RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W GCD11P32481 527 aaKnown RBP8.34□□□□□ -1.07
TRS23YDR246W KEX2P13134 814 aa8.33□□□□□ -1.08
TRS23YDR246W YMR196WQ04336 1088 aa8.33□□□□□ -1.08
TRS23YDR246W SSN2P38931 1420 aa8.32□□□□□ -1.08
TRS23YDR246W TY1A-DR4O74302 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-HP0C2I4 478 aaKnown RBP8.31□□□□□ -1.08
TRS23YDR246W TY1A-AP0CX57 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-PR1P0CX58 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-ORP0CX59 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-PR2P0CX60 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-DR5P0CX65 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-ER2P0CX66 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-GR3P0CX67 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-LR1P0CX68 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-MR2P0CX69 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-JR2P47099 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-DR1Q03856 440 aa8.31□□□□□ -1.08
TRS23YDR246W SAS4Q04003 481 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-ML1Q04706 440 aaKnown RBP8.31□□□□□ -1.08
TRS23YDR246W TY1A-BRQ12217 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-NL2Q12470 440 aa8.31□□□□□ -1.08
TRS23YDR246W TY1A-GR2Q12485 440 aa8.31□□□□□ -1.08
TRS23YDR246W KIN1P13185 1064 aa8.29□□□□□ -1.08
TRS23YDR246W SIT4P20604 311 aa8.29□□□□□ -1.08
TRS23YDR246W FPK1P53739 893 aa8.29□□□□□ -1.08
TRS23YDR246W ERF2Q06551 359 aa8.29□□□□□ -1.08
TRS23YDR246W TCB3Q03640 1545 aaKnown RBP8.29□□□□□ -1.08
TRS23YDR246W RTF1P53064 558 aa8.28□□□□□ -1.08
TRS23YDR246W YNL115CP53925 644 aa8.28□□□□□ -1.08
TRS23YDR246W SEC2P17065 759 aa8.27□□□□□ -1.09
TRS23YDR246W HST2P53686 357 aa8.24□□□□□ -1.09
TRS23YDR246W TY1B-DR4Q07793 1604 aa8.23□□□□□ -1.09
TRS23YDR246W MRF1P30775 413 aaPredicted RBP8.23□□□□□ -1.09
TRS23YDR246W SPT16P32558 1035 aaKnown RBP8.23□□□□□ -1.09
TRS23YDR246W RRN7P40992 514 aa8.23□□□□□ -1.09
TRS23YDR246W PAT1P25644 796 aaKnown RBP8.22□□□□□ -1.09
TRS23YDR246W SLY41P22215 453 aa8.21□□□□□ -1.1
TRS23YDR246W GLN1P32288 370 aaKnown RBP8.21□□□□□ -1.1
TRS23YDR246W MMP1Q12372 583 aa8.21□□□□□ -1.1
TRS23YDR246W DPS1P04802 557 aaKnown RBP8.2□□□□□ -1.1
TRS23YDR246W SCJ1P25303 377 aa8.2□□□□□ -1.1
TRS23YDR246W SDH2P21801 266 aa8.19□□□□□ -1.1
TRS23YDR246W CSN12P47130 423 aa8.19□□□□□ -1.1
TRS23YDR246W TUB4P53378 473 aa8.19□□□□□ -1.1
TRS23YDR246W TYW1Q08960 810 aaKnown RBP8.19□□□□□ -1.1
TRS23YDR246W LEO1P38439 464 aa8.18□□□□□ -1.1
TRS23YDR246W AGE1Q04412 482 aa8.18□□□□□ -1.1
TRS23YDR246W YEL077CQ3E7X8 1277 aa8.18□□□□□ -1.1
TRS23YDR246W ERG12P07277 443 aa8.17□□□□□ -1.1
TRS23YDR246W ESS1P22696 170 aa8.17□□□□□ -1.1
TRS23YDR246W PAC1P39946 494 aaKnown RBP8.16□□□□□ -1.1
TRS23YDR246W KTR1P27810 393 aaKnown RBP8.15□□□□□ -1.1
TRS23YDR246W AMS1P22855 1083 aa8.14□□□□□ -1.11
TRS23YDR246W TBF1Q02457 562 aa8.14□□□□□ -1.11
TRS23YDR246W SSA2P10592 639 aaKnown RBP8.13□□□□□ -1.11
TRS23YDR246W PKH3Q03306 898 aaPredicted RBP8.13□□□□□ -1.11
TRS23YDR246W YJU3P28321 313 aa8.12□□□□□ -1.11
TRS23YDR246W GUA1P38625 525 aaKnown RBP8.12□□□□□ -1.11
TRS23YDR246W PUS6P53294 404 aa8.12□□□□□ -1.11
TRS23YDR246W RAS1P01119 309 aa8.11□□□□□ -1.11
TRS23YDR246W TRM1P15565 570 aaKnown RBP8.11□□□□□ -1.11
TRS23YDR246W HSL1P34244 1518 aa8.08□□□□□ -1.12
TRS23YDR246W CST6P40535 587 aa8.08□□□□□ -1.12
TRS23YDR246W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
TRS23YDR246W KXD1P53158 218 aa8.08□□□□□ -1.12
TRS23YDR246W FRK1Q03002 865 aaPredicted RBP8.08□□□□□ -1.12
TRS23YDR246W LAM6Q08001 693 aa8.08□□□□□ -1.12
TRS23YDR246W YDL206WQ12424 762 aa8.08□□□□□ -1.12
TRS23YDR246W MON2P48563 1636 aaPredicted RBP8.07□□□□□ -1.12
TRS23YDR246W ARG8P18544 423 aa8.06□□□□□ -1.12
TRS23YDR246W BDP1P46678 594 aa8.06□□□□□ -1.12
TRS23YDR246W PDC1P06169 563 aaKnown RBP8.04□□□□□ -1.12
TRS23YDR246W MOD5P07884 428 aa8.04□□□□□ -1.12
TRS23YDR246W RPA14P50106 137 aa8.04□□□□□ -1.12
TRS23YDR246W HPC2Q01448 625 aa8.04□□□□□ -1.12
TRS23YDR246W RAD59Q12223 238 aa8.04□□□□□ -1.12
TRS23YDR246W SPT6P23615 1451 aaKnown RBP8.04□□□□□ -1.12
TRS23YDR246W ALR1Q08269 859 aa8.03□□□□□ -1.12
TRS23YDR246W RSC30P38781 883 aa8.02□□□□□ -1.13
TRS23YDR246W HXT10P43581 546 aa8.01□□□□□ -1.13
TRS23YDR246W BRL1P38770 471 aa8□□□□□ -1.13
TRS23YDR246W RRD1P40454 393 aaKnown RBP8□□□□□ -1.13
TRS23YDR246W YPR097WQ06839 1073 aa8□□□□□ -1.13
TRS23YDR246W TPD3P31383 635 aa7.99□□□□□ -1.13
TRS23YDR246W TFB3Q03290 321 aa7.98□□□□□ -1.13
TRS23YDR246W PUS5Q06244 254 aa7.98□□□□□ -1.13
TRS23YDR246W SWR1Q05471 1514 aa7.98□□□□□ -1.13
TRS23YDR246W CLA4P48562 842 aa7.95□□□□□ -1.14
TRS23YDR246W HIR3P47171 1648 aa7.95□□□□□ -1.14
TRS23YDR246W SRC1Q03707 834 aa7.94□□□□□ -1.14
TRS23YDR246W HGH1P48362 394 aaKnown RBP7.93□□□□□ -1.14
TRS23YDR246W AIR1P40507 360 aaKnown RBP7.92□□□□□ -1.14
TRS23YDR246W HED1Q03937 162 aa7.92□□□□□ -1.14
TRS23YDR246W PKC1P24583 1151 aa7.91□□□□□ -1.14
TRS23YDR246W YBL036CP38197 257 aa7.91□□□□□ -1.14
TRS23YDR246W MAK16P10962 306 aaPredicted RBP7.9□□□□□ -1.14
TRS23YDR246W TRK1P12685 1235 aa7.9□□□□□ -1.14
TRS23YDR246W KIP2P28743 706 aa7.9□□□□□ -1.14
TRS23YDR246W SYH1Q02875 849 aaKnown RBP7.9□□□□□ -1.14
TRS23YDR246W XRN1P22147 1528 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms