RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W TY1A-AP0CX57 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-PR1P0CX58 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-ORP0CX59 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-PR2P0CX60 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-DR5P0CX65 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-ER2P0CX66 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-GR3P0CX67 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-LR1P0CX68 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-MR2P0CX69 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-JR2P47099 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-DR1Q03856 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-ML1Q04706 440 aaKnown RBP4.97□□□□□ -1.61
SNX41YDR425W TY1A-BRQ12217 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-NL2Q12470 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-GR2Q12485 440 aa4.97□□□□□ -1.61
SNX41YDR425W PRT1P06103 763 aaKnown RBP4.96□□□□□ -1.61
SNX41YDR425W SEC2P17065 759 aa4.96□□□□□ -1.61
SNX41YDR425W NPL4P33755 580 aa4.96□□□□□ -1.61
SNX41YDR425W RTF1P53064 558 aa4.96□□□□□ -1.61
SNX41YDR425W NIS1P53939 407 aa4.96□□□□□ -1.61
SNX41YDR425W GYP1Q08484 637 aa4.94□□□□□ -1.62
SNX41YDR425W SDH2P21801 266 aa4.94□□□□□ -1.62
SNX41YDR425W FPK1P53739 893 aa4.94□□□□□ -1.62
SNX41YDR425W KEX2P13134 814 aa4.93□□□□□ -1.62
SNX41YDR425W GCD11P32481 527 aaKnown RBP4.93□□□□□ -1.62
SNX41YDR425W YNL115CP53925 644 aa4.93□□□□□ -1.62
SNX41YDR425W ERF2Q06551 359 aa4.93□□□□□ -1.62
SNX41YDR425W HST2P53686 357 aa4.92□□□□□ -1.62
SNX41YDR425W KIN1P13185 1064 aa4.91□□□□□ -1.62
SNX41YDR425W AGE1Q04412 482 aa4.91□□□□□ -1.62
SNX41YDR425W MRF1P30775 413 aaPredicted RBP4.9□□□□□ -1.62
SNX41YDR425W YMR196WQ04336 1088 aa4.9□□□□□ -1.63
SNX41YDR425W LEO1P38439 464 aa4.88□□□□□ -1.63
SNX41YDR425W GLN1P32288 370 aaKnown RBP4.88□□□□□ -1.63
SNX41YDR425W TUB4P53378 473 aa4.88□□□□□ -1.63
SNX41YDR425W AMS1P22855 1083 aa4.87□□□□□ -1.63
SNX41YDR425W PAT1P25644 796 aaKnown RBP4.87□□□□□ -1.63
SNX41YDR425W KTR1P27810 393 aaKnown RBP4.87□□□□□ -1.63
SNX41YDR425W SPT16P32558 1035 aaKnown RBP4.87□□□□□ -1.63
SNX41YDR425W RRN7P40992 514 aa4.87□□□□□ -1.63
SNX41YDR425W MMP1Q12372 583 aa4.87□□□□□ -1.63
SNX41YDR425W SLY41P22215 453 aa4.86□□□□□ -1.63
SNX41YDR425W SCJ1P25303 377 aa4.86□□□□□ -1.63
SNX41YDR425W PAC1P39946 494 aaKnown RBP4.86□□□□□ -1.63
SNX41YDR425W CSN12P47130 423 aa4.86□□□□□ -1.63
SNX41YDR425W MOD5P07884 428 aa4.85□□□□□ -1.63
SNX41YDR425W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
SNX41YDR425W YEL077CQ3E7X8 1277 aa4.85□□□□□ -1.63
SNX41YDR425W SRC1Q03707 834 aa4.84□□□□□ -1.63
SNX41YDR425W ERG12P07277 443 aa4.83□□□□□ -1.64
SNX41YDR425W PUS6P53294 404 aa4.83□□□□□ -1.64
SNX41YDR425W TYW1Q08960 810 aaKnown RBP4.83□□□□□ -1.64
SNX41YDR425W RAS1P01119 309 aa4.83□□□□□ -1.64
SNX41YDR425W SSA2P10592 639 aaKnown RBP4.83□□□□□ -1.64
SNX41YDR425W ESS1P22696 170 aa4.83□□□□□ -1.64
SNX41YDR425W TPD3P31383 635 aa4.83□□□□□ -1.64
SNX41YDR425W RSC30P38781 883 aa4.83□□□□□ -1.64
SNX41YDR425W GUA1P38625 525 aaKnown RBP4.82□□□□□ -1.64
SNX41YDR425W LAM6Q08001 693 aa4.82□□□□□ -1.64
SNX41YDR425W TRM1P15565 570 aaKnown RBP4.81□□□□□ -1.64
SNX41YDR425W CST6P40535 587 aa4.81□□□□□ -1.64
SNX41YDR425W YJU3P28321 313 aa4.81□□□□□ -1.64
SNX41YDR425W RPA14P50106 137 aa4.81□□□□□ -1.64
SNX41YDR425W HPC2Q01448 625 aa4.81□□□□□ -1.64
SNX41YDR425W PDC1P06169 563 aaKnown RBP4.79□□□□□ -1.64
SNX41YDR425W BDP1P46678 594 aa4.79□□□□□ -1.64
SNX41YDR425W YPR097WQ06839 1073 aa4.79□□□□□ -1.64
SNX41YDR425W HXT10P43581 546 aa4.79□□□□□ -1.64
SNX41YDR425W KXD1P53158 218 aa4.79□□□□□ -1.64
SNX41YDR425W TBF1Q02457 562 aa4.79□□□□□ -1.64
SNX41YDR425W PKH3Q03306 898 aaPredicted RBP4.79□□□□□ -1.64
SNX41YDR425W YDL206WQ12424 762 aa4.79□□□□□ -1.64
SNX41YDR425W RRD1P40454 393 aaKnown RBP4.78□□□□□ -1.64
SNX41YDR425W ALR1Q08269 859 aa4.78□□□□□ -1.64
SNX41YDR425W RAD59Q12223 238 aa4.77□□□□□ -1.65
SNX41YDR425W ARG8P18544 423 aa4.75□□□□□ -1.65
SNX41YDR425W FRK1Q03002 865 aaPredicted RBP4.75□□□□□ -1.65
SNX41YDR425W HED1Q03937 162 aa4.75□□□□□ -1.65
SNX41YDR425W CSE4P36012 229 aa4.73□□□□□ -1.65
SNX41YDR425W CLA4P48562 842 aa4.73□□□□□ -1.65
SNX41YDR425W TFB3Q03290 321 aa4.73□□□□□ -1.65
SNX41YDR425W MAK16P10962 306 aaPredicted RBP4.72□□□□□ -1.65
SNX41YDR425W CDC4P07834 779 aa4.71□□□□□ -1.66
SNX41YDR425W TRK1P12685 1235 aa4.71□□□□□ -1.66
SNX41YDR425W VAC17P25591 423 aa4.71□□□□□ -1.66
SNX41YDR425W BRL1P38770 471 aa4.71□□□□□ -1.66
SNX41YDR425W PUS5Q06244 254 aa4.71□□□□□ -1.66
SNX41YDR425W AIR1P40507 360 aaKnown RBP4.71□□□□□ -1.66
SNX41YDR425W NAF1P53919 492 aaKnown RBP4.7□□□□□ -1.66
SNX41YDR425W SYH1Q02875 849 aaKnown RBP4.7□□□□□ -1.66
SNX41YDR425W PKC1P24583 1151 aa4.69□□□□□ -1.66
SNX41YDR425W FIG4P42837 879 aa4.69□□□□□ -1.66
SNX41YDR425W MET32Q12041 191 aa4.68□□□□□ -1.66
SNX41YDR425W SPT5P27692 1063 aaKnown RBP4.67□□□□□ -1.66
SNX41YDR425W MRT4P33201 236 aaKnown RBP4.67□□□□□ -1.66
SNX41YDR425W YPR084WQ06821 456 aa4.67□□□□□ -1.66
SNX41YDR425W YBL036CP38197 257 aa4.66□□□□□ -1.66
SNX41YDR425W HGH1P48362 394 aaKnown RBP4.66□□□□□ -1.66
SNX41YDR425W AFT1P22149 690 aa4.66□□□□□ -1.66
SNX41YDR425W KIP2P28743 706 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms