RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W PRP45P28004 379 aaPredicted RBP8.56□□□□□ -1.04
SIT4YDL047W CPS1P27614 576 aa8.55□□□□□ -1.04
SIT4YDL047W YRF1-2P40105 1681 aa8.54□□□□□ -1.04
SIT4YDL047W TAF5P38129 798 aa8.54□□□□□ -1.04
SIT4YDL047W NOP7P53261 605 aaKnown RBP8.52□□□□□ -1.05
SIT4YDL047W PRP5P21372 849 aaPredicted RBP8.5□□□□□ -1.05
SIT4YDL047W ESL2P36168 1195 aa8.5□□□□□ -1.05
SIT4YDL047W RCM1P53972 490 aa8.5□□□□□ -1.05
SIT4YDL047W TAF8Q03750 510 aa8.5□□□□□ -1.05
SIT4YDL047W LEU3P08638 886 aa8.47□□□□□ -1.05
SIT4YDL047W UBP1P25037 809 aa8.47□□□□□ -1.05
SIT4YDL047W TY4B-HP0C2J7 1802 aa8.46□□□□□ -1.06
SIT4YDL047W TY4B-JP47024 1803 aa8.46□□□□□ -1.06
SIT4YDL047W PPH3P32345 308 aa8.46□□□□□ -1.06
SIT4YDL047W GTT3P39996 337 aa8.44□□□□□ -1.06
SIT4YDL047W DOT5P40553 215 aa8.44□□□□□ -1.06
SIT4YDL047W RPN11P43588 306 aaKnown RBP8.44□□□□□ -1.06
SIT4YDL047W URB1P34241 1764 aaKnown RBP8.43□□□□□ -1.06
SIT4YDL047W MSB3P48566 633 aaPredicted RBP8.43□□□□□ -1.06
SIT4YDL047W ADE6P38972 1358 aaKnown RBP8.43□□□□□ -1.06
SIT4YDL047W YBL086CP38177 466 aa8.42□□□□□ -1.06
SIT4YDL047W IES2P40154 320 aa8.42□□□□□ -1.06
SIT4YDL047W PSK1P31374 1356 aa8.4□□□□□ -1.06
SIT4YDL047W EDE1P34216 1381 aa8.4□□□□□ -1.06
SIT4YDL047W UGA2P38067 497 aa8.4□□□□□ -1.06
SIT4YDL047W RRD1P40454 393 aaKnown RBP8.4□□□□□ -1.06
SIT4YDL047W YEF3P16521 1044 aaKnown RBP8.39□□□□□ -1.07
SIT4YDL047W TCB1Q12466 1186 aa8.39□□□□□ -1.07
SIT4YDL047W ROM2P51862 1356 aaKnown RBP8.38□□□□□ -1.07
SIT4YDL047W NPR2P39923 615 aa8.38□□□□□ -1.07
SIT4YDL047W YRF1-3P0CX14 1859 aa8.38□□□□□ -1.07
SIT4YDL047W YRF1-7P0CX15 1859 aa8.38□□□□□ -1.07
SIT4YDL047W YRF1-6P53819 1859 aa8.38□□□□□ -1.07
SIT4YDL047W FOX2Q02207 900 aaKnown RBP8.37□□□□□ -1.07
SIT4YDL047W RSF2P46974 1380 aa8.36□□□□□ -1.07
SIT4YDL047W SSA1P10591 642 aaKnown RBP8.36□□□□□ -1.07
SIT4YDL047W TFA1P36100 482 aa8.36□□□□□ -1.07
SIT4YDL047W YJL181WP46987 611 aa8.36□□□□□ -1.07
SIT4YDL047W ALD2P47771 506 aa8.36□□□□□ -1.07
SIT4YDL047W LYS4P49367 693 aaPredicted RBP8.36□□□□□ -1.07
SIT4YDL047W PRP43P53131 767 aaKnown RBP8.36□□□□□ -1.07
SIT4YDL047W SLM3Q12093 417 aa8.36□□□□□ -1.07
SIT4YDL047W SPE2P21182 396 aa8.35□□□□□ -1.07
SIT4YDL047W FKS3Q04952 1785 aa8.34□□□□□ -1.07
SIT4YDL047W LEU2P04173 364 aaPredicted RBP8.33□□□□□ -1.08
SIT4YDL047W SSA2P10592 639 aaKnown RBP8.32□□□□□ -1.08
SIT4YDL047W MTR4P47047 1073 aaKnown RBP8.32□□□□□ -1.08
SIT4YDL047W LAM6Q08001 693 aa8.32□□□□□ -1.08
SIT4YDL047W PRP40P33203 583 aaKnown RBP8.31□□□□□ -1.08
SIT4YDL047W CSE4P36012 229 aa8.31□□□□□ -1.08
SIT4YDL047W PRY3P47033 881 aa8.31□□□□□ -1.08
SIT4YDL047W KIP3P53086 805 aaKnown RBP8.31□□□□□ -1.08
SIT4YDL047W YKL133CP36066 463 aa8.3□□□□□ -1.08
SIT4YDL047W CTH1P47976 325 aa8.3□□□□□ -1.08
SIT4YDL047W RPS24AP0CX31 135 aaKnown RBP8.29□□□□□ -1.08
SIT4YDL047W RPS24BP0CX32 135 aaKnown RBP8.29□□□□□ -1.08
SIT4YDL047W ENP1P38333 483 aaKnown RBP8.29□□□□□ -1.08
SIT4YDL047W CHZ1P40019 153 aaPredicted RBP8.29□□□□□ -1.08
SIT4YDL047W COBP00163 385 aa8.28□□□□□ -1.08
SIT4YDL047W YKR075CP36155 307 aa8.27□□□□□ -1.09
SIT4YDL047W XKS1P42826 600 aa8.27□□□□□ -1.09
SIT4YDL047W YIL177CP40434 1758 aa8.22□□□□□ -1.09
SIT4YDL047W YJL225CP40889 1758 aa8.22□□□□□ -1.09
SIT4YDL047W APC1P53886 1748 aa8.22□□□□□ -1.09
SIT4YDL047W YRF1-4O13559 1382 aa8.22□□□□□ -1.09
SIT4YDL047W SCT1P32784 759 aa8.21□□□□□ -1.1
SIT4YDL047W SPT7P35177 1332 aa8.2□□□□□ -1.1
SIT4YDL047W MEC3Q02574 474 aa8.19□□□□□ -1.1
SIT4YDL047W BDF1P35817 686 aa8.18□□□□□ -1.1
SIT4YDL047W YLR419WQ06698 1435 aaKnown RBP8.18□□□□□ -1.1
SIT4YDL047W ALD3P54114 506 aa8.17□□□□□ -1.1
SIT4YDL047W YML133CQ03099 1374 aa8.17□□□□□ -1.1
SIT4YDL047W YLL067CQ07888 1374 aa8.17□□□□□ -1.1
SIT4YDL047W YLL066CQ99208 1374 aa8.17□□□□□ -1.1
SIT4YDL047W SNF2P22082 1703 aa8.16□□□□□ -1.1
SIT4YDL047W RCR1P38212 213 aa8.16□□□□□ -1.1
SIT4YDL047W RPG1P38249 964 aaKnown RBP8.16□□□□□ -1.1
SIT4YDL047W ORC1P54784 914 aaPredicted RBP8.16□□□□□ -1.1
SIT4YDL047W FRK1Q03002 865 aaPredicted RBP8.16□□□□□ -1.1
SIT4YDL047W MSB4Q12317 492 aa8.15□□□□□ -1.1
SIT4YDL047W DPS1P04802 557 aaKnown RBP8.14□□□□□ -1.11
SIT4YDL047W ADE16P54113 591 aaKnown RBP8.14□□□□□ -1.11
SIT4YDL047W GAS4Q08271 471 aa8.14□□□□□ -1.11
SIT4YDL047W SIR4P11978 1358 aa8.13□□□□□ -1.11
SIT4YDL047W FKH1P40466 484 aa8.13□□□□□ -1.11
SIT4YDL047W RTF1P53064 558 aa8.13□□□□□ -1.11
SIT4YDL047W PDI1P17967 522 aaKnown RBP8.11□□□□□ -1.11
SIT4YDL047W MLP1Q02455 1875 aaKnown RBP8.11□□□□□ -1.11
SIT4YDL047W RPO41P13433 1351 aaKnown RBP8.1□□□□□ -1.11
SIT4YDL047W ATG13Q06628 738 aa8.1□□□□□ -1.11
SIT4YDL047W BUG1Q12191 341 aa8.1□□□□□ -1.11
SIT4YDL047W RAD4P14736 754 aa8.09□□□□□ -1.11
SIT4YDL047W TOS1P38288 455 aa8.09□□□□□ -1.11
SIT4YDL047W SAP155P43612 1002 aa8.09□□□□□ -1.11
SIT4YDL047W EAF6P47128 113 aa8.09□□□□□ -1.11
SIT4YDL047W RIM15P43565 1770 aa8.09□□□□□ -1.11
SIT4YDL047W UTP22P53254 1237 aaPredicted RBP8.08□□□□□ -1.12
SIT4YDL047W TAP42Q04372 366 aa8.08□□□□□ -1.12
SIT4YDL047W GRE2Q12068 342 aaKnown RBP8.08□□□□□ -1.12
SIT4YDL047W GRX1P25373 110 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms