RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
PHGDH-219ENST00000641513 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
PHGDH-219ENST00000641513 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
PHGDH-219ENST00000641513 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
PHGDH-219ENST00000641513 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
PHGDH-219ENST00000641513 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
PHGDH-219ENST00000641513 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
PHGDH-219ENST00000641513 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
PHGDH-219ENST00000641513 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
PHGDH-219ENST00000641513 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
PHGDH-219ENST00000641513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■■■■■ 38.2
PHGDH-219ENST00000641513 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
PHGDH-219ENST00000641513 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
PHGDH-219ENST00000641513 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
PHGDH-219ENST00000641513 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-219ENST00000641513 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.31
PHGDH-219ENST00000641513 DAPK1P53355 1430 aa13.08□□□□□ -0.32
PHGDH-219ENST00000641513 WDR7Q9Y4E6 1490 aa13.06□□□□□ -0.32
PHGDH-219ENST00000641513 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
PHGDH-219ENST00000641513 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
PHGDH-219ENST00000641513 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
PHGDH-219ENST00000641513 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
PHGDH-219ENST00000641513 ABCC5O15440 1437 aa13.05□□□□□ -0.32
PHGDH-219ENST00000641513 NAIPQ13075 1403 aa13.03□□□□□ -0.32
PHGDH-219ENST00000641513 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
PHGDH-219ENST00000641513 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.33
PHGDH-219ENST00000641513 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
PHGDH-219ENST00000641513 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
PHGDH-219ENST00000641513 KDM6BO15054 1643 aa13□□□□□ -0.33
PHGDH-219ENST00000641513 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
PHGDH-219ENST00000641513 AKNAQ7Z591 1439 aa13□□□□□ -0.33
PHGDH-219ENST00000641513 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
PHGDH-219ENST00000641513 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.334e-8■■■□□ 17.4
PHGDH-219ENST00000641513 PLCH2O75038 1416 aa12.98□□□□□ -0.33
PHGDH-219ENST00000641513 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 EFCAB2Q5VUJ9 269 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
PHGDH-219ENST00000641513 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
PHGDH-219ENST00000641513 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.33
PHGDH-219ENST00000641513 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
PHGDH-219ENST00000641513 ABCC1P33527 1531 aa12.95□□□□□ -0.34
PHGDH-219ENST00000641513 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
PHGDH-219ENST00000641513 ADGRL2O95490 1459 aa12.95□□□□□ -0.34
PHGDH-219ENST00000641513 MBD5Q9P267 1494 aa12.94□□□□□ -0.34
PHGDH-219ENST00000641513 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
PHGDH-219ENST00000641513 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
PHGDH-219ENST00000641513 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
PHGDH-219ENST00000641513 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
PHGDH-219ENST00000641513 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
PHGDH-219ENST00000641513 FANCAO15360 1455 aa12.92□□□□□ -0.34
PHGDH-219ENST00000641513 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
PHGDH-219ENST00000641513 KIAA1107Q9UPP5 1409 aa12.91□□□□□ -0.34
PHGDH-219ENST00000641513 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
PHGDH-219ENST00000641513 CD109Q6YHK3 1445 aa12.89□□□□□ -0.35
PHGDH-219ENST00000641513 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
PHGDH-219ENST00000641513 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
PHGDH-219ENST00000641513 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
PHGDH-219ENST00000641513 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
PHGDH-219ENST00000641513 ADGRL1O94910 1474 aa12.88□□□□□ -0.35
PHGDH-219ENST00000641513 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
PHGDH-219ENST00000641513 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
PHGDH-219ENST00000641513 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
PHGDH-219ENST00000641513 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
PHGDH-219ENST00000641513 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
PHGDH-219ENST00000641513 MPHOSPH9Q99550 1183 aa12.84□□□□□ -0.35
PHGDH-219ENST00000641513 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
PHGDH-219ENST00000641513 GLI2P10070 1586 aa12.84□□□□□ -0.35
PHGDH-219ENST00000641513 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
PHGDH-219ENST00000641513 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
PHGDH-219ENST00000641513 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
PHGDH-219ENST00000641513 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
PHGDH-219ENST00000641513 INO80Q9ULG1 1556 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-219ENST00000641513 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
PHGDH-219ENST00000641513 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
PHGDH-219ENST00000641513 ATP7AQ04656 1500 aa12.82□□□□□ -0.36
PHGDH-219ENST00000641513 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
PHGDH-219ENST00000641513 PZPP20742 1482 aa12.8□□□□□ -0.36
PHGDH-219ENST00000641513 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
PHGDH-219ENST00000641513 UNC13BO14795 1591 aa12.8□□□□□ -0.36
PHGDH-219ENST00000641513 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
PHGDH-219ENST00000641513 NUP155O75694 1391 aa12.79□□□□□ -0.36
PHGDH-219ENST00000641513 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
PHGDH-219ENST00000641513 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-219ENST00000641513 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
PHGDH-219ENST00000641513 NEO1Q92859 1461 aa12.78□□□□□ -0.36
PHGDH-219ENST00000641513 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
PHGDH-219ENST00000641513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHGDH-219ENST00000641513 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
PHGDH-219ENST00000641513 KDM5DQ9BY66 1539 aa12.77□□□□□ -0.37
PHGDH-219ENST00000641513 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
PHGDH-219ENST00000641513 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
PHGDH-219ENST00000641513 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
PHGDH-219ENST00000641513 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
PHGDH-219ENST00000641513 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
PHGDH-219ENST00000641513 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
PHGDH-219ENST00000641513 KDM5CP41229 1560 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms