RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W ESS1P22696 170 aa7.87□□□□□ -1.15
PTC1YDL006W NPL4P33755 580 aa7.87□□□□□ -1.15
PTC1YDL006W RAD59Q12223 238 aa7.87□□□□□ -1.15
PTC1YDL006W SCJ1P25303 377 aa7.86□□□□□ -1.15
PTC1YDL006W SPT23P35210 1082 aa7.86□□□□□ -1.15
PTC1YDL006W CSE4P36012 229 aa7.86□□□□□ -1.15
PTC1YDL006W ELP4Q02884 456 aaKnown RBP7.86□□□□□ -1.15
PTC1YDL006W LAM6Q08001 693 aa7.85□□□□□ -1.15
PTC1YDL006W BMT6Q12291 365 aa7.85□□□□□ -1.15
PTC1YDL006W PDR1P12383 1068 aa7.84□□□□□ -1.15
PTC1YDL006W SLY41P22215 453 aa7.84□□□□□ -1.15
PTC1YDL006W YBL036CP38197 257 aa7.84□□□□□ -1.15
PTC1YDL006W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
PTC1YDL006W KEX2P13134 814 aa7.82□□□□□ -1.16
PTC1YDL006W RAM1P22007 431 aa7.82□□□□□ -1.16
PTC1YDL006W YJU3P28321 313 aa7.82□□□□□ -1.16
PTC1YDL006W PRE3P38624 215 aa7.82□□□□□ -1.16
PTC1YDL006W YJL171CP46992 396 aa7.82□□□□□ -1.16
PTC1YDL006W STR2P47164 639 aa7.82□□□□□ -1.16
PTC1YDL006W YDR344CQ05510 147 aa7.82□□□□□ -1.16
PTC1YDL006W ARG8P18544 423 aa7.81□□□□□ -1.16
PTC1YDL006W RSC30P38781 883 aa7.81□□□□□ -1.16
PTC1YDL006W PTC2P39966 464 aaKnown RBP7.81□□□□□ -1.16
PTC1YDL006W YJL007CP47080 104 aa7.8□□□□□ -1.16
PTC1YDL006W ISM1P48526 1002 aa7.8□□□□□ -1.16
PTC1YDL006W SPT5P27692 1063 aaKnown RBP7.79□□□□□ -1.16
PTC1YDL006W BIM1P40013 344 aa7.79□□□□□ -1.16
PTC1YDL006W PUS6P53294 404 aa7.79□□□□□ -1.16
PTC1YDL006W YML082WQ04533 649 aaKnown RBP7.79□□□□□ -1.16
PTC1YDL006W CHL1P22516 861 aaPredicted RBP7.78□□□□□ -1.16
PTC1YDL006W TRM1P15565 570 aaKnown RBP7.77□□□□□ -1.17
PTC1YDL006W ERF2Q06551 359 aa7.77□□□□□ -1.17
PTC1YDL006W MAK16P10962 306 aaPredicted RBP7.76□□□□□ -1.17
PTC1YDL006W BIO2P32451 375 aa7.76□□□□□ -1.17
PTC1YDL006W ATG32P40458 529 aa7.76□□□□□ -1.17
PTC1YDL006W RPL34BP40525 121 aaKnown RBP7.76□□□□□ -1.17
PTC1YDL006W TBF1Q02457 562 aa7.76□□□□□ -1.17
PTC1YDL006W TY1A-DR4O74302 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-HP0C2I4 478 aaKnown RBP7.75□□□□□ -1.17
PTC1YDL006W TY1A-AP0CX57 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-PR1P0CX58 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-ORP0CX59 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-PR2P0CX60 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-DR5P0CX65 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-ER2P0CX66 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-GR3P0CX67 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-LR1P0CX68 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-MR2P0CX69 440 aa7.75□□□□□ -1.17
PTC1YDL006W GCD11P32481 527 aaKnown RBP7.75□□□□□ -1.17
PTC1YDL006W TY1A-JR2P47099 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-DR1Q03856 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-ML1Q04706 440 aaKnown RBP7.75□□□□□ -1.17
PTC1YDL006W BUD20Q08004 166 aaPredicted RBP7.75□□□□□ -1.17
PTC1YDL006W TY1A-BRQ12217 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-NL2Q12470 440 aa7.75□□□□□ -1.17
PTC1YDL006W TY1A-GR2Q12485 440 aa7.75□□□□□ -1.17
PTC1YDL006W AGE1Q04412 482 aa7.74□□□□□ -1.17
PTC1YDL006W PRT1P06103 763 aaKnown RBP7.73□□□□□ -1.17
PTC1YDL006W TIF1P10081 395 aaKnown RBP7.73□□□□□ -1.17
PTC1YDL006W NAF1P53919 492 aaKnown RBP7.73□□□□□ -1.17
PTC1YDL006W YPR015CQ12531 247 aa7.73□□□□□ -1.17
PTC1YDL006W SEC2P17065 759 aa7.72□□□□□ -1.17
PTC1YDL006W TUB4P53378 473 aa7.72□□□□□ -1.17
PTC1YDL006W SUP45P12385 437 aaKnown RBP7.7□□□□□ -1.18
PTC1YDL006W RPA14P50106 137 aa7.7□□□□□ -1.18
PTC1YDL006W PAT1P25644 796 aaKnown RBP7.69□□□□□ -1.18
PTC1YDL006W YDL206WQ12424 762 aa7.69□□□□□ -1.18
PTC1YDL006W SAS4Q04003 481 aa7.68□□□□□ -1.18
PTC1YDL006W YPP1P46951 817 aa7.67□□□□□ -1.18
PTC1YDL006W YNL108CP53929 270 aa7.67□□□□□ -1.18
PTC1YDL006W YPR097WQ06839 1073 aa7.67□□□□□ -1.18
PTC1YDL006W RTG2P32608 588 aaKnown RBP7.66□□□□□ -1.18
PTC1YDL006W ALR1Q08269 859 aa7.66□□□□□ -1.18
PTC1YDL006W SIS2P36024 562 aa7.65□□□□□ -1.18
PTC1YDL006W PAC1P39946 494 aaKnown RBP7.65□□□□□ -1.18
PTC1YDL006W RRN7P40992 514 aa7.65□□□□□ -1.18
PTC1YDL006W ERG12P07277 443 aa7.64□□□□□ -1.19
PTC1YDL006W KXD1P53158 218 aa7.64□□□□□ -1.19
PTC1YDL006W ENO2P00925 437 aaKnown RBP7.63□□□□□ -1.19
PTC1YDL006W YDJ1P25491 409 aaKnown RBP7.63□□□□□ -1.19
PTC1YDL006W TPD3P31383 635 aa7.63□□□□□ -1.19
PTC1YDL006W SPT16P32558 1035 aaKnown RBP7.63□□□□□ -1.19
PTC1YDL006W RIM21P48565 533 aa7.63□□□□□ -1.19
PTC1YDL006W YPR204WQ08995 1032 aa7.63□□□□□ -1.19
PTC1YDL006W PDC1P06169 563 aaKnown RBP7.62□□□□□ -1.19
PTC1YDL006W SSA4P22202 642 aaKnown RBP7.62□□□□□ -1.19
PTC1YDL006W GYP1Q08484 637 aa7.62□□□□□ -1.19
PTC1YDL006W MCM16Q12262 181 aa7.61□□□□□ -1.19
PTC1YDL006W TTI1P36097 1038 aa7.6□□□□□ -1.19
PTC1YDL006W MRX10Q05648 414 aa7.6□□□□□ -1.19
PTC1YDL006W TEC1P18412 486 aa7.59□□□□□ -1.19
PTC1YDL006W HXT10P43581 546 aa7.59□□□□□ -1.19
PTC1YDL006W SUB2Q07478 446 aaKnown RBP7.59□□□□□ -1.19
PTC1YDL006W ENO1P00924 437 aaKnown RBP7.58□□□□□ -1.2
PTC1YDL006W MRF1P30775 413 aaPredicted RBP7.58□□□□□ -1.2
PTC1YDL006W MRX12P47084 519 aa7.58□□□□□ -1.2
PTC1YDL006W SSA1P10591 642 aaKnown RBP7.57□□□□□ -1.2
PTC1YDL006W RRD1P40454 393 aaKnown RBP7.57□□□□□ -1.2
PTC1YDL006W MOD5P07884 428 aa7.56□□□□□ -1.2
PTC1YDL006W GUT2P32191 649 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms