RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C PSK1P31374 1356 aa18.06■□□□□ 0.48
SSA1YAL005C MHP1P43638 1398 aa18.06■□□□□ 0.48
SSA1YAL005C PTP3P40048 928 aa18■□□□□ 0.47
SSA1YAL005C SCT1P32784 759 aa17.99■□□□□ 0.47
SSA1YAL005C YML133CQ03099 1374 aa17.98■□□□□ 0.47
SSA1YAL005C YLL067CQ07888 1374 aa17.98■□□□□ 0.47
SSA1YAL005C YLL066CQ99208 1374 aa17.98■□□□□ 0.47
SSA1YAL005C PDS5Q04264 1277 aa17.94■□□□□ 0.46
SSA1YAL005C MLP1Q02455 1875 aaKnown RBP17.93■□□□□ 0.46
SSA1YAL005C FKH1P40466 484 aa17.93■□□□□ 0.46
SSA1YAL005C RTG3P38165 486 aa17.92■□□□□ 0.46
SSA1YAL005C ADE6P38972 1358 aaKnown RBP17.91■□□□□ 0.46
SSA1YAL005C TY4B-HP0C2J7 1802 aa17.91■□□□□ 0.46
SSA1YAL005C TY4B-JP47024 1803 aa17.91■□□□□ 0.46
SSA1YAL005C LEU2P04173 364 aaPredicted RBP17.88■□□□□ 0.45
SSA1YAL005C MTR4P47047 1073 aaKnown RBP17.84■□□□□ 0.45
SSA1YAL005C RRP5Q05022 1729 aaKnown RBP17.81■□□□□ 0.44
SSA1YAL005C PRP43P53131 767 aaKnown RBP17.8■□□□□ 0.44
SSA1YAL005C RPS24AP0CX31 135 aaKnown RBP17.79■□□□□ 0.44
SSA1YAL005C RPS24BP0CX32 135 aaKnown RBP17.79■□□□□ 0.44
SSA1YAL005C APP1P53933 587 aa17.79■□□□□ 0.44
SSA1YAL005C NST1P53935 1240 aa17.79■□□□□ 0.44
SSA1YAL005C CSE4P36012 229 aa17.78■□□□□ 0.44
SSA1YAL005C PSD2P53037 1138 aaKnown RBP17.78■□□□□ 0.44
SSA1YAL005C YAH1Q12184 172 aaKnown RBP17.78■□□□□ 0.44
SSA1YAL005C PRP45P28004 379 aaPredicted RBP17.78■□□□□ 0.44
SSA1YAL005C REB1P21538 810 aa17.76■□□□□ 0.43
SSA1YAL005C SPT7P35177 1332 aa17.75■□□□□ 0.43
SSA1YAL005C PRP5P21372 849 aaPredicted RBP17.73■□□□□ 0.43
SSA1YAL005C ENT1Q12518 454 aa17.72■□□□□ 0.43
SSA1YAL005C SEC3P33332 1336 aaKnown RBP17.72■□□□□ 0.43
SSA1YAL005C PDI1P17967 522 aaKnown RBP17.68■□□□□ 0.42
SSA1YAL005C MSB3P48566 633 aaPredicted RBP17.67■□□□□ 0.42
SSA1YAL005C YIL177CP40434 1758 aa17.67■□□□□ 0.42
SSA1YAL005C YJL225CP40889 1758 aa17.67■□□□□ 0.42
SSA1YAL005C LEU3P08638 886 aa17.66■□□□□ 0.42
SSA1YAL005C YEF3P16521 1044 aaKnown RBP17.66■□□□□ 0.42
SSA1YAL005C YRF1-2P40105 1681 aa17.66■□□□□ 0.42
SSA1YAL005C AUS1Q08409 1394 aa17.65■□□□□ 0.42
SSA1YAL005C ENV9Q08651 330 aa17.64■□□□□ 0.42
SSA1YAL005C TAP42Q04372 366 aa17.64■□□□□ 0.41
SSA1YAL005C GAS4Q08271 471 aa17.63■□□□□ 0.41
SSA1YAL005C RTF1P53064 558 aa17.62■□□□□ 0.41
SSA1YAL005C HIM1Q06674 414 aa17.62■□□□□ 0.41
SSA1YAL005C TRK1P12685 1235 aa17.6■□□□□ 0.41
SSA1YAL005C SLM3Q12093 417 aa17.6■□□□□ 0.41
SSA1YAL005C DPS1P04802 557 aaKnown RBP17.59■□□□□ 0.41
SSA1YAL005C GRX4P32642 244 aa17.56■□□□□ 0.4
SSA1YAL005C KAR2P16474 682 aaKnown RBP17.53■□□□□ 0.4
SSA1YAL005C TCB1Q12466 1186 aa17.53■□□□□ 0.4
SSA1YAL005C URB1P34241 1764 aaKnown RBP17.52■□□□□ 0.39
SSA1YAL005C IMH1Q06704 911 aaKnown RBP17.51■□□□□ 0.39
SSA1YAL005C YIL055CP40523 627 aaKnown RBP17.51■□□□□ 0.39
SSA1YAL005C FKS3Q04952 1785 aa17.49■□□□□ 0.39
SSA1YAL005C RSF2P46974 1380 aa17.47■□□□□ 0.39
SSA1YAL005C XKS1P42826 600 aa17.45■□□□□ 0.38
SSA1YAL005C APC1P53886 1748 aa17.45■□□□□ 0.38
SSA1YAL005C IES2P40154 320 aa17.43■□□□□ 0.38
SSA1YAL005C YRF1-3P0CX14 1859 aa17.42■□□□□ 0.38
SSA1YAL005C YRF1-7P0CX15 1859 aa17.42■□□□□ 0.38
SSA1YAL005C YRF1-6P53819 1859 aa17.42■□□□□ 0.38
SSA1YAL005C RPO41P13433 1351 aaKnown RBP17.42■□□□□ 0.38
SSA1YAL005C RRP46P53256 223 aaPredicted RBP17.41■□□□□ 0.38
SSA1YAL005C PAP2P53632 584 aaKnown RBP17.41■□□□□ 0.38
SSA1YAL005C BUB1P41695 1021 aaKnown RBP RIP-Chip data17.39■□□□□ 0.37not detected
SSA1YAL005C ENP1P38333 483 aaKnown RBP17.37■□□□□ 0.37
SSA1YAL005C RCR1P38212 213 aa17.35■□□□□ 0.37
SSA1YAL005C SNF2P22082 1703 aa17.33■□□□□ 0.36
SSA1YAL005C GLN1P32288 370 aaKnown RBP17.33■□□□□ 0.36
SSA1YAL005C IOC4Q04213 475 aa17.33■□□□□ 0.36
SSA1YAL005C DOT5P40553 215 aa17.31■□□□□ 0.36
SSA1YAL005C SIR4P11978 1358 aa17.3■□□□□ 0.36
SSA1YAL005C YKL133CP36066 463 aa17.29■□□□□ 0.36
SSA1YAL005C DSD1P53095 428 aa17.29■□□□□ 0.36
SSA1YAL005C AKL1P38080 1108 aaKnown RBP17.29■□□□□ 0.36
SSA1YAL005C YRF1-4O13559 1382 aa17.28■□□□□ 0.36
SSA1YAL005C ROM2P51862 1356 aaKnown RBP17.27■□□□□ 0.36
SSA1YAL005C RTR1P40084 226 aaPredicted RBP17.27■□□□□ 0.35
SSA1YAL005C NSR1P27476 414 aaKnown RBP RIP-Chip data17.26■□□□□ 0.35not detected
SSA1YAL005C FOX2Q02207 900 aaKnown RBP17.25■□□□□ 0.35
SSA1YAL005C YMR074CQ04773 145 aa17.25■□□□□ 0.35
SSA1YAL005C HSP104P31539 908 aaKnown RBP17.23■□□□□ 0.35
SSA1YAL005C ADE16P54113 591 aaKnown RBP17.23■□□□□ 0.35
SSA1YAL005C MPP10P47083 593 aaKnown RBP17.22■□□□□ 0.35
SSA1YAL005C PRD1P25375 712 aa17.21■□□□□ 0.35
SSA1YAL005C YDL144CQ07589 356 aa17.21■□□□□ 0.35
SSA1YAL005C FRK1Q03002 865 aaPredicted RBP17.2■□□□□ 0.34
SSA1YAL005C MEC3Q02574 474 aa17.19■□□□□ 0.34
SSA1YAL005C INP54Q08227 384 aaKnown RBP17.19■□□□□ 0.34
SSA1YAL005C COBP00163 385 aa17.17■□□□□ 0.34
SSA1YAL005C NTH2P35172 780 aa17.16■□□□□ 0.34
SSA1YAL005C THI22Q06490 572 aa17.16■□□□□ 0.34
SSA1YAL005C RPN11P43588 306 aaKnown RBP17.15■□□□□ 0.34
SSA1YAL005C CTF4Q01454 927 aa17.14■□□□□ 0.33
SSA1YAL005C YKR075CP36155 307 aa17.13■□□□□ 0.33
SSA1YAL005C NUP145P49687 1317 aa17.13■□□□□ 0.33
SSA1YAL005C PRS1P32895 427 aaKnown RBP17.11■□□□□ 0.33
SSA1YAL005C AOS1Q06624 347 aa17.11■□□□□ 0.33
SSA1YAL005C OSM1P21375 501 aaKnown RBP17.11■□□□□ 0.33
SSA1YAL005C RPP0P05317 312 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms