RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
PAX6-260ENST00000639920 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
PAX6-260ENST00000639920 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
PAX6-260ENST00000639920 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
PAX6-260ENST00000639920 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
PAX6-260ENST00000639920 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
PAX6-260ENST00000639920 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
PAX6-260ENST00000639920 EHBP1L1Q8N3D4 1523 aa16.31■□□□□ 0.2
PAX6-260ENST00000639920 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
PAX6-260ENST00000639920 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
PAX6-260ENST00000639920 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
PAX6-260ENST00000639920 ABCC1P33527 1531 aa16.29■□□□□ 0.2
PAX6-260ENST00000639920 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
PAX6-260ENST00000639920 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
PAX6-260ENST00000639920 KDM5CP41229 1560 aa16.28■□□□□ 0.2
PAX6-260ENST00000639920 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
PAX6-260ENST00000639920 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
PAX6-260ENST00000639920 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
PAX6-260ENST00000639920 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
PAX6-260ENST00000639920 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
PAX6-260ENST00000639920 SAMD9LQ8IVG5 1584 aa16.24■□□□□ 0.19
PAX6-260ENST00000639920 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
PAX6-260ENST00000639920 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
PAX6-260ENST00000639920 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
PAX6-260ENST00000639920 ADAMTSL3P82987 1691 aa16.22■□□□□ 0.19
PAX6-260ENST00000639920 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
PAX6-260ENST00000639920 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
PAX6-260ENST00000639920 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
PAX6-260ENST00000639920 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
PAX6-260ENST00000639920 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
PAX6-260ENST00000639920 SYCP2Q9BX26 1530 aa16.2■□□□□ 0.18
PAX6-260ENST00000639920 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
PAX6-260ENST00000639920 CFDP1Q9UEE9 299 aaPredicted RBP16.2■□□□□ 0.18
PAX6-260ENST00000639920 ATP10AO60312 1499 aa16.2■□□□□ 0.18
PAX6-260ENST00000639920 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
PAX6-260ENST00000639920 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
PAX6-260ENST00000639920 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
PAX6-260ENST00000639920 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
PAX6-260ENST00000639920 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
PAX6-260ENST00000639920 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
PAX6-260ENST00000639920 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
PAX6-260ENST00000639920 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
PAX6-260ENST00000639920 REREQ9P2R6 1566 aa16.16■□□□□ 0.18
PAX6-260ENST00000639920 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
PAX6-260ENST00000639920 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
PAX6-260ENST00000639920 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
PAX6-260ENST00000639920 PTPRMP28827 1452 aa16.14■□□□□ 0.17
PAX6-260ENST00000639920 HNRNPMP52272 730 aaKnown RBP eCLIP16.13■□□□□ 0.17
PAX6-260ENST00000639920 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
PAX6-260ENST00000639920 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
PAX6-260ENST00000639920 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
PAX6-260ENST00000639920 AGLP35573 1532 aa16.1■□□□□ 0.17
PAX6-260ENST00000639920 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
PAX6-260ENST00000639920 SPAG9O60271 1321 aaKnown RBP16.1■□□□□ 0.17
PAX6-260ENST00000639920 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
PAX6-260ENST00000639920 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
PAX6-260ENST00000639920 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.17
PAX6-260ENST00000639920 FER1L4A9Z1Z3 1794 aa16.06■□□□□ 0.16
PAX6-260ENST00000639920 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
PAX6-260ENST00000639920 MLECQ14165 292 aa16.06■□□□□ 0.16
PAX6-260ENST00000639920 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
PAX6-260ENST00000639920 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
PAX6-260ENST00000639920 APLP2Q06481 763 aa16.05■□□□□ 0.16
PAX6-260ENST00000639920 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
PAX6-260ENST00000639920 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
PAX6-260ENST00000639920 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
PAX6-260ENST00000639920 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
PAX6-260ENST00000639920 A2MP01023 1474 aa16.02■□□□□ 0.15
PAX6-260ENST00000639920 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
PAX6-260ENST00000639920 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.15
PAX6-260ENST00000639920 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
PAX6-260ENST00000639920 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
PAX6-260ENST00000639920 PTPN23Q9H3S7 1636 aa15.95■□□□□ 0.14
PAX6-260ENST00000639920 DHX29Q7Z478 1369 aaKnown RBP15.95■□□□□ 0.14
PAX6-260ENST00000639920 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
PAX6-260ENST00000639920 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
PAX6-260ENST00000639920 TSPY4P0CV99 314 aa15.93■□□□□ 0.14
PAX6-260ENST00000639920 TSPY10P0CW01 314 aa15.93■□□□□ 0.14
PAX6-260ENST00000639920 CEBPAP49715 358 aaPredicted RBP15.92■□□□□ 0.14
PAX6-260ENST00000639920 C3P01024 1663 aa15.92■□□□□ 0.14
PAX6-260ENST00000639920 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
PAX6-260ENST00000639920 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
PAX6-260ENST00000639920 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
PAX6-260ENST00000639920 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
PAX6-260ENST00000639920 ABCC5O15440 1437 aa15.9■□□□□ 0.14
PAX6-260ENST00000639920 CROCC2H7BZ55 1655 aa15.89■□□□□ 0.13
PAX6-260ENST00000639920 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
PAX6-260ENST00000639920 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
PAX6-260ENST00000639920 PREX1Q8TCU6 1659 aa15.88■□□□□ 0.13
PAX6-260ENST00000639920 DAPK1P53355 1430 aa15.87■□□□□ 0.13
PAX6-260ENST00000639920 GGT6Q6P531 493 aa15.87■□□□□ 0.13
PAX6-260ENST00000639920 FAM135AQ9P2D6 1515 aa15.87■□□□□ 0.13
PAX6-260ENST00000639920 CLTCQ00610 1675 aaKnown RBP15.86■□□□□ 0.13
PAX6-260ENST00000639920 ZMYM3Q14202 1370 aa15.86■□□□□ 0.13
PAX6-260ENST00000639920 KIF3BO15066 747 aa15.85■□□□□ 0.13
PAX6-260ENST00000639920 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
PAX6-260ENST00000639920 NPATQ14207 1427 aa15.85■□□□□ 0.13
PAX6-260ENST00000639920 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
PAX6-260ENST00000639920 EIF2AK4Q9P2K8 1649 aaKnown RBP15.84■□□□□ 0.13
PAX6-260ENST00000639920 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms