RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C GCD11P32481 527 aaKnown RBP7.96□□□□□ -1.14
RPB7YDR404C TEA1P47988 759 aa7.96□□□□□ -1.14
RPB7YDR404C BUD20Q08004 166 aaPredicted RBP7.96□□□□□ -1.14
RPB7YDR404C TY1B-DR4Q07793 1604 aa7.96□□□□□ -1.14
RPB7YDR404C MRF1P30775 413 aaPredicted RBP7.93□□□□□ -1.14
RPB7YDR404C ATF2P53296 535 aa7.92□□□□□ -1.14
RPB7YDR404C YNR021WP53723 404 aaKnown RBP7.91□□□□□ -1.14
RPB7YDR404C KEX2P13134 814 aa7.89□□□□□ -1.15
RPB7YDR404C PAT1P25644 796 aaKnown RBP7.89□□□□□ -1.15
RPB7YDR404C SPT16P32558 1035 aaKnown RBP7.89□□□□□ -1.15
RPB7YDR404C GLC3P32775 704 aa7.88□□□□□ -1.15
RPB7YDR404C YEL077CQ3E7X8 1277 aa7.88□□□□□ -1.15
RPB7YDR404C TY1A-DR4O74302 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-HP0C2I4 478 aaKnown RBP7.87□□□□□ -1.15
RPB7YDR404C TY1A-AP0CX57 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-PR1P0CX58 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-ORP0CX59 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-PR2P0CX60 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-DR5P0CX65 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-ER2P0CX66 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-GR3P0CX67 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-LR1P0CX68 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-MR2P0CX69 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-JR2P47099 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-DR1Q03856 440 aa7.87□□□□□ -1.15
RPB7YDR404C YMR196WQ04336 1088 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-ML1Q04706 440 aaKnown RBP7.87□□□□□ -1.15
RPB7YDR404C TY1A-BRQ12217 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-NL2Q12470 440 aa7.87□□□□□ -1.15
RPB7YDR404C TY1A-GR2Q12485 440 aa7.87□□□□□ -1.15
RPB7YDR404C ERG12P07277 443 aa7.86□□□□□ -1.15
RPB7YDR404C KIN1P13185 1064 aa7.85□□□□□ -1.15
RPB7YDR404C RRN7P40992 514 aa7.85□□□□□ -1.15
RPB7YDR404C NIS1P53939 407 aa7.85□□□□□ -1.15
RPB7YDR404C SEC2P17065 759 aa7.84□□□□□ -1.15
RPB7YDR404C AMS1P22855 1083 aa7.84□□□□□ -1.15
RPB7YDR404C SPA2P23201 1466 aaKnown RBP7.83□□□□□ -1.16
RPB7YDR404C RTF1P53064 558 aa7.83□□□□□ -1.16
RPB7YDR404C TCB3Q03640 1545 aaKnown RBP7.83□□□□□ -1.16
RPB7YDR404C YNL115CP53925 644 aa7.82□□□□□ -1.16
RPB7YDR404C ERF2Q06551 359 aa7.82□□□□□ -1.16
RPB7YDR404C RAS1P01119 309 aa7.81□□□□□ -1.16
RPB7YDR404C SDH2P21801 266 aa7.8□□□□□ -1.16
RPB7YDR404C AIM7Q12156 149 aa7.8□□□□□ -1.16
RPB7YDR404C SIT4P20604 311 aa7.79□□□□□ -1.16
RPB7YDR404C FPK1P53739 893 aa7.79□□□□□ -1.16
RPB7YDR404C RLF2Q12495 606 aa7.78□□□□□ -1.16
RPB7YDR404C SLY41P22215 453 aa7.77□□□□□ -1.17
RPB7YDR404C TUB4P53378 473 aa7.76□□□□□ -1.17
RPB7YDR404C PAC1P39946 494 aaKnown RBP7.73□□□□□ -1.17
RPB7YDR404C HST2P53686 357 aa7.73□□□□□ -1.17
RPB7YDR404C TBF1Q02457 562 aa7.73□□□□□ -1.17
RPB7YDR404C FRK1Q03002 865 aaPredicted RBP7.73□□□□□ -1.17
RPB7YDR404C MMP1Q12372 583 aa7.73□□□□□ -1.17
RPB7YDR404C GLN1P32288 370 aaKnown RBP7.72□□□□□ -1.17
RPB7YDR404C CST6P40535 587 aa7.72□□□□□ -1.17
RPB7YDR404C AGE1Q04412 482 aa7.71□□□□□ -1.18
RPB7YDR404C SCJ1P25303 377 aa7.69□□□□□ -1.18
RPB7YDR404C GUA1P38625 525 aaKnown RBP7.69□□□□□ -1.18
RPB7YDR404C BDP1P46678 594 aa7.69□□□□□ -1.18
RPB7YDR404C KXD1P53158 218 aa7.69□□□□□ -1.18
RPB7YDR404C LAM6Q08001 693 aa7.69□□□□□ -1.18
RPB7YDR404C HGH1P48362 394 aaKnown RBP7.67□□□□□ -1.18
RPB7YDR404C PUS6P53294 404 aa7.67□□□□□ -1.18
RPB7YDR404C TRK1P12685 1235 aa7.66□□□□□ -1.18
RPB7YDR404C ESS1P22696 170 aa7.66□□□□□ -1.18
RPB7YDR404C CSN12P47130 423 aa7.66□□□□□ -1.18
RPB7YDR404C SRC1Q03707 834 aa7.66□□□□□ -1.18
RPB7YDR404C TYW1Q08960 810 aaKnown RBP7.65□□□□□ -1.18
RPB7YDR404C TRM1P15565 570 aaKnown RBP7.63□□□□□ -1.19
RPB7YDR404C PKH3Q03306 898 aaPredicted RBP7.63□□□□□ -1.19
RPB7YDR404C YDL206WQ12424 762 aa7.63□□□□□ -1.19
RPB7YDR404C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
RPB7YDR404C ALR1Q08269 859 aa7.62□□□□□ -1.19
RPB7YDR404C MOD5P07884 428 aa7.61□□□□□ -1.19
RPB7YDR404C SSA2P10592 639 aaKnown RBP7.61□□□□□ -1.19
RPB7YDR404C YJU3P28321 313 aa7.6□□□□□ -1.19
RPB7YDR404C RPA14P50106 137 aa7.6□□□□□ -1.19
RPB7YDR404C PDC1P06169 563 aaKnown RBP7.59□□□□□ -1.19
RPB7YDR404C ARG8P18544 423 aa7.59□□□□□ -1.19
RPB7YDR404C RRD1P40454 393 aaKnown RBP7.59□□□□□ -1.19
RPB7YDR404C AIR1P40507 360 aaKnown RBP7.59□□□□□ -1.19
RPB7YDR404C HXT10P43581 546 aa7.59□□□□□ -1.19
RPB7YDR404C CLA4P48562 842 aa7.59□□□□□ -1.19
RPB7YDR404C HPC2Q01448 625 aa7.59□□□□□ -1.19
RPB7YDR404C HED1Q03937 162 aa7.59□□□□□ -1.19
RPB7YDR404C PUS5Q06244 254 aa7.59□□□□□ -1.19
RPB7YDR404C HSL1P34244 1518 aa7.58□□□□□ -1.2
RPB7YDR404C KTR1P27810 393 aaKnown RBP7.58□□□□□ -1.2
RPB7YDR404C YPR097WQ06839 1073 aa7.57□□□□□ -1.2
RPB7YDR404C ECM5Q03214 1411 aa7.57□□□□□ -1.2
RPB7YDR404C CDC4P07834 779 aa7.56□□□□□ -1.2
RPB7YDR404C TPD3P31383 635 aa7.56□□□□□ -1.2
RPB7YDR404C SPT6P23615 1451 aaKnown RBP7.55□□□□□ -1.2
RPB7YDR404C TFB3Q03290 321 aa7.55□□□□□ -1.2
RPB7YDR404C SYH1Q02875 849 aaKnown RBP7.54□□□□□ -1.2
RPB7YDR404C KIP2P28743 706 aa7.53□□□□□ -1.2
RPB7YDR404C RAD59Q12223 238 aa7.52□□□□□ -1.21
RPB7YDR404C GCR2Q01722 534 aa7.51□□□□□ -1.21
RPB7YDR404C RSC30P38781 883 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms