RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-228ENST00000638223 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-228ENST00000638223 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.27
KCNMA1-228ENST00000638223 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
KCNMA1-228ENST00000638223 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-228ENST00000638223 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-228ENST00000638223 MIER1Q8N108 512 aa13.31□□□□□ -0.28
KCNMA1-228ENST00000638223 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
KCNMA1-228ENST00000638223 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
KCNMA1-228ENST00000638223 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-228ENST00000638223 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-228ENST00000638223 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
KCNMA1-228ENST00000638223 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
KCNMA1-228ENST00000638223 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-228ENST00000638223 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
KCNMA1-228ENST00000638223 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.28
KCNMA1-228ENST00000638223 ARAP1Q96P48 1450 aa13.27□□□□□ -0.28
KCNMA1-228ENST00000638223 SOX12O15370 315 aa13.27□□□□□ -0.29
KCNMA1-228ENST00000638223 KIF21BO75037 1637 aa13.26□□□□□ -0.29
KCNMA1-228ENST00000638223 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
KCNMA1-228ENST00000638223 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
KCNMA1-228ENST00000638223 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
KCNMA1-228ENST00000638223 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
KCNMA1-228ENST00000638223 TMF1P82094 1093 aa13.22□□□□□ -0.29
KCNMA1-228ENST00000638223 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-228ENST00000638223 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
KCNMA1-228ENST00000638223 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
KCNMA1-228ENST00000638223 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.29
KCNMA1-228ENST00000638223 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-228ENST00000638223 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
KCNMA1-228ENST00000638223 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
KCNMA1-228ENST00000638223 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
KCNMA1-228ENST00000638223 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
KCNMA1-228ENST00000638223 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
KCNMA1-228ENST00000638223 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
KCNMA1-228ENST00000638223 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
KCNMA1-228ENST00000638223 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
KCNMA1-228ENST00000638223 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
KCNMA1-228ENST00000638223 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
KCNMA1-228ENST00000638223 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
KCNMA1-228ENST00000638223 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-228ENST00000638223 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
KCNMA1-228ENST00000638223 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
KCNMA1-228ENST00000638223 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
KCNMA1-228ENST00000638223 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
KCNMA1-228ENST00000638223 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-228ENST00000638223 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-228ENST00000638223 FKBP8Q14318 412 aa13.13□□□□□ -0.31
KCNMA1-228ENST00000638223 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
KCNMA1-228ENST00000638223 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
KCNMA1-228ENST00000638223 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-228ENST00000638223 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
KCNMA1-228ENST00000638223 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
KCNMA1-228ENST00000638223 MYT1Q01538 1121 aa13.11□□□□□ -0.31
KCNMA1-228ENST00000638223 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
KCNMA1-228ENST00000638223 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
KCNMA1-228ENST00000638223 TROQ12816 1431 aaPredicted RBP13.1□□□□□ -0.31
KCNMA1-228ENST00000638223 SCAPERQ9BY12 1400 aa13.09□□□□□ -0.31
KCNMA1-228ENST00000638223 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-228ENST00000638223 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
KCNMA1-228ENST00000638223 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-228ENST00000638223 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
KCNMA1-228ENST00000638223 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
KCNMA1-228ENST00000638223 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
KCNMA1-228ENST00000638223 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-228ENST00000638223 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
KCNMA1-228ENST00000638223 ARXQ96QS3 562 aa13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-228ENST00000638223 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
KCNMA1-228ENST00000638223 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-228ENST00000638223 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-228ENST00000638223 EPRSP07814 1512 aaKnown RBP13.02□□□□□ -0.33
KCNMA1-228ENST00000638223 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
KCNMA1-228ENST00000638223 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
KCNMA1-228ENST00000638223 CUL7Q14999 1698 aa13□□□□□ -0.33
KCNMA1-228ENST00000638223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
KCNMA1-228ENST00000638223 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
KCNMA1-228ENST00000638223 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 EIF3AQ14152 1382 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 C9orf84Q5VXU9 1444 aa12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
KCNMA1-228ENST00000638223 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
KCNMA1-228ENST00000638223 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
KCNMA1-228ENST00000638223 HECW1Q76N89 1606 aa12.96□□□□□ -0.33
KCNMA1-228ENST00000638223 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
KCNMA1-228ENST00000638223 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
KCNMA1-228ENST00000638223 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
KCNMA1-228ENST00000638223 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
KCNMA1-228ENST00000638223 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-228ENST00000638223 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
KCNMA1-228ENST00000638223 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
KCNMA1-228ENST00000638223 TXNDC2Q86VQ3 553 aa12.93□□□□□ -0.34
KCNMA1-228ENST00000638223 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
KCNMA1-228ENST00000638223 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms