RNA–Protein interactions for RNA: YDL210W

UGA4, Transcript of GABA (gamma-aminobutyrate) permease, yeastyeast

Gene UGA4, Length 1,716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UGA4YDL210W RCM1P53972 490 aa12.65□□□□□ -0.38
UGA4YDL210W PPH3P32345 308 aa12.64□□□□□ -0.39
UGA4YDL210W EBP2P36049 427 aaKnown RBP12.64□□□□□ -0.39
UGA4YDL210W CAB3P36076 571 aa12.62□□□□□ -0.39
UGA4YDL210W YML133CQ03099 1374 aa12.6□□□□□ -0.39
UGA4YDL210W YLL067CQ07888 1374 aa12.6□□□□□ -0.39
UGA4YDL210W YLL066CQ99208 1374 aa12.6□□□□□ -0.39
UGA4YDL210W PSK1P31374 1356 aa12.6□□□□□ -0.39
UGA4YDL210W CPS1P27614 576 aa12.59□□□□□ -0.39
UGA4YDL210W CHZ1P40019 153 aaPredicted RBP12.59□□□□□ -0.39
UGA4YDL210W YIL177CP40434 1758 aa12.54□□□□□ -0.4
UGA4YDL210W YJL225CP40889 1758 aa12.54□□□□□ -0.4
UGA4YDL210W RRP5Q05022 1729 aaKnown RBP12.54□□□□□ -0.4
UGA4YDL210W PDS5Q04264 1277 aa12.54□□□□□ -0.4
UGA4YDL210W RTG3P38165 486 aa12.51□□□□□ -0.41
UGA4YDL210W FKH1P40466 484 aa12.51□□□□□ -0.41
UGA4YDL210W NST1P53935 1240 aa12.48□□□□□ -0.41
UGA4YDL210W ADE6P38972 1358 aaKnown RBP12.48□□□□□ -0.41
UGA4YDL210W SPT7P35177 1332 aa12.48□□□□□ -0.41
UGA4YDL210W PTP3P40048 928 aa12.46□□□□□ -0.41
UGA4YDL210W PSD2P53037 1138 aaKnown RBP12.46□□□□□ -0.41
UGA4YDL210W SCT1P32784 759 aa12.45□□□□□ -0.42
UGA4YDL210W YRF1-2P40105 1681 aa12.43□□□□□ -0.42
UGA4YDL210W SEC3P33332 1336 aaKnown RBP12.42□□□□□ -0.42
UGA4YDL210W LEU2P04173 364 aaPredicted RBP12.41□□□□□ -0.42
UGA4YDL210W URB1P34241 1764 aaKnown RBP12.4□□□□□ -0.42
UGA4YDL210W LEU3P08638 886 aa12.39□□□□□ -0.43
UGA4YDL210W MTR4P47047 1073 aaKnown RBP12.39□□□□□ -0.43
UGA4YDL210W FKS3Q04952 1785 aa12.38□□□□□ -0.43
UGA4YDL210W SIS2P36024 562 aa12.38□□□□□ -0.43
UGA4YDL210W PRP43P53131 767 aaKnown RBP12.37□□□□□ -0.43
UGA4YDL210W RPS24AP0CX31 135 aaKnown RBP12.37□□□□□ -0.43
UGA4YDL210W RPS24BP0CX32 135 aaKnown RBP12.37□□□□□ -0.43
UGA4YDL210W YEF3P16521 1044 aaKnown RBP12.36□□□□□ -0.43
UGA4YDL210W CSE4P36012 229 aa12.36□□□□□ -0.43
UGA4YDL210W NSR1P27476 414 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
UGA4YDL210W AUS1Q08409 1394 aa12.35□□□□□ -0.43
UGA4YDL210W TRK1P12685 1235 aa12.31□□□□□ -0.44
UGA4YDL210W REB1P21538 810 aa12.31□□□□□ -0.44
UGA4YDL210W PRP45P28004 379 aaPredicted RBP12.31□□□□□ -0.44
UGA4YDL210W APP1P53933 587 aa12.31□□□□□ -0.44
UGA4YDL210W SNF2P22082 1703 aa12.3□□□□□ -0.44
UGA4YDL210W APC1P53886 1748 aa12.3□□□□□ -0.44
UGA4YDL210W PDI1P17967 522 aaKnown RBP12.3□□□□□ -0.44
UGA4YDL210W HIM1Q06674 414 aa12.29□□□□□ -0.44
UGA4YDL210W YRF1-3P0CX14 1859 aa12.29□□□□□ -0.44
UGA4YDL210W YRF1-7P0CX15 1859 aa12.29□□□□□ -0.44
UGA4YDL210W YRF1-6P53819 1859 aa12.29□□□□□ -0.44
UGA4YDL210W PRP5P21372 849 aaPredicted RBP12.28□□□□□ -0.44
UGA4YDL210W TAP42Q04372 366 aa12.28□□□□□ -0.44
UGA4YDL210W MSB3P48566 633 aaPredicted RBP12.27□□□□□ -0.45
UGA4YDL210W YAH1Q12184 172 aaKnown RBP12.27□□□□□ -0.45
UGA4YDL210W GAS4Q08271 471 aa12.26□□□□□ -0.45
UGA4YDL210W ENT1Q12518 454 aa12.26□□□□□ -0.45
UGA4YDL210W RTF1P53064 558 aa12.24□□□□□ -0.45
UGA4YDL210W DPS1P04802 557 aaKnown RBP12.23□□□□□ -0.45
UGA4YDL210W SLM3Q12093 417 aa12.22□□□□□ -0.45
UGA4YDL210W KAR2P16474 682 aaKnown RBP12.21□□□□□ -0.45
UGA4YDL210W ENV9Q08651 330 aa12.21□□□□□ -0.45
UGA4YDL210W GRX4P32642 244 aa12.2□□□□□ -0.46
UGA4YDL210W ENP1P38333 483 aaKnown RBP12.2□□□□□ -0.46
UGA4YDL210W RRP46P53256 223 aaPredicted RBP12.18□□□□□ -0.46
UGA4YDL210W RPO41P13433 1351 aaKnown RBP12.15□□□□□ -0.46
UGA4YDL210W RSF2P46974 1380 aa12.15□□□□□ -0.46
UGA4YDL210W TCB1Q12466 1186 aa12.15□□□□□ -0.46
UGA4YDL210W XKS1P42826 600 aa12.12□□□□□ -0.47
UGA4YDL210W PAP2P53632 584 aaKnown RBP12.11□□□□□ -0.47
UGA4YDL210W IMH1Q06704 911 aaKnown RBP12.11□□□□□ -0.47
UGA4YDL210W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
UGA4YDL210W YRF1-4O13559 1382 aa12.09□□□□□ -0.47
UGA4YDL210W IES2P40154 320 aa12.08□□□□□ -0.47
UGA4YDL210W IOC4Q04213 475 aa12.08□□□□□ -0.47
UGA4YDL210W YIL055CP40523 627 aaKnown RBP12.08□□□□□ -0.48
UGA4YDL210W RIM15P43565 1770 aa12.06□□□□□ -0.48
UGA4YDL210W SIR4P11978 1358 aa12.06□□□□□ -0.48
UGA4YDL210W RCR1P38212 213 aa12.06□□□□□ -0.48
UGA4YDL210W YPR148CQ06523 435 aa12.06□□□□□ -0.48
UGA4YDL210W RTR1P40084 226 aaPredicted RBP12.05□□□□□ -0.48
UGA4YDL210W MPP10P47083 593 aaKnown RBP12.05□□□□□ -0.48
UGA4YDL210W AKL1P38080 1108 aaKnown RBP12.04□□□□□ -0.48
UGA4YDL210W YDL144CQ07589 356 aa12.04□□□□□ -0.48
UGA4YDL210W PRS1P32895 427 aaKnown RBP12.03□□□□□ -0.48
UGA4YDL210W DSD1P53095 428 aa12.03□□□□□ -0.48
UGA4YDL210W PRD1P25375 712 aa12.01□□□□□ -0.49
UGA4YDL210W THI22Q06490 572 aa12□□□□□ -0.49
UGA4YDL210W DOT5P40553 215 aa11.99□□□□□ -0.49
UGA4YDL210W ROM2P51862 1356 aaKnown RBP11.99□□□□□ -0.49
UGA4YDL210W HSP104P31539 908 aaKnown RBP11.98□□□□□ -0.49
UGA4YDL210W YKL133CP36066 463 aa11.98□□□□□ -0.49
UGA4YDL210W ADE16P54113 591 aaKnown RBP11.97□□□□□ -0.49
UGA4YDL210W FOX2Q02207 900 aaKnown RBP11.97□□□□□ -0.49
UGA4YDL210W INP54Q08227 384 aaKnown RBP11.96□□□□□ -0.49
UGA4YDL210W RPP0P05317 312 aaKnown RBP11.95□□□□□ -0.5
UGA4YDL210W SUI2P20459 304 aaKnown RBP11.95□□□□□ -0.5
UGA4YDL210W NTH2P35172 780 aa11.95□□□□□ -0.5
UGA4YDL210W AVT3P36062 692 aa11.95□□□□□ -0.5
UGA4YDL210W GLN1P32288 370 aaKnown RBP11.94□□□□□ -0.5
UGA4YDL210W FRK1Q03002 865 aaPredicted RBP11.94□□□□□ -0.5
UGA4YDL210W NUP145P49687 1317 aa11.94□□□□□ -0.5
UGA4YDL210W VPS27P40343 622 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms