RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.43□□□□□ -0.58
RTTN-215ENST00000639487 KIAA1107Q9UPP5 1409 aa11.42□□□□□ -0.58
RTTN-215ENST00000639487 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
RTTN-215ENST00000639487 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
RTTN-215ENST00000639487 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
RTTN-215ENST00000639487 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
RTTN-215ENST00000639487 KIDINS220Q9ULH0 1771 aa11.37□□□□□ -0.59
RTTN-215ENST00000639487 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
RTTN-215ENST00000639487 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
RTTN-215ENST00000639487 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
RTTN-215ENST00000639487 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
RTTN-215ENST00000639487 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
RTTN-215ENST00000639487 PRDM15P57071 1507 aaPredicted RBP11.34□□□□□ -0.59
RTTN-215ENST00000639487 IFT172Q9UG01 1749 aa11.34□□□□□ -0.59
RTTN-215ENST00000639487 ATP10BO94823 1461 aa11.33□□□□□ -0.6
RTTN-215ENST00000639487 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
RTTN-215ENST00000639487 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
RTTN-215ENST00000639487 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
RTTN-215ENST00000639487 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
RTTN-215ENST00000639487 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
RTTN-215ENST00000639487 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
RTTN-215ENST00000639487 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
RTTN-215ENST00000639487 ABCA6Q8N139 1617 aa11.3□□□□□ -0.6
RTTN-215ENST00000639487 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
RTTN-215ENST00000639487 TROQ12816 1431 aaPredicted RBP11.29□□□□□ -0.6
RTTN-215ENST00000639487 MADDQ8WXG6 1647 aa11.28□□□□□ -0.6
RTTN-215ENST00000639487 PREX1Q8TCU6 1659 aa11.26□□□□□ -0.61
RTTN-215ENST00000639487 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
RTTN-215ENST00000639487 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
RTTN-215ENST00000639487 TET3O43151 1660 aa11.25□□□□□ -0.61
RTTN-215ENST00000639487 PLCH2O75038 1416 aa11.24□□□□□ -0.61
RTTN-215ENST00000639487 LAMC1P11047 1609 aa11.23□□□□□ -0.61
RTTN-215ENST00000639487 LMTK3Q96Q04 1460 aa11.23□□□□□ -0.61
RTTN-215ENST00000639487 CEP152O94986 1710 aa11.22□□□□□ -0.61
RTTN-215ENST00000639487 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
RTTN-215ENST00000639487 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.61
RTTN-215ENST00000639487 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
RTTN-215ENST00000639487 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
RTTN-215ENST00000639487 RRBP1Q9P2E9 1410 aaKnown RBP11.2□□□□□ -0.62
RTTN-215ENST00000639487 ATP10AO60312 1499 aa11.19□□□□□ -0.62
RTTN-215ENST00000639487 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
RTTN-215ENST00000639487 ASXL2Q76L83 1435 aa11.17□□□□□ -0.62
RTTN-215ENST00000639487 POGZQ7Z3K3 1410 aa11.17□□□□□ -0.62
RTTN-215ENST00000639487 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
RTTN-215ENST00000639487 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
RTTN-215ENST00000639487 CHIC1Q5VXU3 224 aa11.17□□□□□ -0.62
RTTN-215ENST00000639487 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 EFCAB6Q5THR3 1501 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 MBD5Q9P267 1494 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 PTPRGP23470 1445 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 USP54Q70EL1 1684 aa11.16□□□□□ -0.62
RTTN-215ENST00000639487 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.62
RTTN-215ENST00000639487 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
RTTN-215ENST00000639487 TMEM131LA2VDJ0 1609 aa11.14□□□□□ -0.63
RTTN-215ENST00000639487 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
RTTN-215ENST00000639487 DUOX2Q9NRD8 1548 aa11.14□□□□□ -0.63
RTTN-215ENST00000639487 ARHGAP31Q2M1Z3 1444 aa11.14□□□□□ -0.63
RTTN-215ENST00000639487 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
RTTN-215ENST00000639487 DIP2AQ14689 1571 aa11.14□□□□□ -0.63
RTTN-215ENST00000639487 CLIP1P30622 1438 aa11.13□□□□□ -0.63
RTTN-215ENST00000639487 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
RTTN-215ENST00000639487 C3P01024 1663 aa11.11□□□□□ -0.63
RTTN-215ENST00000639487 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
RTTN-215ENST00000639487 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
RTTN-215ENST00000639487 SYNMO15061 1565 aa11.1□□□□□ -0.63
RTTN-215ENST00000639487 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
RTTN-215ENST00000639487 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
RTTN-215ENST00000639487 NPATQ14207 1427 aa11.08□□□□□ -0.64
RTTN-215ENST00000639487 MYO3AQ8NEV4 1616 aa11.06□□□□□ -0.64
RTTN-215ENST00000639487 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
RTTN-215ENST00000639487 CCDC141Q6ZP82 1450 aa11.02□□□□□ -0.64
RTTN-215ENST00000639487 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.64
RTTN-215ENST00000639487 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
RTTN-215ENST00000639487 CNTLNQ9NXG0 1405 aa11.02□□□□□ -0.64
RTTN-215ENST00000639487 CD109Q6YHK3 1445 aa11.02□□□□□ -0.65
RTTN-215ENST00000639487 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
RTTN-215ENST00000639487 PPLO60437 1756 aa11□□□□□ -0.65
RTTN-215ENST00000639487 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
RTTN-215ENST00000639487 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
RTTN-215ENST00000639487 FANCAO15360 1455 aa10.99□□□□□ -0.65
RTTN-215ENST00000639487 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
RTTN-215ENST00000639487 HRCP23327 699 aa10.98□□□□□ -0.65
RTTN-215ENST00000639487 PLA2R1Q13018 1463 aa10.98□□□□□ -0.65
RTTN-215ENST00000639487 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
RTTN-215ENST00000639487 SLIT1O75093 1534 aa10.98□□□□□ -0.65
RTTN-215ENST00000639487 E9PCH4 1651 aa10.97□□□□□ -0.65
RTTN-215ENST00000639487 IQGAP1P46940 1657 aa10.96□□□□□ -0.66
RTTN-215ENST00000639487 TRPM2O94759 1503 aa10.96□□□□□ -0.66
RTTN-215ENST00000639487 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
RTTN-215ENST00000639487 MED14O60244 1454 aa10.94□□□□□ -0.66
RTTN-215ENST00000639487 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
RTTN-215ENST00000639487 CLTCQ00610 1675 aaKnown RBP10.93□□□□□ -0.66
RTTN-215ENST00000639487 SYCP2Q9BX26 1530 aa10.92□□□□□ -0.66
RTTN-215ENST00000639487 NRXN1Q9ULB1 1477 aa10.92□□□□□ -0.66
RTTN-215ENST00000639487 KIF1BO60333 1816 aa10.92□□□□□ -0.66
RTTN-215ENST00000639487 ADGRB2O60241 1585 aa10.91□□□□□ -0.66
RTTN-215ENST00000639487 SETBP1Q9Y6X0 1596 aa10.91□□□□□ -0.66
RTTN-215ENST00000639487 ABCC3O15438 1527 aa10.91□□□□□ -0.66
RTTN-215ENST00000639487 ARHGAP23Q9P227 1491 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms