RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 RTF1P53064 558 aa14.12□□□□□ -0.15
NME1NME1 SLY41P22215 453 aa14.11□□□□□ -0.15
NME1NME1 YNL115CP53925 644 aa14.1□□□□□ -0.15
NME1NME1 BIO2P32451 375 aa14.07□□□□□ -0.16
NME1NME1 TIF1P10081 395 aaKnown RBP14.06□□□□□ -0.16
NME1NME1 NUD1P32336 851 aa14.06□□□□□ -0.16
NME1NME1 LAM6Q08001 693 aa14.05□□□□□ -0.16
NME1NME1 NPL4P33755 580 aa14.02□□□□□ -0.17
NME1NME1 HAP5Q02516 242 aa14.01□□□□□ -0.17
NME1NME1 KEX2P13134 814 aa14□□□□□ -0.17
NME1NME1 YNL108CP53929 270 aa13.99□□□□□ -0.17
NME1NME1 ERG12P07277 443 aa13.98□□□□□ -0.17
NME1NME1 RSC30P38781 883 aa13.98□□□□□ -0.17
NME1NME1 SPT5P27692 1063 aaKnown RBP13.97□□□□□ -0.17
NME1NME1 PDR1P12383 1068 aa13.96□□□□□ -0.17
NME1NME1 RTG2P32608 588 aaKnown RBP13.96□□□□□ -0.17
NME1NME1 FKH1P40466 484 aa13.96□□□□□ -0.17
NME1NME1 ARH1P48360 493 aa13.96□□□□□ -0.17
NME1NME1 YPR204WQ08995 1032 aa13.96□□□□□ -0.17
NME1NME1 TRM1P15565 570 aaKnown RBP13.95□□□□□ -0.18
NME1NME1 SAP30P38429 201 aa13.95□□□□□ -0.18
NME1NME1 BUB1P41695 1021 aaKnown RBP RIP-Chip data13.95□□□□□ -0.18not detected
NME1NME1 MAK16P10962 306 aaPredicted RBP13.94□□□□□ -0.18
NME1NME1 SSA4P22202 642 aaKnown RBP13.94□□□□□ -0.18
NME1NME1 PUS6P53294 404 aa13.94□□□□□ -0.18
NME1NME1 SUB2Q07478 446 aaKnown RBP13.94□□□□□ -0.18
NME1NME1 ERF2Q06551 359 aa13.92□□□□□ -0.18
NME1NME1 BUD31P25337 157 aaPredicted RBP13.91□□□□□ -0.18
NME1NME1 TBF1Q02457 562 aa13.91□□□□□ -0.18
NME1NME1 SSA1P10591 642 aaKnown RBP13.9□□□□□ -0.18
NME1NME1 SUP45P12385 437 aaKnown RBP13.9□□□□□ -0.18
NME1NME1 ISM1P48526 1002 aa13.89□□□□□ -0.19
NME1NME1 STR2P47164 639 aa13.88□□□□□ -0.19
NME1NME1 BNI4P53858 892 aa13.87□□□□□ -0.19
NME1NME1 ELP4Q02884 456 aaKnown RBP13.86□□□□□ -0.19
NME1NME1 YDJ1P25491 409 aaKnown RBP13.85□□□□□ -0.19
NME1NME1 GCD11P32481 527 aaKnown RBP13.84□□□□□ -0.19
NME1NME1 CPS1P27614 576 aa13.83□□□□□ -0.2
NME1NME1 ENO2P00925 437 aaKnown RBP13.82□□□□□ -0.2
NME1NME1 TTI1P36097 1038 aa13.82□□□□□ -0.2
NME1NME1 GEF1P37020 779 aa13.81□□□□□ -0.2
NME1NME1 NAF1P53919 492 aaKnown RBP13.81□□□□□ -0.2
NME1NME1 YDR344CQ05510 147 aa13.81□□□□□ -0.2
NME1NME1 SPT23P35210 1082 aa13.8□□□□□ -0.2
NME1NME1 AIR2Q12476 344 aaKnown RBP13.79□□□□□ -0.2
NME1NME1 PTC2P39966 464 aaKnown RBP13.78□□□□□ -0.2
NME1NME1 RAM1P22007 431 aa13.77□□□□□ -0.21
NME1NME1 SIS2P36024 562 aa13.77□□□□□ -0.21
NME1NME1 YPP1P46951 817 aa13.77□□□□□ -0.21
NME1NME1 TUB4P53378 473 aa13.77□□□□□ -0.21
NME1NME1 YDL206WQ12424 762 aa13.77□□□□□ -0.21
NME1NME1 ENO1P00924 437 aaKnown RBP13.76□□□□□ -0.21
NME1NME1 TY1A-DR4O74302 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-HP0C2I4 478 aaKnown RBP13.75□□□□□ -0.21
NME1NME1 TY1A-AP0CX57 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-PR1P0CX58 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-ORP0CX59 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-PR2P0CX60 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-DR5P0CX65 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-ER2P0CX66 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-GR3P0CX67 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-LR1P0CX68 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-MR2P0CX69 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-JR2P47099 440 aa13.75□□□□□ -0.21
NME1NME1 RIM21P48565 533 aa13.75□□□□□ -0.21
NME1NME1 TY1A-DR1Q03856 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-ML1Q04706 440 aaKnown RBP13.75□□□□□ -0.21
NME1NME1 BUD20Q08004 166 aaPredicted RBP13.75□□□□□ -0.21
NME1NME1 TY1A-BRQ12217 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-NL2Q12470 440 aa13.75□□□□□ -0.21
NME1NME1 TY1A-GR2Q12485 440 aa13.75□□□□□ -0.21
NME1NME1 AGE1Q04412 482 aa13.74□□□□□ -0.21
NME1NME1 SEC2P17065 759 aa13.73□□□□□ -0.21
NME1NME1 MRX10Q05648 414 aa13.72□□□□□ -0.21
NME1NME1 RPA14P50106 137 aa13.71□□□□□ -0.21
NME1NME1 MCM16Q12262 181 aa13.69□□□□□ -0.22
NME1NME1 PRT1P06103 763 aaKnown RBP13.68□□□□□ -0.22
NME1NME1 ALR1Q08269 859 aa13.68□□□□□ -0.22
NME1NME1 BMT6Q12291 365 aa13.67□□□□□ -0.22
NME1NME1 PAT1P25644 796 aaKnown RBP13.66□□□□□ -0.22
NME1NME1 PRE3P38624 215 aa13.65□□□□□ -0.22
NME1NME1 RPL34AP87262 121 aaPredicted RBP13.65□□□□□ -0.22
NME1NME1 YPR097WQ06839 1073 aa13.65□□□□□ -0.22
NME1NME1 YPR015CQ12531 247 aa13.65□□□□□ -0.22
NME1NME1 YJL171CP46992 396 aa13.64□□□□□ -0.23
NME1NME1 YML082WQ04533 649 aaKnown RBP13.64□□□□□ -0.23
NME1NME1 NOB1Q08444 459 aaKnown RBP13.64□□□□□ -0.23
NME1NME1 RRN7P40992 514 aa13.63□□□□□ -0.23
NME1NME1 KXD1P53158 218 aa13.62□□□□□ -0.23
NME1NME1 PAC1P39946 494 aaKnown RBP13.61□□□□□ -0.23
NME1NME1 TEC1P18412 486 aa13.59□□□□□ -0.23
NME1NME1 SLX8P40072 274 aa13.59□□□□□ -0.23
NME1NME1 PUP1P25043 261 aa13.58□□□□□ -0.24
NME1NME1 EMP47P43555 445 aa13.58□□□□□ -0.24
NME1NME1 PDC1P06169 563 aaKnown RBP13.57□□□□□ -0.24
NME1NME1 ISF1P32488 338 aa13.57□□□□□ -0.24
NME1NME1 SPT16P32558 1035 aaKnown RBP13.57□□□□□ -0.24
NME1NME1 TGL4P36165 910 aa13.57□□□□□ -0.24
NME1NME1 CHL1P22516 861 aaPredicted RBP13.56□□□□□ -0.24
NME1NME1 YML020WQ03722 664 aa13.56□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms