RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CASC19-261ENST00000641853 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CASC19-261ENST00000641853 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
CASC19-261ENST00000641853 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
CASC19-261ENST00000641853 KIF3CO14782 793 aa13.29□□□□□ -0.28
CASC19-261ENST00000641853 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
CASC19-261ENST00000641853 C2orf72A6NCS6 295 aa13.28□□□□□ -0.28
CASC19-261ENST00000641853 SCUBE2Q9NQ36 999 aa13.28□□□□□ -0.28
CASC19-261ENST00000641853 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.29
CASC19-261ENST00000641853 PDE4AP27815 886 aa13.25□□□□□ -0.29
CASC19-261ENST00000641853 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
CASC19-261ENST00000641853 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
CASC19-261ENST00000641853 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
CASC19-261ENST00000641853 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
CASC19-261ENST00000641853 DSG2Q14126 1118 aa13.22□□□□□ -0.29
CASC19-261ENST00000641853 MFSD10Q14728 455 aa13.22□□□□□ -0.29
CASC19-261ENST00000641853 FOXK1P85037 733 aa13.19□□□□□ -0.3
CASC19-261ENST00000641853 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
CASC19-261ENST00000641853 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
CASC19-261ENST00000641853 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
CASC19-261ENST00000641853 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
CASC19-261ENST00000641853 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
CASC19-261ENST00000641853 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
CASC19-261ENST00000641853 E2F4Q16254 413 aa13.06□□□□□ -0.32
CASC19-261ENST00000641853 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
CASC19-261ENST00000641853 KCNV2Q8TDN2 545 aa13.04□□□□□ -0.32
CASC19-261ENST00000641853 SLC34A2O95436 690 aa13□□□□□ -0.33
CASC19-261ENST00000641853 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
CASC19-261ENST00000641853 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASC19-261ENST00000641853 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
CASC19-261ENST00000641853 PTCD2Q8WV60 388 aaKnown RBP12.97□□□□□ -0.33
CASC19-261ENST00000641853 SNPHO15079 494 aa12.95□□□□□ -0.34
CASC19-261ENST00000641853 DPYSL4O14531 572 aa12.94□□□□□ -0.34
CASC19-261ENST00000641853 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
CASC19-261ENST00000641853 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
CASC19-261ENST00000641853 KHSRPQ92945 711 aaKnown RBP eCLIP12.92□□□□□ -0.34
CASC19-261ENST00000641853 ARIH1Q9Y4X5 557 aaPredicted RBP12.92□□□□□ -0.34
CASC19-261ENST00000641853 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
CASC19-261ENST00000641853 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
CASC19-261ENST00000641853 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
CASC19-261ENST00000641853 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
CASC19-261ENST00000641853 ST18O60284 1047 aa12.88□□□□□ -0.35
CASC19-261ENST00000641853 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
CASC19-261ENST00000641853 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
CASC19-261ENST00000641853 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
CASC19-261ENST00000641853 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
CASC19-261ENST00000641853 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
CASC19-261ENST00000641853 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
CASC19-261ENST00000641853 TBC1D12O60347 775 aa12.84□□□□□ -0.35
CASC19-261ENST00000641853 NUDT7P0C024 238 aa12.84□□□□□ -0.35
CASC19-261ENST00000641853 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
CASC19-261ENST00000641853 PDIA6Q15084 440 aa12.84□□□□□ -0.35
CASC19-261ENST00000641853 EVI5O60447 810 aa12.83□□□□□ -0.36
CASC19-261ENST00000641853 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
CASC19-261ENST00000641853 SEMA3EO15041 775 aa12.78□□□□□ -0.36
CASC19-261ENST00000641853 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
CASC19-261ENST00000641853 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.36
CASC19-261ENST00000641853 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
CASC19-261ENST00000641853 MLLT3P42568 568 aaPredicted RBP12.73□□□□□ -0.37
CASC19-261ENST00000641853 PTGER2P43116 358 aa12.71□□□□□ -0.37
CASC19-261ENST00000641853 DDX12PQ92771 950 aa12.71□□□□□ -0.37
CASC19-261ENST00000641853 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
CASC19-261ENST00000641853 EMP3P54852 163 aa12.7□□□□□ -0.38
CASC19-261ENST00000641853 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
CASC19-261ENST00000641853 NBR1Q14596 966 aa12.7□□□□□ -0.38
CASC19-261ENST00000641853 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
CASC19-261ENST00000641853 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
CASC19-261ENST00000641853 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
CASC19-261ENST00000641853 FOSBP53539 338 aa12.66□□□□□ -0.38
CASC19-261ENST00000641853 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
CASC19-261ENST00000641853 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
CASC19-261ENST00000641853 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
CASC19-261ENST00000641853 BCANQ96GW7 911 aa12.65□□□□□ -0.38
CASC19-261ENST00000641853 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
CASC19-261ENST00000641853 ERBB3P21860 1342 aa12.65□□□□□ -0.38
CASC19-261ENST00000641853 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
CASC19-261ENST00000641853 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
CASC19-261ENST00000641853 PHF14O94880 888 aa12.62□□□□□ -0.39
CASC19-261ENST00000641853 OSBPP22059 807 aa12.62□□□□□ -0.39
CASC19-261ENST00000641853 HS3ST6Q96QI5 342 aa12.61□□□□□ -0.39
CASC19-261ENST00000641853 TYW1BQ6NUM6 668 aa12.58□□□□□ -0.4
CASC19-261ENST00000641853 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
CASC19-261ENST00000641853 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
CASC19-261ENST00000641853 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
CASC19-261ENST00000641853 EPAS1Q99814 870 aa12.57□□□□□ -0.4
CASC19-261ENST00000641853 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
CASC19-261ENST00000641853 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
CASC19-261ENST00000641853 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
CASC19-261ENST00000641853 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
CASC19-261ENST00000641853 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
CASC19-261ENST00000641853 POTEMA6NI47 508 aa12.54□□□□□ -0.4
CASC19-261ENST00000641853 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
CASC19-261ENST00000641853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASC19-261ENST00000641853 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
CASC19-261ENST00000641853 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.4
CASC19-261ENST00000641853 TSR1Q2NL82 804 aaKnown RBP12.51□□□□□ -0.41
CASC19-261ENST00000641853 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
CASC19-261ENST00000641853 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
CASC19-261ENST00000641853 MAP3K7O43318 606 aa12.5□□□□□ -0.41
CASC19-261ENST00000641853 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms