RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
SMARCA2-265ENST00000638139 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
SMARCA2-265ENST00000638139 DAPK1P53355 1430 aa13.91□□□□□ -0.18
SMARCA2-265ENST00000638139 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
SMARCA2-265ENST00000638139 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
SMARCA2-265ENST00000638139 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
SMARCA2-265ENST00000638139 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
SMARCA2-265ENST00000638139 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
SMARCA2-265ENST00000638139 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
SMARCA2-265ENST00000638139 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
SMARCA2-265ENST00000638139 ABCC5O15440 1437 aa13.89□□□□□ -0.19
SMARCA2-265ENST00000638139 ERICH6BQ5W0A0 696 aa13.87□□□□□ -0.19
SMARCA2-265ENST00000638139 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
SMARCA2-265ENST00000638139 MSH5O43196 834 aa13.86□□□□□ -0.19
SMARCA2-265ENST00000638139 SPATA31E1Q6ZUB1 1445 aa13.86□□□□□ -0.19
SMARCA2-265ENST00000638139 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
SMARCA2-265ENST00000638139 ZNF644Q9H582 1327 aaPredicted RBP13.86□□□□□ -0.19
SMARCA2-265ENST00000638139 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
SMARCA2-265ENST00000638139 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
SMARCA2-265ENST00000638139 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
SMARCA2-265ENST00000638139 PPP4R2Q9NY27 417 aa13.84□□□□□ -0.19
SMARCA2-265ENST00000638139 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
SMARCA2-265ENST00000638139 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
SMARCA2-265ENST00000638139 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
SMARCA2-265ENST00000638139 DISP1Q96F81 1524 aa13.83□□□□□ -0.2
SMARCA2-265ENST00000638139 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
SMARCA2-265ENST00000638139 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
SMARCA2-265ENST00000638139 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
SMARCA2-265ENST00000638139 KIAA0586Q9BVV6 1533 aa13.8□□□□□ -0.2
SMARCA2-265ENST00000638139 PZPP20742 1482 aa13.8□□□□□ -0.2
SMARCA2-265ENST00000638139 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
SMARCA2-265ENST00000638139 ADGBQ8N7X0 1667 aa13.78□□□□□ -0.2
SMARCA2-265ENST00000638139 CAMSAP2Q08AD1 1489 aa13.77□□□□□ -0.21
SMARCA2-265ENST00000638139 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
SMARCA2-265ENST00000638139 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
SMARCA2-265ENST00000638139 ITSN2Q9NZM3 1697 aa13.75□□□□□ -0.21
SMARCA2-265ENST00000638139 DHX29Q7Z478 1369 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-265ENST00000638139 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-265ENST00000638139 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
SMARCA2-265ENST00000638139 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
SMARCA2-265ENST00000638139 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-265ENST00000638139 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
SMARCA2-265ENST00000638139 CROCC2H7BZ55 1655 aa13.74□□□□□ -0.21
SMARCA2-265ENST00000638139 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
SMARCA2-265ENST00000638139 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-265ENST00000638139 KIF14Q15058 1648 aa13.72□□□□□ -0.21
SMARCA2-265ENST00000638139 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-265ENST00000638139 ADGRL2O95490 1459 aa13.72□□□□□ -0.21
SMARCA2-265ENST00000638139 USP47Q96K76 1375 aa13.72□□□□□ -0.21
SMARCA2-265ENST00000638139 ADCY10Q96PN6 1610 aa13.71□□□□□ -0.21
SMARCA2-265ENST00000638139 KDM5CP41229 1560 aa13.71□□□□□ -0.21
SMARCA2-265ENST00000638139 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-265ENST00000638139 PKD2Q13563 968 aa13.7□□□□□ -0.22
SMARCA2-265ENST00000638139 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-265ENST00000638139 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-265ENST00000638139 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
SMARCA2-265ENST00000638139 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
SMARCA2-265ENST00000638139 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
SMARCA2-265ENST00000638139 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
SMARCA2-265ENST00000638139 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
SMARCA2-265ENST00000638139 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
SMARCA2-265ENST00000638139 CEP170Q5SW79 1584 aa13.65□□□□□ -0.22
SMARCA2-265ENST00000638139 RALGAPBQ86X10 1494 aa13.65□□□□□ -0.22
SMARCA2-265ENST00000638139 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
SMARCA2-265ENST00000638139 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
SMARCA2-265ENST00000638139 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
SMARCA2-265ENST00000638139 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
SMARCA2-265ENST00000638139 NUP155O75694 1391 aa13.61□□□□□ -0.23
SMARCA2-265ENST00000638139 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
SMARCA2-265ENST00000638139 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
SMARCA2-265ENST00000638139 SHANK2Q9UPX8 1470 aa13.6□□□□□ -0.23
SMARCA2-265ENST00000638139 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
SMARCA2-265ENST00000638139 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
SMARCA2-265ENST00000638139 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
SMARCA2-265ENST00000638139 KDM5DQ9BY66 1539 aa13.6□□□□□ -0.23
SMARCA2-265ENST00000638139 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-265ENST00000638139 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
SMARCA2-265ENST00000638139 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
SMARCA2-265ENST00000638139 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
SMARCA2-265ENST00000638139 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
SMARCA2-265ENST00000638139 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.24
SMARCA2-265ENST00000638139 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 E9PCH4 1651 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 ABCA8O94911 1581 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 JPH4Q96JJ6 628 aa13.57□□□□□ -0.24
SMARCA2-265ENST00000638139 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
SMARCA2-265ENST00000638139 PTPRGP23470 1445 aa13.55□□□□□ -0.24
SMARCA2-265ENST00000638139 ATP10BO94823 1461 aa13.55□□□□□ -0.24
SMARCA2-265ENST00000638139 FBLN2P98095 1184 aa13.55□□□□□ -0.24
SMARCA2-265ENST00000638139 NUP160Q12769 1436 aa13.55□□□□□ -0.24
SMARCA2-265ENST00000638139 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms