RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 GPS2Q13227 327 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 TPM4P67936 248 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 FOXD1Q16676 465 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 TPM2P07951 284 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
KCNMA1-259ENST00000639406 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.22
KCNMA1-259ENST00000639406 PHF14O94880 888 aa13.71□□□□□ -0.22
KCNMA1-259ENST00000639406 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
KCNMA1-259ENST00000639406 CCDC66A2RUB6 948 aa13.7□□□□□ -0.22
KCNMA1-259ENST00000639406 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-259ENST00000639406 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
KCNMA1-259ENST00000639406 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-259ENST00000639406 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
KCNMA1-259ENST00000639406 UBE2Q2Q8WVN8 375 aa13.69□□□□□ -0.22
KCNMA1-259ENST00000639406 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
KCNMA1-259ENST00000639406 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-259ENST00000639406 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
KCNMA1-259ENST00000639406 RCAN3Q9UKA8 241 aa13.66□□□□□ -0.22
KCNMA1-259ENST00000639406 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-259ENST00000639406 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
KCNMA1-259ENST00000639406 PDE4AP27815 886 aa13.64□□□□□ -0.23
KCNMA1-259ENST00000639406 RRP9O43818 475 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-259ENST00000639406 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
KCNMA1-259ENST00000639406 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-259ENST00000639406 PDE4CQ08493 712 aa13.63□□□□□ -0.23
KCNMA1-259ENST00000639406 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
KCNMA1-259ENST00000639406 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
KCNMA1-259ENST00000639406 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
KCNMA1-259ENST00000639406 CCAR2Q8N163 923 aaKnown RBP13.62□□□□□ -0.23
KCNMA1-259ENST00000639406 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
KCNMA1-259ENST00000639406 RWDD1Q9H446 243 aaPredicted RBP13.61□□□□□ -0.23
KCNMA1-259ENST00000639406 TAF7LQ5H9L4 462 aa13.61□□□□□ -0.23
KCNMA1-259ENST00000639406 RBM10P98175 930 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-259ENST00000639406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.23
KCNMA1-259ENST00000639406 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
KCNMA1-259ENST00000639406 TPM3P06753 285 aa13.6□□□□□ -0.23
KCNMA1-259ENST00000639406 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
KCNMA1-259ENST00000639406 NUDCQ9Y266 331 aa13.58□□□□□ -0.23
KCNMA1-259ENST00000639406 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
KCNMA1-259ENST00000639406 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
KCNMA1-259ENST00000639406 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
KCNMA1-259ENST00000639406 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
KCNMA1-259ENST00000639406 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
KCNMA1-259ENST00000639406 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
KCNMA1-259ENST00000639406 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
KCNMA1-259ENST00000639406 RRP7BPQ9NSQ0 103 aa13.55□□□□□ -0.24
KCNMA1-259ENST00000639406 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
KCNMA1-259ENST00000639406 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
KCNMA1-259ENST00000639406 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
KCNMA1-259ENST00000639406 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
KCNMA1-259ENST00000639406 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-259ENST00000639406 MRE11P49959 708 aa13.54□□□□□ -0.24
KCNMA1-259ENST00000639406 TAF3Q5VWG9 929 aa13.54□□□□□ -0.24
KCNMA1-259ENST00000639406 EEA1Q15075 1411 aa13.54□□□□□ -0.24
KCNMA1-259ENST00000639406 HSP90B1P14625 803 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-259ENST00000639406 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
KCNMA1-259ENST00000639406 RRP12Q5JTH9 1297 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-259ENST00000639406 CCDC70Q6NSX1 233 aa13.52□□□□□ -0.24
KCNMA1-259ENST00000639406 CLIP1P30622 1438 aa13.52□□□□□ -0.25
KCNMA1-259ENST00000639406 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
KCNMA1-259ENST00000639406 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
KCNMA1-259ENST00000639406 H0YHG0 523 aa13.51□□□□□ -0.25
KCNMA1-259ENST00000639406 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
KCNMA1-259ENST00000639406 ST18O60284 1047 aa13.5□□□□□ -0.25
KCNMA1-259ENST00000639406 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
KCNMA1-259ENST00000639406 APBB1O00213 710 aa13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 CLSTN1O94985 981 aa13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 ACBD3Q9H3P7 528 aa13.49□□□□□ -0.25
KCNMA1-259ENST00000639406 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
KCNMA1-259ENST00000639406 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 AK7Q96M32 723 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 HSP90B2PQ58FF3 399 aa13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
KCNMA1-259ENST00000639406 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 BECN2A8MW95 431 aa13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 CCDC191Q8NCU4 936 aa13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 MNS1Q8NEH6 495 aa13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
KCNMA1-259ENST00000639406 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.26
KCNMA1-259ENST00000639406 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
KCNMA1-259ENST00000639406 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-259ENST00000639406 CCDC34Q96HJ3 373 aa13.45□□□□□ -0.26
KCNMA1-259ENST00000639406 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
KCNMA1-259ENST00000639406 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-259ENST00000639406 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-259ENST00000639406 NPHP1O15259 732 aa13.44□□□□□ -0.26
KCNMA1-259ENST00000639406 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms