RNA–Protein interactions for RNA: ENST00000639920.1

PAX6-260, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-260ENST00000639920 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
PAX6-260ENST00000639920 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
PAX6-260ENST00000639920 ABCC9O60706 1549 aa22.01■■□□□ 1.11
PAX6-260ENST00000639920 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
PAX6-260ENST00000639920 NACADO15069 1562 aa21.1■□□□□ 0.97
PAX6-260ENST00000639920 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
PAX6-260ENST00000639920 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
PAX6-260ENST00000639920 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
PAX6-260ENST00000639920 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
PAX6-260ENST00000639920 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.9
PAX6-260ENST00000639920 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
PAX6-260ENST00000639920 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
PAX6-260ENST00000639920 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
PAX6-260ENST00000639920 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
PAX6-260ENST00000639920 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
PAX6-260ENST00000639920 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
PAX6-260ENST00000639920 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
PAX6-260ENST00000639920 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
PAX6-260ENST00000639920 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
PAX6-260ENST00000639920 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
PAX6-260ENST00000639920 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
PAX6-260ENST00000639920 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
PAX6-260ENST00000639920 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
PAX6-260ENST00000639920 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
PAX6-260ENST00000639920 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
PAX6-260ENST00000639920 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
PAX6-260ENST00000639920 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
PAX6-260ENST00000639920 WIZO95785 1651 aa19.14■□□□□ 0.65
PAX6-260ENST00000639920 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
PAX6-260ENST00000639920 NESP48681 1621 aa19.02■□□□□ 0.64
PAX6-260ENST00000639920 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
PAX6-260ENST00000639920 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
PAX6-260ENST00000639920 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
PAX6-260ENST00000639920 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
PAX6-260ENST00000639920 CUX2O14529 1486 aa18.85■□□□□ 0.61
PAX6-260ENST00000639920 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
PAX6-260ENST00000639920 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
PAX6-260ENST00000639920 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
PAX6-260ENST00000639920 CFTRP13569 1480 aa18.77■□□□□ 0.59
PAX6-260ENST00000639920 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
PAX6-260ENST00000639920 FANCD2Q9BXW9 1451 aa18.66■□□□□ 0.58
PAX6-260ENST00000639920 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
PAX6-260ENST00000639920 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
PAX6-260ENST00000639920 WDR62O43379 1518 aa18.62■□□□□ 0.57
PAX6-260ENST00000639920 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
PAX6-260ENST00000639920 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
PAX6-260ENST00000639920 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
PAX6-260ENST00000639920 DNAJC5Q9H3Z4 198 aa18.39■□□□□ 0.53
PAX6-260ENST00000639920 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
PAX6-260ENST00000639920 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
PAX6-260ENST00000639920 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
PAX6-260ENST00000639920 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
PAX6-260ENST00000639920 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
PAX6-260ENST00000639920 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
PAX6-260ENST00000639920 CUX1P39880 1505 aa18.18■□□□□ 0.5
PAX6-260ENST00000639920 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
PAX6-260ENST00000639920 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
PAX6-260ENST00000639920 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
PAX6-260ENST00000639920 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
PAX6-260ENST00000639920 SOGA1O94964 1423 aa18.09■□□□□ 0.49
PAX6-260ENST00000639920 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
PAX6-260ENST00000639920 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
PAX6-260ENST00000639920 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
PAX6-260ENST00000639920 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
PAX6-260ENST00000639920 OSCARQ8IYS5 282 aa18■□□□□ 0.47
PAX6-260ENST00000639920 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
PAX6-260ENST00000639920 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
PAX6-260ENST00000639920 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
PAX6-260ENST00000639920 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
PAX6-260ENST00000639920 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
PAX6-260ENST00000639920 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
PAX6-260ENST00000639920 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
PAX6-260ENST00000639920 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
PAX6-260ENST00000639920 CHD1O14646 1710 aa17.89■□□□□ 0.46
PAX6-260ENST00000639920 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
PAX6-260ENST00000639920 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
PAX6-260ENST00000639920 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
PAX6-260ENST00000639920 FBLN2P98095 1184 aa17.81■□□□□ 0.44
PAX6-260ENST00000639920 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
PAX6-260ENST00000639920 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
PAX6-260ENST00000639920 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
PAX6-260ENST00000639920 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
PAX6-260ENST00000639920 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
PAX6-260ENST00000639920 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
PAX6-260ENST00000639920 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
PAX6-260ENST00000639920 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
PAX6-260ENST00000639920 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
PAX6-260ENST00000639920 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
PAX6-260ENST00000639920 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
PAX6-260ENST00000639920 NUP160Q12769 1436 aa17.64■□□□□ 0.41
PAX6-260ENST00000639920 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
PAX6-260ENST00000639920 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
PAX6-260ENST00000639920 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
PAX6-260ENST00000639920 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PAX6-260ENST00000639920 CUL7Q14999 1698 aa17.55■□□□□ 0.4
PAX6-260ENST00000639920 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
PAX6-260ENST00000639920 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
PAX6-260ENST00000639920 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
PAX6-260ENST00000639920 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
PAX6-260ENST00000639920 CARMIL1Q5VZK9 1371 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms