RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAN1YDR143C YNR029CP53729 429 aaKnown RBP11.03□□□□□ -0.64
SAN1YDR143C PPH3P32345 308 aa11.01□□□□□ -0.65
SAN1YDR143C MIF2P35201 549 aa11.01□□□□□ -0.65
SAN1YDR143C TY1B-NL2Q99337 1749 aaKnown RBP11□□□□□ -0.65
SAN1YDR143C FKH1P40466 484 aa10.99□□□□□ -0.65
SAN1YDR143C YML133CQ03099 1374 aa10.97□□□□□ -0.65
SAN1YDR143C YLL067CQ07888 1374 aa10.97□□□□□ -0.65
SAN1YDR143C YLL066CQ99208 1374 aa10.97□□□□□ -0.65
SAN1YDR143C MLP1Q02455 1875 aaKnown RBP10.96□□□□□ -0.66
SAN1YDR143C PSK1P31374 1356 aa10.95□□□□□ -0.66
SAN1YDR143C CPS1P27614 576 aa10.94□□□□□ -0.66
SAN1YDR143C THI12P42883 340 aa10.94□□□□□ -0.66
SAN1YDR143C THI5P43534 340 aa10.94□□□□□ -0.66
SAN1YDR143C THI11P47183 340 aa10.94□□□□□ -0.66
SAN1YDR143C YMR196WQ04336 1088 aa10.94□□□□□ -0.66
SAN1YDR143C THI13Q07748 340 aa10.94□□□□□ -0.66
SAN1YDR143C YEF3P16521 1044 aaKnown RBP10.88□□□□□ -0.67
SAN1YDR143C TRK1P12685 1235 aa10.88□□□□□ -0.67
SAN1YDR143C LEU2P04173 364 aaPredicted RBP10.86□□□□□ -0.67
SAN1YDR143C PRS1P32895 427 aaKnown RBP10.84□□□□□ -0.67
SAN1YDR143C MTR4P47047 1073 aaKnown RBP10.83□□□□□ -0.68
SAN1YDR143C CSE4P36012 229 aa10.82□□□□□ -0.68
SAN1YDR143C RPS24AP0CX31 135 aaKnown RBP10.81□□□□□ -0.68
SAN1YDR143C RPS24BP0CX32 135 aaKnown RBP10.81□□□□□ -0.68
SAN1YDR143C HIM1Q06674 414 aa10.8□□□□□ -0.68
SAN1YDR143C PDI1P17967 522 aaKnown RBP10.79□□□□□ -0.68
SAN1YDR143C ADE6P38972 1358 aaKnown RBP10.79□□□□□ -0.68
SAN1YDR143C KAR2P16474 682 aaKnown RBP10.78□□□□□ -0.68
SAN1YDR143C AUS1Q08409 1394 aa10.77□□□□□ -0.68
SAN1YDR143C RTF1P53064 558 aa10.77□□□□□ -0.68
SAN1YDR143C TAP42Q04372 366 aa10.77□□□□□ -0.68
SAN1YDR143C GAS4Q08271 471 aa10.77□□□□□ -0.69
SAN1YDR143C PRP43P53131 767 aaKnown RBP10.75□□□□□ -0.69
SAN1YDR143C TY4B-HP0C2J7 1802 aa10.75□□□□□ -0.69
SAN1YDR143C TY4B-JP47024 1803 aa10.75□□□□□ -0.69
SAN1YDR143C YFR006WP43590 535 aa10.74□□□□□ -0.69
SAN1YDR143C RRP46P53256 223 aaPredicted RBP10.74□□□□□ -0.69
SAN1YDR143C PAP2P53632 584 aaKnown RBP10.74□□□□□ -0.69
SAN1YDR143C DPS1P04802 557 aaKnown RBP10.73□□□□□ -0.69
SAN1YDR143C YDL144CQ07589 356 aa10.73□□□□□ -0.69
SAN1YDR143C GRX4P32642 244 aa10.72□□□□□ -0.69
SAN1YDR143C SNF2P22082 1703 aa10.71□□□□□ -0.69
SAN1YDR143C MPP10P47083 593 aaKnown RBP10.71□□□□□ -0.69
SAN1YDR143C RTR1P40084 226 aaPredicted RBP10.7□□□□□ -0.7
SAN1YDR143C PTP3P40048 928 aa10.69□□□□□ -0.7
SAN1YDR143C IOC4Q04213 475 aa10.69□□□□□ -0.7
SAN1YDR143C PRP45P28004 379 aaPredicted RBP10.68□□□□□ -0.7
SAN1YDR143C VPS27P40343 622 aaKnown RBP10.68□□□□□ -0.7
SAN1YDR143C RPP0P05317 312 aaKnown RBP10.67□□□□□ -0.7
SAN1YDR143C PRP5P21372 849 aaPredicted RBP10.67□□□□□ -0.7
SAN1YDR143C FUN12P39730 1002 aaKnown RBP10.67□□□□□ -0.7
SAN1YDR143C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
SAN1YDR143C CDC45Q08032 650 aa10.66□□□□□ -0.7
SAN1YDR143C RVB2Q12464 471 aaKnown RBP10.65□□□□□ -0.71
SAN1YDR143C YIL177CP40434 1758 aa10.64□□□□□ -0.71
SAN1YDR143C YJL225CP40889 1758 aa10.64□□□□□ -0.71
SAN1YDR143C RPO41P13433 1351 aaKnown RBP10.64□□□□□ -0.71
SAN1YDR143C SUI2P20459 304 aaKnown RBP10.64□□□□□ -0.71
SAN1YDR143C MSB3P48566 633 aaPredicted RBP10.63□□□□□ -0.71
SAN1YDR143C RRP5Q05022 1729 aaKnown RBP10.63□□□□□ -0.71
SAN1YDR143C PRD1P25375 712 aa10.62□□□□□ -0.71
SAN1YDR143C NOP2P40991 618 aaKnown RBP10.62□□□□□ -0.71
SAN1YDR143C YRF1-2P40105 1681 aa10.61□□□□□ -0.71
SAN1YDR143C THI22Q06490 572 aa10.61□□□□□ -0.71
SAN1YDR143C SAP155P43612 1002 aa10.61□□□□□ -0.71
SAN1YDR143C SLM3Q12093 417 aa10.61□□□□□ -0.71
SAN1YDR143C TPD3P31383 635 aa10.59□□□□□ -0.71
SAN1YDR143C AKL1P38080 1108 aaKnown RBP10.58□□□□□ -0.72
SAN1YDR143C REB1P21538 810 aa10.58□□□□□ -0.72
SAN1YDR143C URB1P34241 1764 aaKnown RBP10.56□□□□□ -0.72
SAN1YDR143C DSD1P53095 428 aa10.56□□□□□ -0.72
SAN1YDR143C RTT109Q07794 436 aa10.56□□□□□ -0.72
SAN1YDR143C ENT1Q12518 454 aa10.56□□□□□ -0.72
SAN1YDR143C TCB1Q12466 1186 aa10.56□□□□□ -0.72
SAN1YDR143C YRF1-4O13559 1382 aa10.55□□□□□ -0.72
SAN1YDR143C XKS1P42826 600 aa10.55□□□□□ -0.72
SAN1YDR143C APP1P53933 587 aa10.55□□□□□ -0.72
SAN1YDR143C FKS3Q04952 1785 aa10.55□□□□□ -0.72
SAN1YDR143C APC1P53886 1748 aa10.54□□□□□ -0.72
SAN1YDR143C HEF3P53978 1044 aaKnown RBP10.54□□□□□ -0.72
SAN1YDR143C HSP104P31539 908 aaKnown RBP10.52□□□□□ -0.73
SAN1YDR143C PRY3P47033 881 aa10.52□□□□□ -0.73
SAN1YDR143C ENV9Q08651 330 aa10.51□□□□□ -0.73
SAN1YDR143C NTH2P35172 780 aa10.5□□□□□ -0.73
SAN1YDR143C RCR1P38212 213 aa10.5□□□□□ -0.73
SAN1YDR143C YRB30P53107 440 aaPredicted RBP10.49□□□□□ -0.73
SAN1YDR143C RSF2P46974 1380 aa10.49□□□□□ -0.73
SAN1YDR143C NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SAN1YDR143C YAH1Q12184 172 aaKnown RBP10.48□□□□□ -0.73
SAN1YDR143C YNL050CP53952 270 aa10.47□□□□□ -0.73
SAN1YDR143C DAL5P15365 543 aa10.46□□□□□ -0.74
SAN1YDR143C YBR287WP38355 427 aa10.46□□□□□ -0.74
SAN1YDR143C IES2P40154 320 aa10.46□□□□□ -0.74
SAN1YDR143C RRT14P40470 206 aa10.46□□□□□ -0.74
SAN1YDR143C AOS1Q06624 347 aa10.46□□□□□ -0.74
SAN1YDR143C ZDS1P50111 915 aaKnown RBP10.44□□□□□ -0.74
SAN1YDR143C SIR4P11978 1358 aa10.44□□□□□ -0.74
SAN1YDR143C YIL092WP40497 633 aa10.44□□□□□ -0.74
SAN1YDR143C GYP7P48365 746 aa10.44□□□□□ -0.74
SAN1YDR143C RAD2P07276 1031 aa10.43□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms