RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C RRP46P53256 223 aaPredicted RBP7.41□□□□□ -1.22
SSK22YCR073C SUI2P20459 304 aaKnown RBP7.4□□□□□ -1.22
SSK22YCR073C TRK1P12685 1235 aa7.39□□□□□ -1.23
SSK22YCR073C BNR1P40450 1375 aa7.37□□□□□ -1.23
SSK22YCR073C URB1P34241 1764 aaKnown RBP7.37□□□□□ -1.23
SSK22YCR073C TCB2P48231 1178 aa7.36□□□□□ -1.23
SSK22YCR073C ROX1P25042 368 aa7.36□□□□□ -1.23
SSK22YCR073C YAP3P38749 330 aa7.36□□□□□ -1.23
SSK22YCR073C VPS27P40343 622 aaKnown RBP7.35□□□□□ -1.23
SSK22YCR073C CDC45Q08032 650 aa7.35□□□□□ -1.23
SSK22YCR073C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
SSK22YCR073C KNS1P32350 737 aaPredicted RBP7.35□□□□□ -1.23
SSK22YCR073C MET10P39692 1035 aa7.35□□□□□ -1.23
SSK22YCR073C SLN1P39928 1220 aaPredicted RBP7.34□□□□□ -1.23
SSK22YCR073C YRF1-4O13559 1382 aa7.33□□□□□ -1.24
SSK22YCR073C BUD21Q08492 214 aaPredicted RBP7.33□□□□□ -1.24
SSK22YCR073C FKH1P40466 484 aa7.32□□□□□ -1.24
SSK22YCR073C PCT1P13259 424 aa7.32□□□□□ -1.24
SSK22YCR073C YFR016CP43597 1233 aaKnown RBP7.32□□□□□ -1.24
SSK22YCR073C CKB1P43639 278 aa7.32□□□□□ -1.24
SSK22YCR073C NOP7P53261 605 aaKnown RBP7.32□□□□□ -1.24
SSK22YCR073C NUP145P49687 1317 aa7.31□□□□□ -1.24
SSK22YCR073C ORC1P54784 914 aaPredicted RBP7.3□□□□□ -1.24
SSK22YCR073C HEF3P53978 1044 aaKnown RBP7.3□□□□□ -1.24
SSK22YCR073C AUS1Q08409 1394 aa7.3□□□□□ -1.24
SSK22YCR073C RTG3P38165 486 aa7.29□□□□□ -1.24
SSK22YCR073C KIP3P53086 805 aaKnown RBP7.28□□□□□ -1.24
SSK22YCR073C TAF5P38129 798 aa7.27□□□□□ -1.25
SSK22YCR073C SIR4P11978 1358 aa7.27□□□□□ -1.25
SSK22YCR073C KRE5P22023 1365 aa7.26□□□□□ -1.25
SSK22YCR073C FKS3Q04952 1785 aa7.26□□□□□ -1.25
SSK22YCR073C YIL092WP40497 633 aa7.26□□□□□ -1.25
SSK22YCR073C YRB30P53107 440 aaPredicted RBP7.25□□□□□ -1.25
SSK22YCR073C UTP10P42945 1769 aaKnown RBP7.25□□□□□ -1.25
SSK22YCR073C RAD9P14737 1309 aa7.24□□□□□ -1.25
SSK22YCR073C YDL144CQ07589 356 aa7.23□□□□□ -1.25
SSK22YCR073C ROM2P51862 1356 aaKnown RBP7.23□□□□□ -1.25
SSK22YCR073C NOT3P06102 836 aaKnown RBP7.23□□□□□ -1.25
SSK22YCR073C KRE33P53914 1056 aaKnown RBP7.22□□□□□ -1.25
SSK22YCR073C THI22Q06490 572 aa7.22□□□□□ -1.25
SSK22YCR073C MSP1P28737 362 aa7.21□□□□□ -1.25
SSK22YCR073C ESL2P36168 1195 aa7.21□□□□□ -1.25
SSK22YCR073C SAP155P43612 1002 aa7.21□□□□□ -1.25
SSK22YCR073C ILV3P39522 585 aaKnown RBP7.2□□□□□ -1.26
SSK22YCR073C LSP1Q12230 341 aaKnown RBP7.2□□□□□ -1.26
SSK22YCR073C RQC2Q12532 1038 aaKnown RBP7.2□□□□□ -1.26
SSK22YCR073C PSK1P31374 1356 aa7.2□□□□□ -1.26
SSK22YCR073C MPP10P47083 593 aaKnown RBP7.19□□□□□ -1.26
SSK22YCR073C DJP1P40564 432 aa7.18□□□□□ -1.26
SSK22YCR073C POL32P47110 350 aa7.18□□□□□ -1.26
SSK22YCR073C FAS2P19097 1887 aaKnown RBP7.18□□□□□ -1.26
SSK22YCR073C CTR9P89105 1077 aa7.18□□□□□ -1.26
SSK22YCR073C RRT14P40470 206 aa7.18□□□□□ -1.26
SSK22YCR073C SPE2P21182 396 aa7.18□□□□□ -1.26
SSK22YCR073C TEA1P47988 759 aa7.17□□□□□ -1.26
SSK22YCR073C SIS2P36024 562 aa7.16□□□□□ -1.26
SSK22YCR073C HAP5Q02516 242 aa7.15□□□□□ -1.26
SSK22YCR073C PRD1P25375 712 aa7.13□□□□□ -1.27
SSK22YCR073C TYS1P36421 394 aaKnown RBP7.12□□□□□ -1.27
SSK22YCR073C PAF1P38351 445 aa7.12□□□□□ -1.27
SSK22YCR073C MTC1P47018 478 aaKnown RBP7.11□□□□□ -1.27
SSK22YCR073C RTT109Q07794 436 aa7.1□□□□□ -1.27
SSK22YCR073C CIR1P42940 261 aa7.09□□□□□ -1.27
SSK22YCR073C ALD4P46367 519 aaKnown RBP7.09□□□□□ -1.28
SSK22YCR073C EAF7P53911 425 aaKnown RBP7.09□□□□□ -1.28
SSK22YCR073C MBR1P23493 339 aa7.07□□□□□ -1.28
SSK22YCR073C HIM1Q06674 414 aa7.07□□□□□ -1.28
SSK22YCR073C PIL1P53252 339 aaKnown RBP7.06□□□□□ -1.28
SSK22YCR073C YRF1-3P0CX14 1859 aa7.06□□□□□ -1.28
SSK22YCR073C YRF1-7P0CX15 1859 aa7.06□□□□□ -1.28
SSK22YCR073C YRF1-6P53819 1859 aa7.06□□□□□ -1.28
SSK22YCR073C VPS24P36095 224 aaKnown RBP7.06□□□□□ -1.28
SSK22YCR073C TAF8Q03750 510 aa7.06□□□□□ -1.28
SSK22YCR073C RKM3P38222 552 aa7.05□□□□□ -1.28
SSK22YCR073C CHZ1P40019 153 aaPredicted RBP7.04□□□□□ -1.28
SSK22YCR073C DAL5P15365 543 aa7.04□□□□□ -1.28
SSK22YCR073C TRL1P09880 827 aaKnown RBP7.04□□□□□ -1.28
SSK22YCR073C PPH3P32345 308 aa7.04□□□□□ -1.28
SSK22YCR073C TPD3P31383 635 aa7.03□□□□□ -1.28
SSK22YCR073C NPA3P47122 385 aa7.03□□□□□ -1.28
SSK22YCR073C TAP42Q04372 366 aa7.03□□□□□ -1.28
SSK22YCR073C ARL1P38116 183 aaKnown RBP7.02□□□□□ -1.28
SSK22YCR073C ADE6P38972 1358 aaKnown RBP7.02□□□□□ -1.29
SSK22YCR073C IPL1P38991 367 aa7.02□□□□□ -1.29
SSK22YCR073C YGR130CP53278 816 aa7.02□□□□□ -1.29
SSK22YCR073C MPE1P35728 441 aaKnown RBP7.01□□□□□ -1.29
SSK22YCR073C RLF2Q12495 606 aa7.01□□□□□ -1.29
SSK22YCR073C BDH2P39713 417 aa7.01□□□□□ -1.29
SSK22YCR073C BUD27P43573 796 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
SSK22YCR073C LYS2P07702 1392 aa7□□□□□ -1.29
SSK22YCR073C URN1Q06525 465 aaKnown RBP7□□□□□ -1.29
SSK22YCR073C CDC16P09798 840 aa6.99□□□□□ -1.29
SSK22YCR073C HRQ1Q05549 1077 aa6.99□□□□□ -1.29
SSK22YCR073C TRP5P00931 707 aaKnown RBP6.98□□□□□ -1.29
SSK22YCR073C RTR1P40084 226 aaPredicted RBP6.98□□□□□ -1.29
SSK22YCR073C RPO41P13433 1351 aaKnown RBP6.98□□□□□ -1.29
SSK22YCR073C MCM2P29469 868 aa6.98□□□□□ -1.29
SSK22YCR073C SPT21P35209 758 aa6.98□□□□□ -1.29
SSK22YCR073C HYR1P40581 163 aaKnown RBP6.98□□□□□ -1.29
SSK22YCR073C RAD2P07276 1031 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms