RNA–Protein interactions for RNA: ENST00000638834.1

SPIN3-213, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 856 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-213ENST00000638834 KIF14Q15058 1648 aa24.54■■□□□ 1.52
SPIN3-213ENST00000638834 LRRIQ1Q96JM4 1722 aa24.54■■□□□ 1.52
SPIN3-213ENST00000638834 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
SPIN3-213ENST00000638834 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
SPIN3-213ENST00000638834 MYO5CQ9NQX4 1742 aa24.52■■□□□ 1.52
SPIN3-213ENST00000638834 RIMS1Q86UR5 1692 aaKnown RBP24.51■■□□□ 1.51
SPIN3-213ENST00000638834 EFCAB2Q5VUJ9 269 aa24.5■■□□□ 1.51
SPIN3-213ENST00000638834 PCF11O94913 1555 aaKnown RBP24.48■■□□□ 1.51
SPIN3-213ENST00000638834 LMTK3Q96Q04 1460 aa24.48■■□□□ 1.51
SPIN3-213ENST00000638834 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
SPIN3-213ENST00000638834 ATP10AO60312 1499 aa24.43■■□□□ 1.5
SPIN3-213ENST00000638834 CLIP1P30622 1438 aa24.43■■□□□ 1.5
SPIN3-213ENST00000638834 ARHGAP5Q13017 1502 aa24.4■■□□□ 1.5
SPIN3-213ENST00000638834 KDM5CP41229 1560 aa24.4■■□□□ 1.5
SPIN3-213ENST00000638834 ZNF518AQ6AHZ1 1483 aa24.39■■□□□ 1.5
SPIN3-213ENST00000638834 C9orf84Q5VXU9 1444 aa24.39■■□□□ 1.5
SPIN3-213ENST00000638834 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
SPIN3-213ENST00000638834 MLECQ14165 292 aa24.38■■□□□ 1.49
SPIN3-213ENST00000638834 AFAP1Q8N556 730 aa24.38■■□□□ 1.49
SPIN3-213ENST00000638834 ARHGEF12Q9NZN5 1544 aa24.38■■□□□ 1.49
SPIN3-213ENST00000638834 CCDC18Q5T9S5 1454 aa24.38■■□□□ 1.49
SPIN3-213ENST00000638834 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
SPIN3-213ENST00000638834 PREX2Q70Z35 1606 aa24.33■■□□□ 1.49
SPIN3-213ENST00000638834 HSPA2P54652 639 aa24.31■■□□□ 1.48
SPIN3-213ENST00000638834 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
SPIN3-213ENST00000638834 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
SPIN3-213ENST00000638834 DIP2CQ9Y2E4 1556 aa24.3■■□□□ 1.48
SPIN3-213ENST00000638834 MLH3Q9UHC1 1453 aa24.3■■□□□ 1.48
SPIN3-213ENST00000638834 ABCC1P33527 1531 aa24.3■■□□□ 1.48
SPIN3-213ENST00000638834 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
SPIN3-213ENST00000638834 REREQ9P2R6 1566 aa24.28■■□□□ 1.48
SPIN3-213ENST00000638834 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
SPIN3-213ENST00000638834 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
SPIN3-213ENST00000638834 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
SPIN3-213ENST00000638834 ITSN2Q9NZM3 1697 aa24.25■■□□□ 1.47
SPIN3-213ENST00000638834 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
SPIN3-213ENST00000638834 AGLP35573 1532 aa24.2■■□□□ 1.47
SPIN3-213ENST00000638834 KIDINS220Q9ULH0 1771 aa24.2■■□□□ 1.46
SPIN3-213ENST00000638834 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.46
SPIN3-213ENST00000638834 MYT1LQ9UL68 1186 aa24.19■■□□□ 1.46
SPIN3-213ENST00000638834 PREX1Q8TCU6 1659 aa24.18■■□□□ 1.46
SPIN3-213ENST00000638834 SAMD9LQ8IVG5 1584 aa24.17■■□□□ 1.46
SPIN3-213ENST00000638834 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
SPIN3-213ENST00000638834 SYCP2Q9BX26 1530 aa24.12■■□□□ 1.45
SPIN3-213ENST00000638834 ZNF777Q9ULD5 760 aaPredicted RBP24.11■■□□□ 1.45
SPIN3-213ENST00000638834 C3P01024 1663 aa24.11■■□□□ 1.45
SPIN3-213ENST00000638834 HNRNPMP52272 730 aaKnown RBP eCLIP24.09■■□□□ 1.45
SPIN3-213ENST00000638834 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
SPIN3-213ENST00000638834 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
SPIN3-213ENST00000638834 STRCQ7RTU9 1775 aa24.06■■□□□ 1.44
SPIN3-213ENST00000638834 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
SPIN3-213ENST00000638834 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
SPIN3-213ENST00000638834 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
SPIN3-213ENST00000638834 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
SPIN3-213ENST00000638834 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
SPIN3-213ENST00000638834 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
SPIN3-213ENST00000638834 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
SPIN3-213ENST00000638834 CNTLNQ9NXG0 1405 aa24.02■■□□□ 1.44
SPIN3-213ENST00000638834 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
SPIN3-213ENST00000638834 TIAM1Q13009 1591 aa24■■□□□ 1.43
SPIN3-213ENST00000638834 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
SPIN3-213ENST00000638834 PLXNC1O60486 1568 aa23.99■■□□□ 1.43
SPIN3-213ENST00000638834 CEP162Q5TB80 1403 aa23.99■■□□□ 1.43
SPIN3-213ENST00000638834 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
SPIN3-213ENST00000638834 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
SPIN3-213ENST00000638834 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
SPIN3-213ENST00000638834 MROH2AA6NES4 1674 aa23.97■■□□□ 1.43
SPIN3-213ENST00000638834 A2MP01023 1474 aa23.96■■□□□ 1.43
SPIN3-213ENST00000638834 MBD5Q9P267 1494 aa23.96■■□□□ 1.43
SPIN3-213ENST00000638834 DMRT2Q9Y5R5 561 aa23.96■■□□□ 1.43
SPIN3-213ENST00000638834 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
SPIN3-213ENST00000638834 NPATQ14207 1427 aa23.93■■□□□ 1.42
SPIN3-213ENST00000638834 PTPRTO14522 1441 aa23.93■■□□□ 1.42
SPIN3-213ENST00000638834 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
SPIN3-213ENST00000638834 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.41
SPIN3-213ENST00000638834 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.41
SPIN3-213ENST00000638834 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
SPIN3-213ENST00000638834 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
SPIN3-213ENST00000638834 GGT6Q6P531 493 aa23.85■■□□□ 1.41
SPIN3-213ENST00000638834 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
SPIN3-213ENST00000638834 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
SPIN3-213ENST00000638834 CAMSAP1Q5T5Y3 1602 aa23.82■■□□□ 1.4
SPIN3-213ENST00000638834 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
SPIN3-213ENST00000638834 DHX29Q7Z478 1369 aaKnown RBP23.81■■□□□ 1.4
SPIN3-213ENST00000638834 CAMSAP2Q08AD1 1489 aa23.8■■□□□ 1.4
SPIN3-213ENST00000638834 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
SPIN3-213ENST00000638834 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
SPIN3-213ENST00000638834 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
SPIN3-213ENST00000638834 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
SPIN3-213ENST00000638834 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
SPIN3-213ENST00000638834 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
SPIN3-213ENST00000638834 RSPH4AQ5TD94 716 aa23.75■■□□□ 1.39
SPIN3-213ENST00000638834 NCKAP5LQ9HCH0 1330 aa23.74■■□□□ 1.39
SPIN3-213ENST00000638834 PLA2R1Q13018 1463 aa23.74■■□□□ 1.39
SPIN3-213ENST00000638834 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
SPIN3-213ENST00000638834 ARHGEF5Q12774 1597 aa23.73■■□□□ 1.39
SPIN3-213ENST00000638834 TCOF1Q13428 1488 aaKnown RBP23.72■■□□□ 1.39
SPIN3-213ENST00000638834 KIF3BO15066 747 aa23.71■■□□□ 1.39
SPIN3-213ENST00000638834 PKD2Q13563 968 aa23.69■■□□□ 1.38
SPIN3-213ENST00000638834 IQSEC2Q5JU85 1478 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms