RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 ABCC5O15440 1437 aa13.3□□□□□ -0.28
NECAP1-225ENST00000640209 DAPK1P53355 1430 aa13.3□□□□□ -0.28
NECAP1-225ENST00000640209 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
NECAP1-225ENST00000640209 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
NECAP1-225ENST00000640209 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
NECAP1-225ENST00000640209 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
NECAP1-225ENST00000640209 SYNJ2O15056 1496 aa13.28□□□□□ -0.28
NECAP1-225ENST00000640209 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
NECAP1-225ENST00000640209 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
NECAP1-225ENST00000640209 ROCK1Q13464 1354 aa13.25□□□□□ -0.29
NECAP1-225ENST00000640209 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
NECAP1-225ENST00000640209 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
NECAP1-225ENST00000640209 NUP160Q12769 1436 aa13.24□□□□□ -0.29
NECAP1-225ENST00000640209 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
NECAP1-225ENST00000640209 KIF14Q15058 1648 aa13.23□□□□□ -0.29
NECAP1-225ENST00000640209 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
NECAP1-225ENST00000640209 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
NECAP1-225ENST00000640209 GPATCH8Q9UKJ3 1502 aaKnown RBP13.21□□□□□ -0.29
NECAP1-225ENST00000640209 ANP32CO43423 234 aa13.21□□□□□ -0.29
NECAP1-225ENST00000640209 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
NECAP1-225ENST00000640209 CAMSAP2Q08AD1 1489 aa13.21□□□□□ -0.29
NECAP1-225ENST00000640209 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
NECAP1-225ENST00000640209 CCER2I3L3R5 266 aa13.2□□□□□ -0.3
NECAP1-225ENST00000640209 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-225ENST00000640209 WASHC2AQ641Q2 1341 aa13.2□□□□□ -0.3
NECAP1-225ENST00000640209 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
NECAP1-225ENST00000640209 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
NECAP1-225ENST00000640209 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
NECAP1-225ENST00000640209 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
NECAP1-225ENST00000640209 PZPP20742 1482 aa13.17□□□□□ -0.3
NECAP1-225ENST00000640209 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
NECAP1-225ENST00000640209 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
NECAP1-225ENST00000640209 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
NECAP1-225ENST00000640209 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
NECAP1-225ENST00000640209 ABCA8O94911 1581 aa13.16□□□□□ -0.3
NECAP1-225ENST00000640209 ATP10BO94823 1461 aa13.15□□□□□ -0.3
NECAP1-225ENST00000640209 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
NECAP1-225ENST00000640209 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
NECAP1-225ENST00000640209 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
NECAP1-225ENST00000640209 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
NECAP1-225ENST00000640209 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
NECAP1-225ENST00000640209 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
NECAP1-225ENST00000640209 CDC42BPAQ5VT25 1732 aa13.11□□□□□ -0.31
NECAP1-225ENST00000640209 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
NECAP1-225ENST00000640209 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
NECAP1-225ENST00000640209 BCANQ96GW7 911 aa13.08□□□□□ -0.31
NECAP1-225ENST00000640209 CCDC7Q96M83 1385 aa13.08□□□□□ -0.32
NECAP1-225ENST00000640209 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.32
NECAP1-225ENST00000640209 PKD2Q13563 968 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 FKBP8Q14318 412 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
NECAP1-225ENST00000640209 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
NECAP1-225ENST00000640209 HNRNPMP52272 730 aaKnown RBP eCLIP13.06□□□□□ -0.32
NECAP1-225ENST00000640209 PTPRGP23470 1445 aa13.06□□□□□ -0.32
NECAP1-225ENST00000640209 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
NECAP1-225ENST00000640209 MBD5Q9P267 1494 aa13.05□□□□□ -0.32
NECAP1-225ENST00000640209 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
NECAP1-225ENST00000640209 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
NECAP1-225ENST00000640209 CHD1O14646 1710 aa13.02□□□□□ -0.32
NECAP1-225ENST00000640209 NUP155O75694 1391 aa13.02□□□□□ -0.32
NECAP1-225ENST00000640209 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
NECAP1-225ENST00000640209 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
NECAP1-225ENST00000640209 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
NECAP1-225ENST00000640209 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
NECAP1-225ENST00000640209 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
NECAP1-225ENST00000640209 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
NECAP1-225ENST00000640209 KIF15Q9NS87 1388 aa12.99□□□□□ -0.33
NECAP1-225ENST00000640209 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
NECAP1-225ENST00000640209 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
NECAP1-225ENST00000640209 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
NECAP1-225ENST00000640209 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
NECAP1-225ENST00000640209 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
NECAP1-225ENST00000640209 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
NECAP1-225ENST00000640209 USP47Q96K76 1375 aa12.96□□□□□ -0.33
NECAP1-225ENST00000640209 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.33
NECAP1-225ENST00000640209 PREX2Q70Z35 1606 aa12.96□□□□□ -0.33
NECAP1-225ENST00000640209 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
NECAP1-225ENST00000640209 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
NECAP1-225ENST00000640209 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
NECAP1-225ENST00000640209 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
NECAP1-225ENST00000640209 NEFLP07196 543 aa12.94□□□□□ -0.34
NECAP1-225ENST00000640209 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
NECAP1-225ENST00000640209 KDM5CP41229 1560 aa12.94□□□□□ -0.34
NECAP1-225ENST00000640209 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
NECAP1-225ENST00000640209 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
NECAP1-225ENST00000640209 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
NECAP1-225ENST00000640209 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
NECAP1-225ENST00000640209 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
NECAP1-225ENST00000640209 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
NECAP1-225ENST00000640209 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
NECAP1-225ENST00000640209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
NECAP1-225ENST00000640209 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-225ENST00000640209 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
NECAP1-225ENST00000640209 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
NECAP1-225ENST00000640209 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
NECAP1-225ENST00000640209 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
NECAP1-225ENST00000640209 ABCC2Q92887 1545 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms