RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C YNL115CP53925 644 aa7.24□□□□□ -1.25
TRM1YDR120C HAP5Q02516 242 aa7.24□□□□□ -1.25
TRM1YDR120C SLY41P22215 453 aa7.24□□□□□ -1.25
TRM1YDR120C ATG32P40458 529 aa7.24□□□□□ -1.25
TRM1YDR120C PDR1P12383 1068 aa7.23□□□□□ -1.25
TRM1YDR120C SAP30P38429 201 aa7.23□□□□□ -1.25
TRM1YDR120C ARH1P48360 493 aa7.23□□□□□ -1.25
TRM1YDR120C YDR344CQ05510 147 aa7.22□□□□□ -1.25
TRM1YDR120C ARG8P18544 423 aa7.21□□□□□ -1.25
TRM1YDR120C CSE4P36012 229 aa7.21□□□□□ -1.25
TRM1YDR120C RSC30P38781 883 aa7.21□□□□□ -1.25
TRM1YDR120C KEX2P13134 814 aa7.21□□□□□ -1.26
TRM1YDR120C BIO2P32451 375 aa7.21□□□□□ -1.26
TRM1YDR120C AIR2Q12476 344 aaKnown RBP7.21□□□□□ -1.26
TRM1YDR120C TIF1P10081 395 aaKnown RBP7.19□□□□□ -1.26
TRM1YDR120C ERF2Q06551 359 aa7.19□□□□□ -1.26
TRM1YDR120C LAM6Q08001 693 aa7.19□□□□□ -1.26
TRM1YDR120C STR2P47164 639 aa7.18□□□□□ -1.26
TRM1YDR120C NPL4P33755 580 aa7.18□□□□□ -1.26
TRM1YDR120C ISM1P48526 1002 aa7.18□□□□□ -1.26
TRM1YDR120C BNI4P53858 892 aa7.18□□□□□ -1.26
TRM1YDR120C RPL34BP40525 121 aaKnown RBP7.17□□□□□ -1.26
TRM1YDR120C TRM1P15565 570 aaKnown RBP7.16□□□□□ -1.26
TRM1YDR120C RAM1P22007 431 aa7.16□□□□□ -1.26
TRM1YDR120C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
TRM1YDR120C PUS6P53294 404 aa7.15□□□□□ -1.26
TRM1YDR120C ELP4Q02884 456 aaKnown RBP7.15□□□□□ -1.26
TRM1YDR120C ERG12P07277 443 aa7.15□□□□□ -1.27
TRM1YDR120C YNL108CP53929 270 aa7.15□□□□□ -1.27
TRM1YDR120C MAK16P10962 306 aaPredicted RBP7.14□□□□□ -1.27
TRM1YDR120C SUP45P12385 437 aaKnown RBP7.13□□□□□ -1.27
TRM1YDR120C SPT23P35210 1082 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-DR4O74302 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-HP0C2I4 478 aaKnown RBP7.13□□□□□ -1.27
TRM1YDR120C TY1A-AP0CX57 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-PR1P0CX58 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-ORP0CX59 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-PR2P0CX60 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-DR5P0CX65 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-ER2P0CX66 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-GR3P0CX67 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-LR1P0CX68 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-MR2P0CX69 440 aa7.13□□□□□ -1.27
TRM1YDR120C SEC2P17065 759 aa7.13□□□□□ -1.27
TRM1YDR120C SPT5P27692 1063 aaKnown RBP7.13□□□□□ -1.27
TRM1YDR120C TY1A-JR2P47099 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-DR1Q03856 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-ML1Q04706 440 aaKnown RBP7.13□□□□□ -1.27
TRM1YDR120C TY1A-BRQ12217 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-NL2Q12470 440 aa7.13□□□□□ -1.27
TRM1YDR120C TY1A-GR2Q12485 440 aa7.13□□□□□ -1.27
TRM1YDR120C GCD11P32481 527 aaKnown RBP7.12□□□□□ -1.27
TRM1YDR120C RTG2P32608 588 aaKnown RBP7.12□□□□□ -1.27
TRM1YDR120C AGE1Q04412 482 aa7.12□□□□□ -1.27
TRM1YDR120C BUD20Q08004 166 aaPredicted RBP7.12□□□□□ -1.27
TRM1YDR120C YDJ1P25491 409 aaKnown RBP7.1□□□□□ -1.27
TRM1YDR120C PTC2P39966 464 aaKnown RBP7.1□□□□□ -1.27
TRM1YDR120C TBF1Q02457 562 aa7.1□□□□□ -1.27
TRM1YDR120C YPR204WQ08995 1032 aa7.1□□□□□ -1.27
TRM1YDR120C YPR015CQ12531 247 aa7.1□□□□□ -1.27
TRM1YDR120C TUB4P53378 473 aa7.1□□□□□ -1.27
TRM1YDR120C SUB2Q07478 446 aaKnown RBP7.1□□□□□ -1.27
TRM1YDR120C BMT6Q12291 365 aa7.1□□□□□ -1.27
TRM1YDR120C ENO2P00925 437 aaKnown RBP7.08□□□□□ -1.28
TRM1YDR120C PRE3P38624 215 aa7.08□□□□□ -1.28
TRM1YDR120C NAF1P53919 492 aaKnown RBP7.07□□□□□ -1.28
TRM1YDR120C YML082WQ04533 649 aaKnown RBP7.07□□□□□ -1.28
TRM1YDR120C YDL206WQ12424 762 aa7.07□□□□□ -1.28
TRM1YDR120C SSA4P22202 642 aaKnown RBP7.07□□□□□ -1.28
TRM1YDR120C TTI1P36097 1038 aa7.07□□□□□ -1.28
TRM1YDR120C PRT1P06103 763 aaKnown RBP7.05□□□□□ -1.28
TRM1YDR120C SIS1P25294 352 aaKnown RBP7.05□□□□□ -1.28
TRM1YDR120C YJL171CP46992 396 aa7.05□□□□□ -1.28
TRM1YDR120C RIM21P48565 533 aa7.05□□□□□ -1.28
TRM1YDR120C ENO1P00924 437 aaKnown RBP7.04□□□□□ -1.28
TRM1YDR120C CPS1P27614 576 aa7.04□□□□□ -1.28
TRM1YDR120C RPA14P50106 137 aa7.04□□□□□ -1.28
TRM1YDR120C MRX10Q05648 414 aa7.04□□□□□ -1.28
TRM1YDR120C SSA1P10591 642 aaKnown RBP7.04□□□□□ -1.28
TRM1YDR120C CHL1P22516 861 aaPredicted RBP7.04□□□□□ -1.28
TRM1YDR120C PAC1P39946 494 aaKnown RBP7.03□□□□□ -1.28
TRM1YDR120C YPR097WQ06839 1073 aa7.02□□□□□ -1.29
TRM1YDR120C RRN7P40992 514 aa7.01□□□□□ -1.29
TRM1YDR120C YPP1P46951 817 aa7.01□□□□□ -1.29
TRM1YDR120C ALR1Q08269 859 aa7.01□□□□□ -1.29
TRM1YDR120C MCM16Q12262 181 aa7.01□□□□□ -1.29
TRM1YDR120C PDC1P06169 563 aaKnown RBP7□□□□□ -1.29
TRM1YDR120C SIS2P36024 562 aa7□□□□□ -1.29
TRM1YDR120C PAT1P25644 796 aaKnown RBP6.99□□□□□ -1.29
TRM1YDR120C GEF1P37020 779 aa6.99□□□□□ -1.29
TRM1YDR120C KXD1P53158 218 aa6.98□□□□□ -1.29
TRM1YDR120C RDS2P19541 446 aaKnown RBP6.97□□□□□ -1.29
TRM1YDR120C SPT16P32558 1035 aaKnown RBP6.97□□□□□ -1.29
TRM1YDR120C FIG4P42837 879 aa6.97□□□□□ -1.29
TRM1YDR120C NOB1Q08444 459 aaKnown RBP6.97□□□□□ -1.29
TRM1YDR120C TEC1P18412 486 aa6.96□□□□□ -1.29
TRM1YDR120C ISF1P32488 338 aa6.96□□□□□ -1.3
TRM1YDR120C PEP12P32854 288 aa6.96□□□□□ -1.3
TRM1YDR120C EMP47P43555 445 aa6.96□□□□□ -1.3
TRM1YDR120C HXT10P43581 546 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms