RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C CPS1P27614 576 aa14.49□□□□□ -0.09
SPC25YER018C PDS5Q04264 1277 aa14.46□□□□□ -0.09
SPC25YER018C PSK1P31374 1356 aa14.44□□□□□ -0.1
SPC25YER018C MLP1Q02455 1875 aaKnown RBP14.43□□□□□ -0.1
SPC25YER018C RTG3P38165 486 aa14.4□□□□□ -0.1
SPC25YER018C FKH1P40466 484 aa14.38□□□□□ -0.11
SPC25YER018C SEC3P33332 1336 aaKnown RBP14.36□□□□□ -0.11
SPC25YER018C LEU2P04173 364 aaPredicted RBP14.35□□□□□ -0.11
SPC25YER018C PSD2P53037 1138 aaKnown RBP14.33□□□□□ -0.12
SPC25YER018C SPT7P35177 1332 aa14.33□□□□□ -0.12
SPC25YER018C YML133CQ03099 1374 aa14.33□□□□□ -0.12
SPC25YER018C YLL067CQ07888 1374 aa14.33□□□□□ -0.12
SPC25YER018C YLL066CQ99208 1374 aa14.33□□□□□ -0.12
SPC25YER018C PTP3P40048 928 aa14.32□□□□□ -0.12
SPC25YER018C LEU3P08638 886 aa14.31□□□□□ -0.12
SPC25YER018C MTR4P47047 1073 aaKnown RBP14.31□□□□□ -0.12
SPC25YER018C TY4B-HP0C2J7 1802 aa14.3□□□□□ -0.12
SPC25YER018C TY4B-JP47024 1803 aa14.3□□□□□ -0.12
SPC25YER018C CSE4P36012 229 aa14.3□□□□□ -0.12
SPC25YER018C ADE6P38972 1358 aaKnown RBP14.28□□□□□ -0.12
SPC25YER018C RPS24AP0CX31 135 aaKnown RBP14.26□□□□□ -0.13
SPC25YER018C RPS24BP0CX32 135 aaKnown RBP14.26□□□□□ -0.13
SPC25YER018C NST1P53935 1240 aa14.26□□□□□ -0.13
SPC25YER018C PRP45P28004 379 aaPredicted RBP14.24□□□□□ -0.13
SPC25YER018C RRP5Q05022 1729 aaKnown RBP14.22□□□□□ -0.13
SPC25YER018C PRP43P53131 767 aaKnown RBP14.22□□□□□ -0.13
SPC25YER018C PDI1P17967 522 aaKnown RBP14.21□□□□□ -0.13
SPC25YER018C RTF1P53064 558 aa14.21□□□□□ -0.13
SPC25YER018C PRP5P21372 849 aaPredicted RBP14.2□□□□□ -0.14
SPC25YER018C REB1P21538 810 aa14.17□□□□□ -0.14
SPC25YER018C APP1P53933 587 aa14.17□□□□□ -0.14
SPC25YER018C GAS4Q08271 471 aa14.16□□□□□ -0.14
SPC25YER018C YAH1Q12184 172 aaKnown RBP14.16□□□□□ -0.14
SPC25YER018C ENT1Q12518 454 aa14.16□□□□□ -0.14
SPC25YER018C TAP42Q04372 366 aa14.15□□□□□ -0.14
SPC25YER018C DPS1P04802 557 aaKnown RBP14.14□□□□□ -0.15
SPC25YER018C YEF3P16521 1044 aaKnown RBP14.14□□□□□ -0.15
SPC25YER018C HIM1Q06674 414 aa14.14□□□□□ -0.15
SPC25YER018C KAR2P16474 682 aaKnown RBP14.13□□□□□ -0.15
SPC25YER018C TRK1P12685 1235 aa14.12□□□□□ -0.15
SPC25YER018C GRX4P32642 244 aa14.12□□□□□ -0.15
SPC25YER018C MSB3P48566 633 aaPredicted RBP14.11□□□□□ -0.15
SPC25YER018C ENP1P38333 483 aaKnown RBP14.1□□□□□ -0.15
SPC25YER018C AUS1Q08409 1394 aa14.09□□□□□ -0.15
SPC25YER018C ENV9Q08651 330 aa14.08□□□□□ -0.16
SPC25YER018C YIL177CP40434 1758 aa14.07□□□□□ -0.16
SPC25YER018C YJL225CP40889 1758 aa14.07□□□□□ -0.16
SPC25YER018C PAP2P53632 584 aaKnown RBP14.07□□□□□ -0.16
SPC25YER018C SLM3Q12093 417 aa14.07□□□□□ -0.16
SPC25YER018C YRF1-2P40105 1681 aa14.07□□□□□ -0.16
SPC25YER018C TCB1Q12466 1186 aa14.06□□□□□ -0.16
SPC25YER018C URB1P34241 1764 aaKnown RBP14.01□□□□□ -0.17
SPC25YER018C FKS3Q04952 1785 aa14.01□□□□□ -0.17
SPC25YER018C XKS1P42826 600 aa13.99□□□□□ -0.17
SPC25YER018C IMH1Q06704 911 aaKnown RBP13.99□□□□□ -0.17
SPC25YER018C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.98□□□□□ -0.17not detected
SPC25YER018C RPO41P13433 1351 aaKnown RBP13.97□□□□□ -0.17
SPC25YER018C NSR1P27476 414 aaKnown RBP RIP-Chip data13.97□□□□□ -0.17 RIP-Chip
SPC25YER018C SNF2P22082 1703 aa13.96□□□□□ -0.17
SPC25YER018C RSF2P46974 1380 aa13.96□□□□□ -0.18
SPC25YER018C IES2P40154 320 aa13.95□□□□□ -0.18
SPC25YER018C YIL055CP40523 627 aaKnown RBP13.95□□□□□ -0.18
SPC25YER018C RRP46P53256 223 aaPredicted RBP13.94□□□□□ -0.18
SPC25YER018C APC1P53886 1748 aa13.94□□□□□ -0.18
SPC25YER018C RTR1P40084 226 aaPredicted RBP13.93□□□□□ -0.18
SPC25YER018C IOC4Q04213 475 aa13.92□□□□□ -0.18
SPC25YER018C RCR1P38212 213 aa13.89□□□□□ -0.19
SPC25YER018C YDL144CQ07589 356 aa13.89□□□□□ -0.19
SPC25YER018C AKL1P38080 1108 aaKnown RBP13.88□□□□□ -0.19
SPC25YER018C MPP10P47083 593 aaKnown RBP13.88□□□□□ -0.19
SPC25YER018C DSD1P53095 428 aa13.88□□□□□ -0.19
SPC25YER018C YRF1-3P0CX14 1859 aa13.88□□□□□ -0.19
SPC25YER018C YRF1-7P0CX15 1859 aa13.88□□□□□ -0.19
SPC25YER018C YRF1-6P53819 1859 aa13.88□□□□□ -0.19
SPC25YER018C HSP104P31539 908 aaKnown RBP13.86□□□□□ -0.19
SPC25YER018C YKL133CP36066 463 aa13.85□□□□□ -0.19
SPC25YER018C PRD1P25375 712 aa13.83□□□□□ -0.2
SPC25YER018C SIR4P11978 1358 aa13.83□□□□□ -0.2
SPC25YER018C RPP0P05317 312 aaKnown RBP13.81□□□□□ -0.2
SPC25YER018C PRS1P32895 427 aaKnown RBP13.81□□□□□ -0.2
SPC25YER018C MEC3Q02574 474 aa13.81□□□□□ -0.2
SPC25YER018C ROM2P51862 1356 aaKnown RBP13.81□□□□□ -0.2
SPC25YER018C DOT5P40553 215 aa13.8□□□□□ -0.2
SPC25YER018C YRF1-4O13559 1382 aa13.8□□□□□ -0.2
SPC25YER018C VPS27P40343 622 aaKnown RBP13.79□□□□□ -0.2
SPC25YER018C GLN1P32288 370 aaKnown RBP13.78□□□□□ -0.2
SPC25YER018C CTF4Q01454 927 aa13.78□□□□□ -0.2
SPC25YER018C THI22Q06490 572 aa13.78□□□□□ -0.2
SPC25YER018C NTH2P35172 780 aa13.77□□□□□ -0.21
SPC25YER018C ADE16P54113 591 aaKnown RBP13.77□□□□□ -0.21
SPC25YER018C AOS1Q06624 347 aa13.77□□□□□ -0.21
SPC25YER018C CDC45Q08032 650 aa13.77□□□□□ -0.21
SPC25YER018C SAP155P43612 1002 aa13.76□□□□□ -0.21
SPC25YER018C FOX2Q02207 900 aaKnown RBP13.76□□□□□ -0.21
SPC25YER018C FRK1Q03002 865 aaPredicted RBP13.76□□□□□ -0.21
SPC25YER018C TPD3P31383 635 aa13.75□□□□□ -0.21
SPC25YER018C YMR074CQ04773 145 aa13.75□□□□□ -0.21
SPC25YER018C INP54Q08227 384 aaKnown RBP13.75□□□□□ -0.21
SPC25YER018C COBP00163 385 aa13.74□□□□□ -0.21
SPC25YER018C ATG13Q06628 738 aa13.74□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 378.1 ms