RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-288ENST00000640773 KDM5CP41229 1560 aa13.18□□□□□ -0.3
KCNMA1-288ENST00000640773 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
KCNMA1-288ENST00000640773 PLCH2O75038 1416 aa13.18□□□□□ -0.3
KCNMA1-288ENST00000640773 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
KCNMA1-288ENST00000640773 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
KCNMA1-288ENST00000640773 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-288ENST00000640773 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
KCNMA1-288ENST00000640773 SIGLEC1Q9BZZ2 1709 aa13.16□□□□□ -0.3
KCNMA1-288ENST00000640773 ABCC1P33527 1531 aa13.15□□□□□ -0.3
KCNMA1-288ENST00000640773 KDM6BO15054 1643 aa13.15□□□□□ -0.3
KCNMA1-288ENST00000640773 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
KCNMA1-288ENST00000640773 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-288ENST00000640773 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
KCNMA1-288ENST00000640773 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-288ENST00000640773 CROCC2H7BZ55 1655 aa13.13□□□□□ -0.31
KCNMA1-288ENST00000640773 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
KCNMA1-288ENST00000640773 REREQ9P2R6 1566 aa13.12□□□□□ -0.31
KCNMA1-288ENST00000640773 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
KCNMA1-288ENST00000640773 FAM69CQ0P6D2 419 aa13.1□□□□□ -0.31
KCNMA1-288ENST00000640773 INO80Q9ULG1 1556 aaPredicted RBP13.1□□□□□ -0.31
KCNMA1-288ENST00000640773 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
KCNMA1-288ENST00000640773 KIDINS220Q9ULH0 1771 aa13.09□□□□□ -0.31
KCNMA1-288ENST00000640773 MAST1Q9Y2H9 1570 aa13.08□□□□□ -0.32
KCNMA1-288ENST00000640773 FANCAO15360 1455 aa13.08□□□□□ -0.32
KCNMA1-288ENST00000640773 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-288ENST00000640773 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
KCNMA1-288ENST00000640773 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
KCNMA1-288ENST00000640773 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
KCNMA1-288ENST00000640773 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
KCNMA1-288ENST00000640773 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
KCNMA1-288ENST00000640773 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
KCNMA1-288ENST00000640773 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
KCNMA1-288ENST00000640773 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
KCNMA1-288ENST00000640773 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
KCNMA1-288ENST00000640773 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
KCNMA1-288ENST00000640773 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
KCNMA1-288ENST00000640773 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
KCNMA1-288ENST00000640773 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.32
KCNMA1-288ENST00000640773 MIA2Q96PC5 1412 aa13.02□□□□□ -0.33
KCNMA1-288ENST00000640773 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
KCNMA1-288ENST00000640773 DIP2CQ9Y2E4 1556 aa13.01□□□□□ -0.33
KCNMA1-288ENST00000640773 ADAMTSL3P82987 1691 aa13□□□□□ -0.33
KCNMA1-288ENST00000640773 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
KCNMA1-288ENST00000640773 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
KCNMA1-288ENST00000640773 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
KCNMA1-288ENST00000640773 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
KCNMA1-288ENST00000640773 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
KCNMA1-288ENST00000640773 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-288ENST00000640773 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
KCNMA1-288ENST00000640773 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
KCNMA1-288ENST00000640773 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
KCNMA1-288ENST00000640773 PLEKHH2Q8IVE3 1493 aa12.98□□□□□ -0.33
KCNMA1-288ENST00000640773 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
KCNMA1-288ENST00000640773 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
KCNMA1-288ENST00000640773 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
KCNMA1-288ENST00000640773 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.33
KCNMA1-288ENST00000640773 AGLP35573 1532 aa12.96□□□□□ -0.34
KCNMA1-288ENST00000640773 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
KCNMA1-288ENST00000640773 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
KCNMA1-288ENST00000640773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.95□□□□□ -0.34
KCNMA1-288ENST00000640773 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
KCNMA1-288ENST00000640773 DEPDC5O75140 1603 aa12.94□□□□□ -0.34
KCNMA1-288ENST00000640773 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-288ENST00000640773 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
KCNMA1-288ENST00000640773 MTUS2Q5JR59 1369 aa12.93□□□□□ -0.34
KCNMA1-288ENST00000640773 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
KCNMA1-288ENST00000640773 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
KCNMA1-288ENST00000640773 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
KCNMA1-288ENST00000640773 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
KCNMA1-288ENST00000640773 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
KCNMA1-288ENST00000640773 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
KCNMA1-288ENST00000640773 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-288ENST00000640773 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
KCNMA1-288ENST00000640773 ADGRL2O95490 1459 aa12.9□□□□□ -0.34
KCNMA1-288ENST00000640773 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
KCNMA1-288ENST00000640773 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
KCNMA1-288ENST00000640773 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
KCNMA1-288ENST00000640773 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
KCNMA1-288ENST00000640773 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-288ENST00000640773 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
KCNMA1-288ENST00000640773 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
KCNMA1-288ENST00000640773 ATP10AO60312 1499 aa12.86□□□□□ -0.35
KCNMA1-288ENST00000640773 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
KCNMA1-288ENST00000640773 SUPT16HQ9Y5B9 1047 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-288ENST00000640773 ABCC5O15440 1437 aa12.85□□□□□ -0.35
KCNMA1-288ENST00000640773 GCC2Q8IWJ2 1684 aa12.84□□□□□ -0.35
KCNMA1-288ENST00000640773 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
KCNMA1-288ENST00000640773 C9orf84Q5VXU9 1444 aa12.84□□□□□ -0.35
KCNMA1-288ENST00000640773 ZC3H13Q5T200 1668 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-288ENST00000640773 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.35
KCNMA1-288ENST00000640773 DAPK1P53355 1430 aa12.83□□□□□ -0.36
KCNMA1-288ENST00000640773 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.36
KCNMA1-288ENST00000640773 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 UNC13BO14795 1591 aa12.81□□□□□ -0.36
KCNMA1-288ENST00000640773 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms