RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 POGZQ7Z3K3 1410 aa25.28■■□□□ 1.64
SPIN3-240ENST00000640507 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
SPIN3-240ENST00000640507 ZMYM4Q5VZL5 1548 aa25.27■■□□□ 1.64
SPIN3-240ENST00000640507 ARID4BQ4LE39 1312 aaPredicted RBP25.24■■□□□ 1.63
SPIN3-240ENST00000640507 MTUS2Q5JR59 1369 aa25.23■■□□□ 1.63
SPIN3-240ENST00000640507 YEATS2Q9ULM3 1422 aa25.23■■□□□ 1.63
SPIN3-240ENST00000640507 ARHGEF40Q8TER5 1519 aa25.22■■□□□ 1.63
SPIN3-240ENST00000640507 AFAP1Q8N556 730 aa25.22■■□□□ 1.63
SPIN3-240ENST00000640507 CDC42BPBQ9Y5S2 1711 aa25.21■■□□□ 1.63
SPIN3-240ENST00000640507 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
SPIN3-240ENST00000640507 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.62
SPIN3-240ENST00000640507 PREX2Q70Z35 1606 aa25.2■■□□□ 1.62
SPIN3-240ENST00000640507 GPATCH8Q9UKJ3 1502 aaKnown RBP25.18■■□□□ 1.62
SPIN3-240ENST00000640507 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
SPIN3-240ENST00000640507 ZNF777Q9ULD5 760 aaPredicted RBP25.14■■□□□ 1.62
SPIN3-240ENST00000640507 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.61
SPIN3-240ENST00000640507 ARHGEF12Q9NZN5 1544 aa25.13■■□□□ 1.61
SPIN3-240ENST00000640507 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
SPIN3-240ENST00000640507 ADAMTSL3P82987 1691 aa25.13■■□□□ 1.61
SPIN3-240ENST00000640507 CDC42BPAQ5VT25 1732 aa25.13■■□□□ 1.61
SPIN3-240ENST00000640507 ATP10AO60312 1499 aa25.13■■□□□ 1.61
SPIN3-240ENST00000640507 KDM5CP41229 1560 aa25.13■■□□□ 1.61
SPIN3-240ENST00000640507 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
SPIN3-240ENST00000640507 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
SPIN3-240ENST00000640507 TRAPPC8Q9Y2L5 1435 aa25.11■■□□□ 1.61
SPIN3-240ENST00000640507 ABCC1P33527 1531 aa25.11■■□□□ 1.61
SPIN3-240ENST00000640507 EHBP1L1Q8N3D4 1523 aa25.1■■□□□ 1.61
SPIN3-240ENST00000640507 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
SPIN3-240ENST00000640507 PTPRMP28827 1452 aa25.08■■□□□ 1.61
SPIN3-240ENST00000640507 C9orf84Q5VXU9 1444 aa25.08■■□□□ 1.61
SPIN3-240ENST00000640507 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
SPIN3-240ENST00000640507 KIAA1107Q9UPP5 1409 aa25.06■■□□□ 1.6
SPIN3-240ENST00000640507 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
SPIN3-240ENST00000640507 MLECQ14165 292 aa25.04■■□□□ 1.6
SPIN3-240ENST00000640507 HECW2Q9P2P5 1572 aa25.04■■□□□ 1.6
SPIN3-240ENST00000640507 ITSN2Q9NZM3 1697 aa25.03■■□□□ 1.6
SPIN3-240ENST00000640507 PLEKHH2Q8IVE3 1493 aa25.03■■□□□ 1.6
SPIN3-240ENST00000640507 SIGLEC1Q9BZZ2 1709 aa25.02■■□□□ 1.6
SPIN3-240ENST00000640507 MADDQ8WXG6 1647 aa25.02■■□□□ 1.6
SPIN3-240ENST00000640507 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
SPIN3-240ENST00000640507 SYCP2Q9BX26 1530 aa24.99■■□□□ 1.59
SPIN3-240ENST00000640507 ZNF644Q9H582 1327 aaPredicted RBP24.99■■□□□ 1.59
SPIN3-240ENST00000640507 DIP2CQ9Y2E4 1556 aa24.98■■□□□ 1.59
SPIN3-240ENST00000640507 NCOA2Q15596 1464 aa24.98■■□□□ 1.59
SPIN3-240ENST00000640507 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
SPIN3-240ENST00000640507 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
SPIN3-240ENST00000640507 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
SPIN3-240ENST00000640507 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
SPIN3-240ENST00000640507 SUPT6HQ7KZ85 1726 aaKnown RBP24.94■■□□□ 1.58
SPIN3-240ENST00000640507 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
SPIN3-240ENST00000640507 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
SPIN3-240ENST00000640507 KIDINS220Q9ULH0 1771 aa24.93■■□□□ 1.58
SPIN3-240ENST00000640507 RIMS1Q86UR5 1692 aaKnown RBP24.92■■□□□ 1.58
SPIN3-240ENST00000640507 MBD5Q9P267 1494 aa24.91■■□□□ 1.58
SPIN3-240ENST00000640507 AGLP35573 1532 aa24.9■■□□□ 1.58
SPIN3-240ENST00000640507 APLP2Q06481 763 aa24.89■■□□□ 1.58
SPIN3-240ENST00000640507 RSPH4AQ5TD94 716 aa24.88■■□□□ 1.57
SPIN3-240ENST00000640507 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
SPIN3-240ENST00000640507 ATP7AQ04656 1500 aa24.86■■□□□ 1.57
SPIN3-240ENST00000640507 FER1L4A9Z1Z3 1794 aa24.83■■□□□ 1.57
SPIN3-240ENST00000640507 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.56
SPIN3-240ENST00000640507 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
SPIN3-240ENST00000640507 INO80Q9ULG1 1556 aaPredicted RBP24.81■■□□□ 1.56
SPIN3-240ENST00000640507 CEBPAP49715 358 aaPredicted RBP24.81■■□□□ 1.56
SPIN3-240ENST00000640507 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
SPIN3-240ENST00000640507 A2MP01023 1474 aa24.8■■□□□ 1.56
SPIN3-240ENST00000640507 CCDC141Q6ZP82 1450 aa24.78■■□□□ 1.56
SPIN3-240ENST00000640507 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
SPIN3-240ENST00000640507 MIA2Q96PC5 1412 aa24.77■■□□□ 1.56
SPIN3-240ENST00000640507 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
SPIN3-240ENST00000640507 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
SPIN3-240ENST00000640507 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
SPIN3-240ENST00000640507 CNTLNQ9NXG0 1405 aa24.74■■□□□ 1.55
SPIN3-240ENST00000640507 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
SPIN3-240ENST00000640507 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
SPIN3-240ENST00000640507 ARHGEF5Q12774 1597 aa24.72■■□□□ 1.55
SPIN3-240ENST00000640507 GGT6Q6P531 493 aa24.7■■□□□ 1.55
SPIN3-240ENST00000640507 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.55
SPIN3-240ENST00000640507 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
SPIN3-240ENST00000640507 HSPA2P54652 639 aa24.69■■□□□ 1.54
SPIN3-240ENST00000640507 ZMYM3Q14202 1370 aa24.66■■□□□ 1.54
SPIN3-240ENST00000640507 KIF3BO15066 747 aa24.63■■□□□ 1.53
SPIN3-240ENST00000640507 C3P01024 1663 aa24.62■■□□□ 1.53
SPIN3-240ENST00000640507 UHRF1BP1Q6BDS2 1440 aa24.61■■□□□ 1.53
SPIN3-240ENST00000640507 SETD1BQ9UPS6 1966 aaKnown RBP24.6■■□□□ 1.53
SPIN3-240ENST00000640507 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
SPIN3-240ENST00000640507 MAST1Q9Y2H9 1570 aa24.58■■□□□ 1.53
SPIN3-240ENST00000640507 FGD6Q6ZV73 1430 aa24.58■■□□□ 1.52
SPIN3-240ENST00000640507 MROH2AA6NES4 1674 aa24.57■■□□□ 1.52
SPIN3-240ENST00000640507 NPATQ14207 1427 aa24.57■■□□□ 1.52
SPIN3-240ENST00000640507 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
SPIN3-240ENST00000640507 ABCC5O15440 1437 aa24.55■■□□□ 1.52
SPIN3-240ENST00000640507 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
SPIN3-240ENST00000640507 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
SPIN3-240ENST00000640507 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
SPIN3-240ENST00000640507 PTPRKQ15262 1439 aa24.51■■□□□ 1.51
SPIN3-240ENST00000640507 DAPK1P53355 1430 aa24.49■■□□□ 1.51
SPIN3-240ENST00000640507 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
SPIN3-240ENST00000640507 FAM135AQ9P2D6 1515 aa24.48■■□□□ 1.51
SPIN3-240ENST00000640507 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms