RNA–Protein interactions for RNA: YDL061C

RPS29B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29B, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29B	YDL061C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RPS29B	YDL061C	JIP4	Q03361	876 aa		5	□□□□□ -1.61
RPS29B	YDL061C	DAN4	P47179	1161 aa		4.99	□□□□□ -1.61
RPS29B	YDL061C	NOB1	Q08444	459 aa	Known RBP	4.99	□□□□□ -1.61
RPS29B	YDL061C	RAD59	Q12223	238 aa		4.99	□□□□□ -1.61
RPS29B	YDL061C	MMP1	Q12372	583 aa		4.99	□□□□□ -1.61
RPS29B	YDL061C	SEC20	P28791	383 aa		4.98	□□□□□ -1.61
RPS29B	YDL061C	RRN6	P32786	894 aa		4.98	□□□□□ -1.61
RPS29B	YDL061C	PAM1	P37304	830 aa	Known RBP	4.98	□□□□□ -1.61
RPS29B	YDL061C	STM1	P39015	273 aa	Known RBP	4.98	□□□□□ -1.61
RPS29B	YDL061C	YPP1	P46951	817 aa		4.98	□□□□□ -1.61
RPS29B	YDL061C	SEN54	Q02825	467 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS29B	YDL061C	PKH3	Q03306	898 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS29B	YDL061C	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
RPS29B	YDL061C	SUP45	P12385	437 aa	Known RBP	4.97	□□□□□ -1.61
RPS29B	YDL061C	RGR1	P19263	1082 aa		4.97	□□□□□ -1.61
RPS29B	YDL061C	YNL108C	P53929	270 aa		4.97	□□□□□ -1.61
RPS29B	YDL061C	SAM3	Q08986	587 aa		4.97	□□□□□ -1.61
RPS29B	YDL061C	FPK1	P53739	893 aa		4.96	□□□□□ -1.62
RPS29B	YDL061C	IOC4	Q04213	475 aa		4.96	□□□□□ -1.62
RPS29B	YDL061C	CSC1	Q06538	782 aa		4.96	□□□□□ -1.62
RPS29B	YDL061C	HAT1	Q12341	374 aa		4.96	□□□□□ -1.62
RPS29B	YDL061C	PUP1	P25043	261 aa		4.95	□□□□□ -1.62
RPS29B	YDL061C	MVP1	P40959	511 aa	Known RBP	4.95	□□□□□ -1.62
RPS29B	YDL061C	NIS1	P53939	407 aa		4.95	□□□□□ -1.62
RPS29B	YDL061C	GYP5	Q12344	894 aa		4.95	□□□□□ -1.62
RPS29B	YDL061C	ITT1	Q04638	464 aa		4.94	□□□□□ -1.62
RPS29B	YDL061C	ARG8	P18544	423 aa		4.93	□□□□□ -1.62
RPS29B	YDL061C	SVF1	Q05515	481 aa		4.93	□□□□□ -1.62
RPS29B	YDL061C	LAM6	Q08001	693 aa		4.93	□□□□□ -1.62
RPS29B	YDL061C	YTA7	P40340	1379 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	ENO1	P00924	437 aa	Known RBP	4.92	□□□□□ -1.62
RPS29B	YDL061C	AI4	P03878	556 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	MAK16	P10962	306 aa	Predicted RBP	4.92	□□□□□ -1.62
RPS29B	YDL061C	ESS1	P22696	170 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	TGL4	P36165	910 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	SOL3	P38858	249 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	MRX10	Q05648	414 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	TFB4	Q12004	338 aa		4.92	□□□□□ -1.62
RPS29B	YDL061C	ENO2	P00925	437 aa	Known RBP	4.91	□□□□□ -1.62
RPS29B	YDL061C	GAP1	P19145	602 aa	Predicted RBP	4.91	□□□□□ -1.62
RPS29B	YDL061C	SIT4	P20604	311 aa		4.91	□□□□□ -1.62
RPS29B	YDL061C	RIM21	P48565	533 aa		4.91	□□□□□ -1.62
RPS29B	YDL061C	NAF1	P53919	492 aa	Known RBP	4.91	□□□□□ -1.62
RPS29B	YDL061C	MPH3	P0CE00	602 aa		4.9	□□□□□ -1.63
RPS29B	YDL061C	YML083C	Q04526	418 aa		4.9	□□□□□ -1.63
RPS29B	YDL061C	YPR109W	Q06104	294 aa		4.9	□□□□□ -1.63
RPS29B	YDL061C	PEX21	P50091	288 aa		4.89	□□□□□ -1.63
RPS29B	YDL061C	FPR4	Q06205	392 aa	Predicted RBP	4.89	□□□□□ -1.63
RPS29B	YDL061C	HTA1	P04911	132 aa	Known RBP	4.88	□□□□□ -1.63
RPS29B	YDL061C	HTA2	P04912	132 aa		4.88	□□□□□ -1.63
RPS29B	YDL061C	PTC4	P38089	393 aa		4.88	□□□□□ -1.63
RPS29B	YDL061C	ELP4	Q02884	456 aa	Known RBP	4.88	□□□□□ -1.63
RPS29B	YDL061C	MSC6	Q08818	692 aa	Known RBP	4.88	□□□□□ -1.63
RPS29B	YDL061C	YBL113C	Q7M4S9	792 aa		4.88	□□□□□ -1.63
RPS29B	YDL061C	SCJ1	P25303	377 aa		4.87	□□□□□ -1.63
RPS29B	YDL061C	YDJ1	P25491	409 aa	Known RBP	4.87	□□□□□ -1.63
RPS29B	YDL061C	YJU3	P28321	313 aa		4.87	□□□□□ -1.63
RPS29B	YDL061C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPS29B	YDL061C	RTF1	P53064	558 aa		4.87	□□□□□ -1.63
RPS29B	YDL061C	DOS2	P54858	310 aa		4.87	□□□□□ -1.63
RPS29B	YDL061C	PEP12	P32854	288 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	DCW1	P36091	449 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	RSC30	P38781	883 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	IPL1	P38991	367 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	YEL023C	P39992	682 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	ATG3	P40344	310 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	NNF1	P47149	201 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	NST1	P53935	1240 aa		4.86	□□□□□ -1.63
RPS29B	YDL061C	SLY41	P22215	453 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	BRN1	P38170	754 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	PPX1	P38698	397 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	OCA5	P38738	679 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	ECM23	Q02710	187 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	SRC1	Q03707	834 aa		4.85	□□□□□ -1.63
RPS29B	YDL061C	PUF6	Q04373	656 aa	Known RBP	4.85	□□□□□ -1.63
RPS29B	YDL061C	GAL2	P13181	574 aa		4.84	□□□□□ -1.63
RPS29B	YDL061C	SLI15	P38283	698 aa		4.84	□□□□□ -1.63
RPS29B	YDL061C	YNL115C	P53925	644 aa		4.84	□□□□□ -1.63
RPS29B	YDL061C	KAR5	Q04746	504 aa		4.84	□□□□□ -1.63
RPS29B	YDL061C	ERP5	P38819	212 aa		4.83	□□□□□ -1.64
RPS29B	YDL061C	YDR344C	Q05510	147 aa		4.83	□□□□□ -1.64
RPS29B	YDL061C	ENV9	Q08651	330 aa		4.83	□□□□□ -1.64
RPS29B	YDL061C	MCM16	Q12262	181 aa		4.83	□□□□□ -1.64
RPS29B	YDL061C	UBX7	P38349	436 aa		4.82	□□□□□ -1.64
RPS29B	YDL061C	POL32	P47110	350 aa		4.82	□□□□□ -1.64
RPS29B	YDL061C	PUS6	P53294	404 aa		4.82	□□□□□ -1.64
RPS29B	YDL061C	MGE1	P38523	228 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	YHL050C	P38721	697 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	NMD2	P38798	1089 aa	Known RBP	4.81	□□□□□ -1.64
RPS29B	YDL061C	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	ATG1	P53104	897 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	TBF1	Q02457	562 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	RRP15	Q06511	250 aa	Predicted RBP	4.81	□□□□□ -1.64
RPS29B	YDL061C	TUM1	Q08686	304 aa	Known RBP	4.81	□□□□□ -1.64
RPS29B	YDL061C	YEL077C	Q3E7X8	1277 aa		4.81	□□□□□ -1.64
RPS29B	YDL061C	TOP1	P04786	769 aa		4.8	□□□□□ -1.64
RPS29B	YDL061C	HAP4	P14064	554 aa		4.8	□□□□□ -1.64
RPS29B	YDL061C	TRM1	P15565	570 aa	Known RBP	4.8	□□□□□ -1.64
RPS29B	YDL061C	PHO87	P25360	923 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms