RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 KIP3P53086 805 aaKnown RBP20.3■□□□□ 0.84
SCR1SCR1 SCT1P32784 759 aa20.29■□□□□ 0.84
SCR1SCR1 ENV9Q08651 330 aa20.27■□□□□ 0.84
SCR1SCR1 RRP5Q05022 1729 aaKnown RBP20.27■□□□□ 0.83
SCR1SCR1 PPH3P32345 308 aa20.26■□□□□ 0.83
SCR1SCR1 PRP45P28004 379 aaPredicted RBP20.25■□□□□ 0.83
SCR1SCR1 PSK1P31374 1356 aa20.24■□□□□ 0.83
SCR1SCR1 IMH1Q06704 911 aaKnown RBP20.19■□□□□ 0.82
SCR1SCR1 YRF1-2P40105 1681 aa20.19■□□□□ 0.82
SCR1SCR1 ADE6P38972 1358 aaKnown RBP20.17■□□□□ 0.82
SCR1SCR1 PRP5P21372 849 aaPredicted RBP20.15■□□□□ 0.82
SCR1SCR1 TY4B-HP0C2J7 1802 aa20.14■□□□□ 0.81
SCR1SCR1 TY4B-JP47024 1803 aa20.14■□□□□ 0.81
SCR1SCR1 YMR074CQ04773 145 aa20.13■□□□□ 0.81
SCR1SCR1 YLR419WQ06698 1435 aaKnown RBP20.12■□□□□ 0.81
SCR1SCR1 CHZ1P40019 153 aaPredicted RBP20.12■□□□□ 0.81
SCR1SCR1 LEU2P04173 364 aaPredicted RBP20.07■□□□□ 0.8
SCR1SCR1 MTR4P47047 1073 aaKnown RBP20.07■□□□□ 0.8
SCR1SCR1 ORC1P54784 914 aaPredicted RBP20.05■□□□□ 0.8
SCR1SCR1 PRP43P53131 767 aaKnown RBP20.02■□□□□ 0.8
SCR1SCR1 MSB3P48566 633 aaPredicted RBP19.99■□□□□ 0.79
SCR1SCR1 PRI1P10363 409 aa19.98■□□□□ 0.79
SCR1SCR1 CSE4P36012 229 aa19.97■□□□□ 0.79
SCR1SCR1 LEU3P08638 886 aa19.95■□□□□ 0.78
SCR1SCR1 TCB1Q12466 1186 aa19.95■□□□□ 0.78
SCR1SCR1 SLM3Q12093 417 aa19.91■□□□□ 0.78
SCR1SCR1 RPS24AP0CX31 135 aaKnown RBP19.9■□□□□ 0.78
SCR1SCR1 RPS24BP0CX32 135 aaKnown RBP19.9■□□□□ 0.78
SCR1SCR1 IES2P40154 320 aa19.89■□□□□ 0.77
SCR1SCR1 RSF2P46974 1380 aa19.89■□□□□ 0.77
SCR1SCR1 BUD31P25337 157 aaPredicted RBP19.85■□□□□ 0.77
SCR1SCR1 ROM2P51862 1356 aaKnown RBP19.84■□□□□ 0.77
SCR1SCR1 URB1P34241 1764 aaKnown RBP19.84■□□□□ 0.77
SCR1SCR1 YML133CQ03099 1374 aa19.83■□□□□ 0.77
SCR1SCR1 YLL067CQ07888 1374 aa19.83■□□□□ 0.77
SCR1SCR1 YLL066CQ99208 1374 aa19.83■□□□□ 0.77
SCR1SCR1 UBP1P25037 809 aa19.82■□□□□ 0.76
SCR1SCR1 EDE1P34216 1381 aa19.82■□□□□ 0.76
SCR1SCR1 FKH1P40466 484 aa19.81■□□□□ 0.76
SCR1SCR1 ENP1P38333 483 aaKnown RBP19.8■□□□□ 0.76
SCR1SCR1 MLP1Q02455 1875 aaKnown RBP19.78■□□□□ 0.76
SCR1SCR1 YEF3P16521 1044 aaKnown RBP19.78■□□□□ 0.76
SCR1SCR1 RTF1P53064 558 aa19.77■□□□□ 0.76
SCR1SCR1 PDI1P17967 522 aaKnown RBP19.76■□□□□ 0.75
SCR1SCR1 DOT5P40553 215 aa19.76■□□□□ 0.75
SCR1SCR1 POL5P39985 1022 aaKnown RBP19.74■□□□□ 0.75
SCR1SCR1 XKS1P42826 600 aa19.72■□□□□ 0.75
SCR1SCR1 RPN11P43588 306 aaKnown RBP19.72■□□□□ 0.75
SCR1SCR1 FKS3Q04952 1785 aa19.7■□□□□ 0.74
SCR1SCR1 DPS1P04802 557 aaKnown RBP19.68■□□□□ 0.74
SCR1SCR1 YKL133CP36066 463 aa19.68■□□□□ 0.74
SCR1SCR1 YJL181WP46987 611 aa19.68■□□□□ 0.74
SCR1SCR1 FOX2Q02207 900 aaKnown RBP19.68■□□□□ 0.74
SCR1SCR1 MHP1P43638 1398 aa19.68■□□□□ 0.74
SCR1SCR1 YRF1-3P0CX14 1859 aa19.67■□□□□ 0.74
SCR1SCR1 YRF1-7P0CX15 1859 aa19.67■□□□□ 0.74
SCR1SCR1 YRF1-6P53819 1859 aa19.67■□□□□ 0.74
SCR1SCR1 RTG3P38165 486 aa19.67■□□□□ 0.74
SCR1SCR1 LAM6Q08001 693 aa19.66■□□□□ 0.74
SCR1SCR1 APC1P53886 1748 aa19.65■□□□□ 0.74
SCR1SCR1 YIL177CP40434 1758 aa19.65■□□□□ 0.74
SCR1SCR1 YJL225CP40889 1758 aa19.65■□□□□ 0.74
SCR1SCR1 GRX4P32642 244 aa19.65■□□□□ 0.74
SCR1SCR1 TAP42Q04372 366 aa19.65■□□□□ 0.74
SCR1SCR1 GAS4Q08271 471 aa19.65■□□□□ 0.74
SCR1SCR1 PRP40P33203 583 aaKnown RBP19.61■□□□□ 0.73
SCR1SCR1 PDS5Q04264 1277 aa19.6■□□□□ 0.73
SCR1SCR1 MEC3Q02574 474 aa19.59■□□□□ 0.73
SCR1SCR1 GTT3P39996 337 aa19.58■□□□□ 0.72
SCR1SCR1 SEC3P33332 1336 aaKnown RBP19.55■□□□□ 0.72
SCR1SCR1 SIR4P11978 1358 aa19.55■□□□□ 0.72
SCR1SCR1 COBP00163 385 aa19.54■□□□□ 0.72
SCR1SCR1 NPR2P39923 615 aa19.53■□□□□ 0.72
SCR1SCR1 UGA2P38067 497 aa19.51■□□□□ 0.71
SCR1SCR1 YBL086CP38177 466 aa19.51■□□□□ 0.71
SCR1SCR1 AUS1Q08409 1394 aa19.51■□□□□ 0.71
SCR1SCR1 YRF1-4O13559 1382 aa19.5■□□□□ 0.71
SCR1SCR1 RCR1P38212 213 aa19.5■□□□□ 0.71
SCR1SCR1 ALD2P47771 506 aa19.49■□□□□ 0.71
SCR1SCR1 YKR075CP36155 307 aa19.48■□□□□ 0.71
SCR1SCR1 SNF2P22082 1703 aa19.48■□□□□ 0.71
SCR1SCR1 KAR2P16474 682 aaKnown RBP19.45■□□□□ 0.7
SCR1SCR1 LYS4P49367 693 aaPredicted RBP19.45■□□□□ 0.7
SCR1SCR1 HIM1Q06674 414 aa19.45■□□□□ 0.7
SCR1SCR1 FRK1Q03002 865 aaPredicted RBP19.43■□□□□ 0.7
SCR1SCR1 ADE16P54113 591 aaKnown RBP19.41■□□□□ 0.7
SCR1SCR1 RPO41P13433 1351 aaKnown RBP19.4■□□□□ 0.7
SCR1SCR1 SSA2P10592 639 aaKnown RBP19.38■□□□□ 0.69
SCR1SCR1 ATG13Q06628 738 aa19.38■□□□□ 0.69
SCR1SCR1 SPT7P35177 1332 aa19.37■□□□□ 0.69
SCR1SCR1 CTH1P47976 325 aa19.31■□□□□ 0.68
SCR1SCR1 MSB4Q12317 492 aa19.31■□□□□ 0.68
SCR1SCR1 CTF4Q01454 927 aa19.3■□□□□ 0.68
SCR1SCR1 PAP2P53632 584 aaKnown RBP19.29■□□□□ 0.68
SCR1SCR1 INP54Q08227 384 aaKnown RBP19.29■□□□□ 0.68
SCR1SCR1 BDF1P35817 686 aa19.28■□□□□ 0.68
SCR1SCR1 BUB1P41695 1021 aaKnown RBP RIP-Chip data19.28■□□□□ 0.68not detected
SCR1SCR1 DSD1P53095 428 aa19.26■□□□□ 0.67
SCR1SCR1 OSM1P21375 501 aaKnown RBP19.25■□□□□ 0.67
SCR1SCR1 GRX1P25373 110 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms