RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C SIT4P20604 311 aa8.26□□□□□ -1.09
MSS116YDR194C SEC20P28791 383 aa8.26□□□□□ -1.09
MSS116YDR194C MAK16P10962 306 aaPredicted RBP8.25□□□□□ -1.09
MSS116YDR194C RSC30P38781 883 aa8.25□□□□□ -1.09
MSS116YDR194C YPR109WQ06104 294 aa8.25□□□□□ -1.09
MSS116YDR194C RRP15Q06511 250 aaPredicted RBP8.25□□□□□ -1.09
MSS116YDR194C GYP5Q12344 894 aa8.24□□□□□ -1.09
MSS116YDR194C ERP5P38819 212 aa8.24□□□□□ -1.09
MSS116YDR194C BRN1P38170 754 aa8.23□□□□□ -1.09
MSS116YDR194C MSC6Q08818 692 aaKnown RBP8.23□□□□□ -1.09
MSS116YDR194C ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
MSS116YDR194C CSC1Q06538 782 aa8.22□□□□□ -1.09
MSS116YDR194C ECM23Q02710 187 aa8.22□□□□□ -1.09
MSS116YDR194C RDS2P19541 446 aaKnown RBP8.21□□□□□ -1.09
MSS116YDR194C DOS2P54858 310 aa8.2□□□□□ -1.1
MSS116YDR194C ATE1P16639 503 aa8.19□□□□□ -1.1
MSS116YDR194C SPC42P36094 363 aa8.19□□□□□ -1.1
MSS116YDR194C TRL1P09880 827 aaKnown RBP8.18□□□□□ -1.1
MSS116YDR194C MPH3P0CE00 602 aa8.18□□□□□ -1.1
MSS116YDR194C AI4P03878 556 aa8.17□□□□□ -1.1
MSS116YDR194C KTR7P40504 517 aa8.17□□□□□ -1.1
MSS116YDR194C TPS3P38426 1054 aaKnown RBP8.17□□□□□ -1.1
MSS116YDR194C YHL050CP38721 697 aa8.17□□□□□ -1.1
MSS116YDR194C YHR219WP38900 624 aa8.17□□□□□ -1.1
MSS116YDR194C YPP1P46951 817 aa8.17□□□□□ -1.1
MSS116YDR194C POL32P47110 350 aa8.17□□□□□ -1.1
MSS116YDR194C LAM6Q08001 693 aa8.17□□□□□ -1.1
MSS116YDR194C YEL077CQ3E7X8 1277 aa8.17□□□□□ -1.1
MSS116YDR194C DCW1P36091 449 aa8.15□□□□□ -1.1
MSS116YDR194C SLI15P38283 698 aa8.15□□□□□ -1.11
MSS116YDR194C UBX7P38349 436 aa8.15□□□□□ -1.11
MSS116YDR194C MDJ2P42834 146 aa8.15□□□□□ -1.11
MSS116YDR194C KAR5Q04746 504 aa8.15□□□□□ -1.11
MSS116YDR194C GAL2P13181 574 aa8.14□□□□□ -1.11
MSS116YDR194C SLY41P22215 453 aa8.14□□□□□ -1.11
MSS116YDR194C ALD4P46367 519 aaKnown RBP8.14□□□□□ -1.11
MSS116YDR194C NAF1P53919 492 aaKnown RBP8.14□□□□□ -1.11
MSS116YDR194C SVF1Q05515 481 aa8.14□□□□□ -1.11
MSS116YDR194C TFB4Q12004 338 aa8.14□□□□□ -1.11
MSS116YDR194C WHI5Q12416 295 aa8.14□□□□□ -1.11
MSS116YDR194C YGL015CP33199 130 aa8.13□□□□□ -1.11
MSS116YDR194C NNF1P47149 201 aa8.13□□□□□ -1.11
MSS116YDR194C FAR11P53917 953 aa8.13□□□□□ -1.11
MSS116YDR194C CWC15Q03772 175 aaKnown RBP8.13□□□□□ -1.11
MSS116YDR194C FPR4Q06205 392 aaPredicted RBP8.13□□□□□ -1.11
MSS116YDR194C MCM16Q12262 181 aa8.13□□□□□ -1.11
MSS116YDR194C RPP1BP10622 106 aaKnown RBP8.11□□□□□ -1.11
MSS116YDR194C PPX1P38698 397 aa8.11□□□□□ -1.11
MSS116YDR194C GRS1P38088 690 aaKnown RBP8.11□□□□□ -1.11
MSS116YDR194C CDC73Q06697 393 aa8.11□□□□□ -1.11
MSS116YDR194C TOP1P04786 769 aa8.1□□□□□ -1.11
MSS116YDR194C STB3Q12427 513 aa8.1□□□□□ -1.11
MSS116YDR194C CST6P40535 587 aa8.09□□□□□ -1.11
MSS116YDR194C OYE2Q03558 400 aaKnown RBP8.09□□□□□ -1.11
MSS116YDR194C TUM1Q08686 304 aaKnown RBP8.09□□□□□ -1.11
MSS116YDR194C TRM1P15565 570 aaKnown RBP8.08□□□□□ -1.12
MSS116YDR194C SEC8P32855 1065 aa8.08□□□□□ -1.12
MSS116YDR194C TIF4632P39936 914 aaKnown RBP8.08□□□□□ -1.12
MSS116YDR194C YAF9P53930 226 aa8.08□□□□□ -1.12
MSS116YDR194C ISF1P32488 338 aa8.07□□□□□ -1.12
MSS116YDR194C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
MSS116YDR194C YNL115CP53925 644 aa8.07□□□□□ -1.12
MSS116YDR194C HTA1P04911 132 aaKnown RBP8.06□□□□□ -1.12
MSS116YDR194C HTA2P04912 132 aa8.06□□□□□ -1.12
MSS116YDR194C NMD2P38798 1089 aaKnown RBP8.06□□□□□ -1.12
MSS116YDR194C DAN4P47179 1161 aa8.06□□□□□ -1.12
MSS116YDR194C MAG2Q06436 670 aaKnown RBP8.06□□□□□ -1.12
MSS116YDR194C RTF1P53064 558 aa8.06□□□□□ -1.12
MSS116YDR194C THI12P42883 340 aa8.05□□□□□ -1.12
MSS116YDR194C THI5P43534 340 aa8.05□□□□□ -1.12
MSS116YDR194C THI11P47183 340 aa8.05□□□□□ -1.12
MSS116YDR194C PEX21P50091 288 aa8.05□□□□□ -1.12
MSS116YDR194C ATG1P53104 897 aa8.05□□□□□ -1.12
MSS116YDR194C PUF6Q04373 656 aaKnown RBP8.05□□□□□ -1.12
MSS116YDR194C THI13Q07748 340 aa8.05□□□□□ -1.12
MSS116YDR194C YOL036WQ08206 761 aa8.05□□□□□ -1.12
MSS116YDR194C ENV9Q08651 330 aa8.05□□□□□ -1.12
MSS116YDR194C BOL3P39724 118 aa8.04□□□□□ -1.12
MSS116YDR194C TGL3P40308 642 aa8.04□□□□□ -1.12
MSS116YDR194C YJR107WP47145 328 aa8.04□□□□□ -1.12
MSS116YDR194C JIP5Q06214 492 aaPredicted RBP8.04□□□□□ -1.12
MSS116YDR194C EMP47P43555 445 aa8.03□□□□□ -1.12
MSS116YDR194C PNP1Q05788 311 aa8.03□□□□□ -1.12
MSS116YDR194C PUS6P53294 404 aa8.02□□□□□ -1.12
MSS116YDR194C PHO87P25360 923 aa8.01□□□□□ -1.13
MSS116YDR194C SET4P42948 560 aa8.01□□□□□ -1.13
MSS116YDR194C NUT2Q06213 157 aa8.01□□□□□ -1.13
MSS116YDR194C YOL098CQ12496 1037 aa8.01□□□□□ -1.13
MSS116YDR194C ATG36P46983 293 aa8.01□□□□□ -1.13
MSS116YDR194C FRT1Q99332 602 aa8.01□□□□□ -1.13
MSS116YDR194C ROM1P53046 1155 aa8□□□□□ -1.13
MSS116YDR194C RNH70P53331 553 aa8□□□□□ -1.13
MSS116YDR194C MET1P36150 593 aa7.99□□□□□ -1.13
MSS116YDR194C ACS2P52910 683 aaKnown RBP7.99□□□□□ -1.13
MSS116YDR194C MET4P32389 672 aa7.99□□□□□ -1.13
MSS116YDR194C MGE1P38523 228 aa7.99□□□□□ -1.13
MSS116YDR194C YRR1Q12172 810 aa7.98□□□□□ -1.13
MSS116YDR194C MST1P07236 462 aa7.97□□□□□ -1.13
MSS116YDR194C HAP4P14064 554 aa7.97□□□□□ -1.13
MSS116YDR194C YEL023CP39992 682 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms