RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 EFCAB2Q5VUJ9 269 aa36.18■■■■□ 3.38
SHISA9-205ENST00000639941 PREX2Q70Z35 1606 aa36.17■■■■□ 3.38
SHISA9-205ENST00000639941 ZMYM4Q5VZL5 1548 aa36.17■■■■□ 3.38
SHISA9-205ENST00000639941 POGZQ7Z3K3 1410 aa36.15■■■■□ 3.38
SHISA9-205ENST00000639941 ARHGEF40Q8TER5 1519 aa36.14■■■■□ 3.38
SHISA9-205ENST00000639941 CDC42BPAQ5VT25 1732 aa36.14■■■■□ 3.38
SHISA9-205ENST00000639941 YEATS2Q9ULM3 1422 aa36.08■■■■□ 3.37
SHISA9-205ENST00000639941 ZFYVE16Q7Z3T8 1539 aa36.04■■■■□ 3.36
SHISA9-205ENST00000639941 MTUS2Q5JR59 1369 aa36.03■■■■□ 3.36
SHISA9-205ENST00000639941 VPS8Q8N3P4 1428 aa36.02■■■■□ 3.36
SHISA9-205ENST00000639941 GPATCH8Q9UKJ3 1502 aaKnown RBP36.02■■■■□ 3.36
SHISA9-205ENST00000639941 MAGI2Q86UL8 1455 aa36.01■■■■□ 3.36
SHISA9-205ENST00000639941 ABCC1P33527 1531 aa36.01■■■■□ 3.36
SHISA9-205ENST00000639941 ARHGEF12Q9NZN5 1544 aa36.01■■■■□ 3.36
SHISA9-205ENST00000639941 SIGLEC1Q9BZZ2 1709 aa36■■■■□ 3.35
SHISA9-205ENST00000639941 EHBP1L1Q8N3D4 1523 aa35.99■■■■□ 3.35
SHISA9-205ENST00000639941 KDM5CP41229 1560 aa35.98■■■■□ 3.35
SHISA9-205ENST00000639941 ZNF518AQ6AHZ1 1483 aa35.98■■■■□ 3.35
SHISA9-205ENST00000639941 ADAMTSL3P82987 1691 aa35.97■■■■□ 3.35
SHISA9-205ENST00000639941 ITSN2Q9NZM3 1697 aa35.96■■■■□ 3.35
SHISA9-205ENST00000639941 BCORL1Q5H9F3 1711 aa35.95■■■■□ 3.35
SHISA9-205ENST00000639941 AFAP1Q8N556 730 aa35.95■■■■□ 3.35
SHISA9-205ENST00000639941 SAMD9LQ8IVG5 1584 aa35.94■■■■□ 3.34
SHISA9-205ENST00000639941 TIAM1Q13009 1591 aa35.93■■■■□ 3.34
SHISA9-205ENST00000639941 TRAPPC8Q9Y2L5 1435 aa35.92■■■■□ 3.34
SHISA9-205ENST00000639941 ARID4BQ4LE39 1312 aaPredicted RBP35.89■■■■□ 3.34
SHISA9-205ENST00000639941 CCNB3Q8WWL7 1395 aa35.89■■■■□ 3.34
SHISA9-205ENST00000639941 HECW2Q9P2P5 1572 aa35.87■■■■□ 3.33
SHISA9-205ENST00000639941 ZNF777Q9ULD5 760 aaPredicted RBP35.85■■■■□ 3.33
SHISA9-205ENST00000639941 ATP10AO60312 1499 aa35.84■■■■□ 3.33
SHISA9-205ENST00000639941 SYCP2Q9BX26 1530 aa35.83■■■■□ 3.33
SHISA9-205ENST00000639941 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
SHISA9-205ENST00000639941 CFDP1Q9UEE9 299 aaPredicted RBP35.82■■■■□ 3.32
SHISA9-205ENST00000639941 MLH3Q9UHC1 1453 aa35.81■■■■□ 3.32
SHISA9-205ENST00000639941 C9orf84Q5VXU9 1444 aa35.81■■■■□ 3.32
SHISA9-205ENST00000639941 DIP2CQ9Y2E4 1556 aa35.81■■■■□ 3.32
SHISA9-205ENST00000639941 SUPT6HQ7KZ85 1726 aaKnown RBP35.8■■■■□ 3.32
SHISA9-205ENST00000639941 ABCA6Q8N139 1617 aa35.79■■■■□ 3.32
SHISA9-205ENST00000639941 NCOA2Q15596 1464 aa35.79■■■■□ 3.32
SHISA9-205ENST00000639941 PTPRMP28827 1452 aa35.77■■■■□ 3.32
SHISA9-205ENST00000639941 LRRC9Q6ZRR7 1453 aa35.77■■■■□ 3.32
SHISA9-205ENST00000639941 KIDINS220Q9ULH0 1771 aa35.76■■■■□ 3.31
SHISA9-205ENST00000639941 HNRNPMP52272 730 aaKnown RBP eCLIP35.75■■■■□ 3.31
SHISA9-205ENST00000639941 KIAA1107Q9UPP5 1409 aa35.74■■■■□ 3.31
SHISA9-205ENST00000639941 MAP3K1Q13233 1512 aa35.74■■■■□ 3.31
SHISA9-205ENST00000639941 ZNF644Q9H582 1327 aaPredicted RBP35.72■■■■□ 3.31
SHISA9-205ENST00000639941 PLEKHH2Q8IVE3 1493 aa35.72■■■■□ 3.31
SHISA9-205ENST00000639941 RIMS1Q86UR5 1692 aaKnown RBP35.71■■■■□ 3.31
SHISA9-205ENST00000639941 KANK4Q5T7N3 995 aaPredicted RBP35.7■■■■□ 3.31
SHISA9-205ENST00000639941 MYT1LQ9UL68 1186 aa35.7■■■■□ 3.31
SHISA9-205ENST00000639941 REREQ9P2R6 1566 aa35.69■■■■□ 3.3
SHISA9-205ENST00000639941 MLECQ14165 292 aa35.67■■■■□ 3.3
SHISA9-205ENST00000639941 MBD5Q9P267 1494 aa35.64■■■■□ 3.3
SHISA9-205ENST00000639941 FER1L4A9Z1Z3 1794 aa35.62■■■■□ 3.29
SHISA9-205ENST00000639941 INO80Q9ULG1 1556 aaPredicted RBP35.62■■■■□ 3.29
SHISA9-205ENST00000639941 SPAG9O60271 1321 aaKnown RBP35.6■■■■□ 3.29
SHISA9-205ENST00000639941 ATP7AQ04656 1500 aa35.59■■■■□ 3.29
SHISA9-205ENST00000639941 CAMSAP2Q08AD1 1489 aa35.57■■■■□ 3.28
SHISA9-205ENST00000639941 AGLP35573 1532 aa35.57■■■■□ 3.28
SHISA9-205ENST00000639941 PLXNC1O60486 1568 aa35.47■■■■□ 3.27
SHISA9-205ENST00000639941 CCDC141Q6ZP82 1450 aa35.46■■■■□ 3.27
SHISA9-205ENST00000639941 MYOM3Q5VTT5 1437 aa35.44■■■■□ 3.26
SHISA9-205ENST00000639941 PLPPR3Q6T4P5 718 aa35.44■■■■□ 3.26
SHISA9-205ENST00000639941 A2MP01023 1474 aa35.42■■■■□ 3.26
SHISA9-205ENST00000639941 APLP2Q06481 763 aa35.42■■■■□ 3.26
SHISA9-205ENST00000639941 ARHGEF5Q12774 1597 aa35.42■■■■□ 3.26
SHISA9-205ENST00000639941 RTEL1-TNFRSF6BF6WH68 1400 aa35.41■■■■□ 3.26
SHISA9-205ENST00000639941 ADGBQ8N7X0 1667 aa35.4■■■■□ 3.26
SHISA9-205ENST00000639941 LMTK3Q96Q04 1460 aa35.38■■■■□ 3.25
SHISA9-205ENST00000639941 MIA2Q96PC5 1412 aa35.38■■■■□ 3.25
SHISA9-205ENST00000639941 CEBPAP49715 358 aaPredicted RBP35.35■■■■□ 3.25
SHISA9-205ENST00000639941 RSPH4AQ5TD94 716 aa35.33■■■■□ 3.25
SHISA9-205ENST00000639941 C3P01024 1663 aa35.3■■■■□ 3.24
SHISA9-205ENST00000639941 DHX29Q7Z478 1369 aaKnown RBP35.25■■■■□ 3.23
SHISA9-205ENST00000639941 PTPN23Q9H3S7 1636 aa35.25■■■■□ 3.23
SHISA9-205ENST00000639941 MAST1Q9Y2H9 1570 aa35.25■■■■□ 3.23
SHISA9-205ENST00000639941 CNTLNQ9NXG0 1405 aa35.23■■■■□ 3.23
SHISA9-205ENST00000639941 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
SHISA9-205ENST00000639941 TSPY4P0CV99 314 aa35.2■■■■□ 3.23
SHISA9-205ENST00000639941 TSPY10P0CW01 314 aa35.2■■■■□ 3.23
SHISA9-205ENST00000639941 ESF1Q9H501 851 aaKnown RBP35.2■■■■□ 3.23
SHISA9-205ENST00000639941 MROH2AA6NES4 1674 aa35.2■■■■□ 3.23
SHISA9-205ENST00000639941 PREX1Q8TCU6 1659 aa35.19■■■■□ 3.22
SHISA9-205ENST00000639941 CLTCQ00610 1675 aaKnown RBP35.18■■■■□ 3.22
SHISA9-205ENST00000639941 GGT6Q6P531 493 aa35.18■■■■□ 3.22
SHISA9-205ENST00000639941 TCOF1Q13428 1488 aaKnown RBP35.17■■■■□ 3.22
SHISA9-205ENST00000639941 HSPA2P54652 639 aa35.17■■■■□ 3.22
SHISA9-205ENST00000639941 CROCC2H7BZ55 1655 aa35.14■■■■□ 3.22
SHISA9-205ENST00000639941 ABCC5O15440 1437 aa35.14■■■■□ 3.22
SHISA9-205ENST00000639941 SETD1BQ9UPS6 1966 aaKnown RBP35.13■■■■□ 3.21
SHISA9-205ENST00000639941 ZMYM3Q14202 1370 aa35.12■■■■□ 3.21
SHISA9-205ENST00000639941 KIF3BO15066 747 aa35.1■■■■□ 3.21
SHISA9-205ENST00000639941 DNMT1P26358 1616 aaKnown RBP35.09■■■■□ 3.21
SHISA9-205ENST00000639941 SHANK2Q9UPX8 1470 aa35.08■■■■□ 3.21
SHISA9-205ENST00000639941 DAPK1P53355 1430 aa35.06■■■■□ 3.2
SHISA9-205ENST00000639941 UHRF1BP1Q6BDS2 1440 aa35.06■■■■□ 3.2
SHISA9-205ENST00000639941 PPP6R1Q9UPN7 881 aa35.05■■■■□ 3.2
SHISA9-205ENST00000639941 NPATQ14207 1427 aa35.02■■■■□ 3.2
SHISA9-205ENST00000639941 RNF17Q9BXT8 1623 aaKnown RBP35■■■■□ 3.19
SHISA9-205ENST00000639941 PTPRKQ15262 1439 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms