375 712 aa9.02□□□□□ -0.97
PET117YER058W MPP10P47083 593 aaKnown RBP9.02□□□□□ -0.97
PET117YER058W YRB30P53107 440 aaPredicted RBP9.02□□□□□ -0.97
PET117YER058W AKL1P38080 1108 aaKnown RBP9.01□□□□□ -0.97
PET117YER058W BUB1P41695 1021 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
PET117YER058W XKS1P42826 600 aa9□□□□□ -0.97
PET117YER058W DSD1P53095 428 aa9□□□□□ -0.97
PET117YER058W CTF4Q01454 927 aa9□□□□□ -0.97
PET117YER058W ENV9Q08651 330 aa9□□□□□ -0.97
PET117YER058W SIR4P11978 1358 aa8.99□□□□□ -0.97
PET117YER058W APP1P53933 587 aa8.99□□□□□ -0.97
PET117YER058W APC1P53886 1748 aa8.99□□□□□ -0.97
PET117YER058W YRF1-4O13559 1382 aa8.98□□□□□ -0.97
PET117YER058W FKS3Q04952 1785 aa8.97□□□□□ -0.97
PET117YER058W THI22Q06490 572 aa8.97□□□□□ -0.97
PET117YER058W IMH1Q06704 911 aaKnown RBP8.97□□□□□ -0.97
PET117YER058W SUI2P20459 304 aaKnown RBP8.96□□□□□ -0.98
PET117YER058W IES2P40154 320 aa8.96□□□□□ -0.98
PET117YER058W MEC3Q02574 474 aa8.96□□□□□ -0.98
PET117YER058W RVB2Q12464 471 aaKnown RBP8.96□□□□□ -0.98
PET117YER058W YIL177CP40434 1758 aa8.95□□□□□ -0.98
PET117YER058W YJL225CP40889 1758 aa8.95□□□□□ -0.98
PET117YER058W HSP104P31539 908 aaKnown RBP8.95□□□□□ -0.98
PET117YER058W RCR1P38212 213 aa8.95□□□□□ -0.98
PET117YER058W SAP155P43612 1002 aa8.95□□□□□ -0.98
PET117YER058W YNL050CP53952 270 aa8.95□□□□□ -0.98
PET117YER058W AOS1Q06624 347 aa8.95□□□□□ -0.98
PET117YER058W URB1P34241 1764 aaKnown RBP8.94□□□□□ -0.98
PET117YER058W ROM2P51862 1356 aaKnown RBP8.94□□□□□ -0.98
PET117YER058W TPD3P31383 635 aa8.93□□□□□ -0.98
PET117YER058W NTH2P35172 780 aa8.93□□□□□ -0.98
PET117YER058W MAM1P40065 302 aa8.93□□□□□ -0.98
PET117YER058W YFR016CP43597 1233 aaKnown RBP8.93□□□□□ -0.98
PET117YER058W HEF3P53978 1044 aaKnown RBP8.93□□□□□ -0.98
PET117YER058W ZDS1P50111 915 aaKnown RBP8.91□□□□□ -0.98
PET117YER058W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
PET117YER058W RTT109Q07794 436 aa8.91□□□□□ -0.98
PET117YER058W YKL133CP36066 463 aa8.9□□□□□ -0.98
PET117YER058W YIL055CP40523 627 aaKnown RBP8.9□□□□□ -0.98
PET117YER058W GYP7P48365 746 aa8.9□□□□□ -0.98
PET117YER058W EDE1P34216 1381 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms