RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 NAP1P25293 417 aaKnown RBP13.27□□□□□ -0.29
RDN18-1RDN18-1 MRX12P47084 519 aa13.26□□□□□ -0.29
RDN18-1RDN18-1 CFT1Q06632 1357 aaKnown RBP13.25□□□□□ -0.29
RDN18-1RDN18-1 RIA1P53893 1110 aa13.25□□□□□ -0.29
RDN18-1RDN18-1 RCM1P53972 490 aa13.23□□□□□ -0.29
RDN18-1RDN18-1 PPH3P32345 308 aa13.23□□□□□ -0.29
RDN18-1RDN18-1 FUN12P39730 1002 aaKnown RBP13.2□□□□□ -0.3
RDN18-1RDN18-1 MAK10Q02197 733 aa13.2□□□□□ -0.3
RDN18-1RDN18-1 SNF2P22082 1703 aa13.19□□□□□ -0.3
RDN18-1RDN18-1 PSK1P31374 1356 aa13.18□□□□□ -0.3
RDN18-1RDN18-1 YDL144CQ07589 356 aa13.16□□□□□ -0.3
RDN18-1RDN18-1 VPS27P40343 622 aaKnown RBP13.16□□□□□ -0.3
RDN18-1RDN18-1 USO1P25386 1790 aa13.15□□□□□ -0.3
RDN18-1RDN18-1 RPP0P05317 312 aaKnown RBP13.14□□□□□ -0.31
RDN18-1RDN18-1 CDC45Q08032 650 aa13.14□□□□□ -0.31
RDN18-1RDN18-1 RVB2Q12464 471 aaKnown RBP13.14□□□□□ -0.31
RDN18-1RDN18-1 IOC4Q04213 475 aa13.13□□□□□ -0.31
RDN18-1RDN18-1 RRP46P53256 223 aaPredicted RBP13.13□□□□□ -0.31
RDN18-1RDN18-1 YNR029CP53729 429 aaKnown RBP13.11□□□□□ -0.31
RDN18-1RDN18-1 ABP1P15891 592 aaKnown RBP13.11□□□□□ -0.31
RDN18-1RDN18-1 MPP10P47083 593 aaKnown RBP13.11□□□□□ -0.31
RDN18-1RDN18-1 CPS1P27614 576 aa13.1□□□□□ -0.31
RDN18-1RDN18-1 SUI2P20459 304 aaKnown RBP13.09□□□□□ -0.31
RDN18-1RDN18-1 TY1B-NL2Q99337 1749 aaKnown RBP13.08□□□□□ -0.32
RDN18-1RDN18-1 AUS1Q08409 1394 aa13.07□□□□□ -0.32
RDN18-1RDN18-1 HIM1Q06674 414 aa13.06□□□□□ -0.32
RDN18-1RDN18-1 LEU2P04173 364 aaPredicted RBP13.06□□□□□ -0.32
RDN18-1RDN18-1 KAR2P16474 682 aaKnown RBP13.04□□□□□ -0.32
RDN18-1RDN18-1 TAP42Q04372 366 aa13.04□□□□□ -0.32
RDN18-1RDN18-1 PDI1P17967 522 aaKnown RBP13.02□□□□□ -0.32
RDN18-1RDN18-1 RTR1P40084 226 aaPredicted RBP13.02□□□□□ -0.32
RDN18-1RDN18-1 MTR4P47047 1073 aaKnown RBP13□□□□□ -0.33
RDN18-1RDN18-1 SAP155P43612 1002 aa12.98□□□□□ -0.33
RDN18-1RDN18-1 TY4B-HP0C2J7 1802 aa12.98□□□□□ -0.33
RDN18-1RDN18-1 TY4B-JP47024 1803 aa12.98□□□□□ -0.33
RDN18-1RDN18-1 THI22Q06490 572 aa12.97□□□□□ -0.33
RDN18-1RDN18-1 ADE6P38972 1358 aaKnown RBP12.97□□□□□ -0.33
RDN18-1RDN18-1 RPS24AP0CX31 135 aaKnown RBP12.96□□□□□ -0.33
RDN18-1RDN18-1 RPS24BP0CX32 135 aaKnown RBP12.96□□□□□ -0.33
RDN18-1RDN18-1 PRD1P25375 712 aa12.96□□□□□ -0.33
RDN18-1RDN18-1 PAP2P53632 584 aaKnown RBP12.96□□□□□ -0.33
RDN18-1RDN18-1 GRX4P32642 244 aa12.95□□□□□ -0.34
RDN18-1RDN18-1 RTF1P53064 558 aa12.95□□□□□ -0.34
RDN18-1RDN18-1 YRB30P53107 440 aaPredicted RBP12.95□□□□□ -0.34
RDN18-1RDN18-1 YIL177CP40434 1758 aa12.94□□□□□ -0.34
RDN18-1RDN18-1 YJL225CP40889 1758 aa12.94□□□□□ -0.34
RDN18-1RDN18-1 CSE4P36012 229 aa12.93□□□□□ -0.34
RDN18-1RDN18-1 NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.93□□□□□ -0.34not detected
RDN18-1RDN18-1 GAS4Q08271 471 aa12.93□□□□□ -0.34
RDN18-1RDN18-1 TPD3P31383 635 aa12.92□□□□□ -0.34
RDN18-1RDN18-1 TFA1P36100 482 aa12.92□□□□□ -0.34
RDN18-1RDN18-1 PRP43P53131 767 aaKnown RBP12.92□□□□□ -0.34
RDN18-1RDN18-1 HEF3P53978 1044 aaKnown RBP12.92□□□□□ -0.34
RDN18-1RDN18-1 RRP5Q05022 1729 aaKnown RBP12.89□□□□□ -0.35
RDN18-1RDN18-1 RTT109Q07794 436 aa12.88□□□□□ -0.35
RDN18-1RDN18-1 RPO41P13433 1351 aaKnown RBP12.88□□□□□ -0.35
RDN18-1RDN18-1 DPS1P04802 557 aaKnown RBP12.88□□□□□ -0.35
RDN18-1RDN18-1 APC1P53886 1748 aa12.86□□□□□ -0.35
RDN18-1RDN18-1 RPC31P17890 251 aa12.85□□□□□ -0.35
RDN18-1RDN18-1 FPR3P38911 411 aaKnown RBP12.85□□□□□ -0.35
RDN18-1RDN18-1 BUB1P41695 1021 aaKnown RBP RIP-Chip data12.85□□□□□ -0.35not detected
RDN18-1RDN18-1 THI12P42883 340 aa12.85□□□□□ -0.35
RDN18-1RDN18-1 THI5P43534 340 aa12.85□□□□□ -0.35
RDN18-1RDN18-1 THI11P47183 340 aa12.85□□□□□ -0.35
RDN18-1RDN18-1 THI13Q07748 340 aa12.85□□□□□ -0.35
RDN18-1RDN18-1 YRF1-2P40105 1681 aa12.84□□□□□ -0.35
RDN18-1RDN18-1 YIL092WP40497 633 aa12.84□□□□□ -0.35
RDN18-1RDN18-1 YMR196WQ04336 1088 aa12.84□□□□□ -0.35
RDN18-1RDN18-1 DAL5P15365 543 aa12.83□□□□□ -0.35
RDN18-1RDN18-1 YRF1-4O13559 1382 aa12.82□□□□□ -0.36
RDN18-1RDN18-1 RAD2P07276 1031 aa12.81□□□□□ -0.36
RDN18-1RDN18-1 AKL1P38080 1108 aaKnown RBP12.8□□□□□ -0.36
RDN18-1RDN18-1 SIR4P11978 1358 aa12.79□□□□□ -0.36
RDN18-1RDN18-1 URB1P34241 1764 aaKnown RBP12.78□□□□□ -0.36
RDN18-1RDN18-1 DSD1P53095 428 aa12.76□□□□□ -0.37
RDN18-1RDN18-1 FKS3Q04952 1785 aa12.76□□□□□ -0.37
RDN18-1RDN18-1 POL32P47110 350 aa12.75□□□□□ -0.37
RDN18-1RDN18-1 BUD27P43573 796 aaKnown RBP RIP-Chip data12.72□□□□□ -0.37not detected
RDN18-1RDN18-1 YNL050CP53952 270 aa12.71□□□□□ -0.38
RDN18-1RDN18-1 MAK21Q12176 1025 aaKnown RBP12.71□□□□□ -0.38
RDN18-1RDN18-1 NTH2P35172 780 aa12.7□□□□□ -0.38
RDN18-1RDN18-1 RRT14P40470 206 aa12.69□□□□□ -0.38
RDN18-1RDN18-1 OPY1P38271 328 aa12.69□□□□□ -0.38
RDN18-1RDN18-1 GYP7P48365 746 aa12.68□□□□□ -0.38
RDN18-1RDN18-1 PUF6Q04373 656 aaKnown RBP12.67□□□□□ -0.38
RDN18-1RDN18-1 PRP5P21372 849 aaPredicted RBP12.67□□□□□ -0.38
RDN18-1RDN18-1 MSB3P48566 633 aaPredicted RBP12.67□□□□□ -0.38
RDN18-1RDN18-1 PRP45P28004 379 aaPredicted RBP12.66□□□□□ -0.38
RDN18-1RDN18-1 HSP104P31539 908 aaKnown RBP12.66□□□□□ -0.38
RDN18-1RDN18-1 YBR287WP38355 427 aa12.65□□□□□ -0.38
RDN18-1RDN18-1 ZDS1P50111 915 aaKnown RBP12.65□□□□□ -0.38
RDN18-1RDN18-1 SLM3Q12093 417 aa12.65□□□□□ -0.38
RDN18-1RDN18-1 SRT1Q03175 343 aa12.65□□□□□ -0.39
RDN18-1RDN18-1 TRP5P00931 707 aaKnown RBP12.64□□□□□ -0.39
RDN18-1RDN18-1 IME2P32581 645 aa12.63□□□□□ -0.39
RDN18-1RDN18-1 ILV3P39522 585 aaKnown RBP12.63□□□□□ -0.39
RDN18-1RDN18-1 MAM1P40065 302 aa12.62□□□□□ -0.39
RDN18-1RDN18-1 PTP3P40048 928 aa12.6□□□□□ -0.39
RDN18-1RDN18-1 BMS1Q08965 1183 aaKnown RBP12.6□□□□□ -0.39
RDN18-1RDN18-1 YFR016CP43597 1233 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms