RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W SLX5P32828 619 aaKnown RBP8.13□□□□□ -1.11
CNE1YAL058W SEC3P33332 1336 aaKnown RBP8.13□□□□□ -1.11
CNE1YAL058W PDR11P40550 1411 aa8.11□□□□□ -1.11
CNE1YAL058W TIF4632P39936 914 aaKnown RBP8.1□□□□□ -1.11
CNE1YAL058W YIL055CP40523 627 aaKnown RBP8.09□□□□□ -1.11
CNE1YAL058W PAF1P38351 445 aa8.08□□□□□ -1.12
CNE1YAL058W THI12P42883 340 aa8.08□□□□□ -1.12
CNE1YAL058W THI5P43534 340 aa8.08□□□□□ -1.12
CNE1YAL058W THI11P47183 340 aa8.08□□□□□ -1.12
CNE1YAL058W THI13Q07748 340 aa8.08□□□□□ -1.12
CNE1YAL058W PTP3P40048 928 aa8.08□□□□□ -1.12
CNE1YAL058W RAV1P47104 1357 aa8.07□□□□□ -1.12
CNE1YAL058W KRE5P22023 1365 aa8.05□□□□□ -1.12
CNE1YAL058W BCK1Q01389 1478 aa8.04□□□□□ -1.12
CNE1YAL058W TGL3P40308 642 aa8.03□□□□□ -1.12
CNE1YAL058W MRX12P47084 519 aa8.03□□□□□ -1.12
CNE1YAL058W CFT1Q06632 1357 aaKnown RBP8.03□□□□□ -1.12
CNE1YAL058W NOP7P53261 605 aaKnown RBP8.03□□□□□ -1.12
CNE1YAL058W NUP192P47054 1683 aa8.03□□□□□ -1.12
CNE1YAL058W LEU3P08638 886 aa8.01□□□□□ -1.13
CNE1YAL058W RIA1P53893 1110 aa8.01□□□□□ -1.13
CNE1YAL058W MHP1P43638 1398 aa8.01□□□□□ -1.13
CNE1YAL058W YLR419WQ06698 1435 aaKnown RBP8□□□□□ -1.13
CNE1YAL058W PRS1P32895 427 aaKnown RBP8□□□□□ -1.13
CNE1YAL058W EPS1P40557 701 aa8□□□□□ -1.13
CNE1YAL058W RTC1Q08281 1341 aa8□□□□□ -1.13
CNE1YAL058W PSD2P53037 1138 aaKnown RBP7.98□□□□□ -1.13
CNE1YAL058W TY3B-IQ7LHG5 1498 aaKnown RBP7.98□□□□□ -1.13
CNE1YAL058W ORC1P54784 914 aaPredicted RBP7.97□□□□□ -1.13
CNE1YAL058W BUD31P25337 157 aaPredicted RBP7.96□□□□□ -1.14
CNE1YAL058W BDF1P35817 686 aa7.96□□□□□ -1.14
CNE1YAL058W RSM7P47150 247 aa7.95□□□□□ -1.14
CNE1YAL058W YNR029CP53729 429 aaKnown RBP7.95□□□□□ -1.14
CNE1YAL058W CAB1Q04430 367 aa7.95□□□□□ -1.14
CNE1YAL058W YAH1Q12184 172 aaKnown RBP7.95□□□□□ -1.14
CNE1YAL058W RAD9P14737 1309 aa7.95□□□□□ -1.14
CNE1YAL058W ALD4P46367 519 aaKnown RBP7.93□□□□□ -1.14
CNE1YAL058W NAP1P25293 417 aaKnown RBP7.91□□□□□ -1.14
CNE1YAL058W BBC1P47068 1157 aa7.9□□□□□ -1.14
CNE1YAL058W AI2P03876 854 aa7.88□□□□□ -1.15
CNE1YAL058W MLP1Q02455 1875 aaKnown RBP7.87□□□□□ -1.15
CNE1YAL058W ESL2P36168 1195 aa7.87□□□□□ -1.15
CNE1YAL058W NST1P53935 1240 aa7.87□□□□□ -1.15
CNE1YAL058W TAF5P38129 798 aa7.85□□□□□ -1.15
CNE1YAL058W TAF8Q03750 510 aa7.83□□□□□ -1.16
CNE1YAL058W PDS5Q04264 1277 aa7.83□□□□□ -1.16
CNE1YAL058W APP1P53933 587 aa7.83□□□□□ -1.16
CNE1YAL058W YLR271WQ06152 274 aa7.82□□□□□ -1.16
CNE1YAL058W YRF1-2P40105 1681 aa7.81□□□□□ -1.16
CNE1YAL058W UBP9P39967 754 aa7.8□□□□□ -1.16
CNE1YAL058W RCM1P53972 490 aa7.79□□□□□ -1.16
CNE1YAL058W RRP5Q05022 1729 aaKnown RBP7.79□□□□□ -1.16
CNE1YAL058W CPS1P27614 576 aa7.78□□□□□ -1.16
CNE1YAL058W KIP3P53086 805 aaKnown RBP7.78□□□□□ -1.16
CNE1YAL058W SNF2P22082 1703 aa7.77□□□□□ -1.16
CNE1YAL058W FUN12P39730 1002 aaKnown RBP7.77□□□□□ -1.17
CNE1YAL058W SPE2P21182 396 aa7.76□□□□□ -1.17
CNE1YAL058W TY4B-HP0C2J7 1802 aa7.76□□□□□ -1.17
CNE1YAL058W TY4B-JP47024 1803 aa7.76□□□□□ -1.17
CNE1YAL058W ENT1Q12518 454 aa7.75□□□□□ -1.17
CNE1YAL058W PSK1P31374 1356 aa7.74□□□□□ -1.17
CNE1YAL058W GLN1P32288 370 aaKnown RBP7.74□□□□□ -1.17
CNE1YAL058W SSP1P38871 571 aa7.74□□□□□ -1.17
CNE1YAL058W PRP45P28004 379 aaPredicted RBP7.73□□□□□ -1.17
CNE1YAL058W PPH3P32345 308 aa7.73□□□□□ -1.17
CNE1YAL058W ENV9Q08651 330 aa7.73□□□□□ -1.17
CNE1YAL058W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17 RIP-Chip
CNE1YAL058W SCT1P32784 759 aa7.72□□□□□ -1.17
CNE1YAL058W ADE6P38972 1358 aaKnown RBP7.71□□□□□ -1.17
CNE1YAL058W IMH1Q06704 911 aaKnown RBP7.71□□□□□ -1.18
CNE1YAL058W YOR238WQ08634 303 aa7.7□□□□□ -1.18
CNE1YAL058W MST1P07236 462 aa7.69□□□□□ -1.18
CNE1YAL058W PRP5P21372 849 aaPredicted RBP7.68□□□□□ -1.18
CNE1YAL058W RTG3P38165 486 aa7.68□□□□□ -1.18
CNE1YAL058W YMR074CQ04773 145 aa7.68□□□□□ -1.18
CNE1YAL058W RVB2Q12464 471 aaKnown RBP7.67□□□□□ -1.18
CNE1YAL058W CHZ1P40019 153 aaPredicted RBP7.66□□□□□ -1.18
CNE1YAL058W YAP5P40574 245 aa7.66□□□□□ -1.18
CNE1YAL058W CDC45Q08032 650 aa7.66□□□□□ -1.18
CNE1YAL058W RPP0P05317 312 aaKnown RBP7.65□□□□□ -1.18
CNE1YAL058W VPS27P40343 622 aaKnown RBP7.65□□□□□ -1.18
CNE1YAL058W MTR4P47047 1073 aaKnown RBP7.65□□□□□ -1.18
CNE1YAL058W LEU2P04173 364 aaPredicted RBP7.64□□□□□ -1.19
CNE1YAL058W TRK1P12685 1235 aa7.63□□□□□ -1.19
CNE1YAL058W RPC31P17890 251 aa7.63□□□□□ -1.19
CNE1YAL058W MSB3P48566 633 aaPredicted RBP7.63□□□□□ -1.19
CNE1YAL058W YEF3P16521 1044 aaKnown RBP7.62□□□□□ -1.19
CNE1YAL058W CSE4P36012 229 aa7.62□□□□□ -1.19
CNE1YAL058W URB1P34241 1764 aaKnown RBP7.62□□□□□ -1.19
CNE1YAL058W YDL144CQ07589 356 aa7.62□□□□□ -1.19
CNE1YAL058W RSF2P46974 1380 aa7.61□□□□□ -1.19
CNE1YAL058W YML133CQ03099 1374 aa7.61□□□□□ -1.19
CNE1YAL058W YLL067CQ07888 1374 aa7.61□□□□□ -1.19
CNE1YAL058W YLL066CQ99208 1374 aa7.61□□□□□ -1.19
CNE1YAL058W FKH1P40466 484 aa7.61□□□□□ -1.19
CNE1YAL058W PRP43P53131 767 aaKnown RBP7.61□□□□□ -1.19
CNE1YAL058W TCB1Q12466 1186 aa7.61□□□□□ -1.19
CNE1YAL058W RPS24AP0CX31 135 aaKnown RBP7.6□□□□□ -1.19
CNE1YAL058W RPS24BP0CX32 135 aaKnown RBP7.6□□□□□ -1.19
CNE1YAL058W SUI2P20459 304 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms