RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 PBX2P40425 430 aa9.21□□□□□ -0.94
CHD2-228ENST00000637613 FKBP8Q14318 412 aa9.19□□□□□ -0.94
CHD2-228ENST00000637613 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
CHD2-228ENST00000637613 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.944e-8■■□□□ 13.3
CHD2-228ENST00000637613 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
CHD2-228ENST00000637613 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
CHD2-228ENST00000637613 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
CHD2-228ENST00000637613 SOX12O15370 315 aa9.08□□□□□ -0.96
CHD2-228ENST00000637613 RGS20O76081 388 aa9.08□□□□□ -0.96
CHD2-228ENST00000637613 ADGRD1Q6QNK2 874 aa9.07□□□□□ -0.96
CHD2-228ENST00000637613 MS4A4AQ96JQ5 239 aa9.07□□□□□ -0.96
CHD2-228ENST00000637613 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
CHD2-228ENST00000637613 NUDT7P0C024 238 aa9.05□□□□□ -0.96
CHD2-228ENST00000637613 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
CHD2-228ENST00000637613 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
CHD2-228ENST00000637613 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
CHD2-228ENST00000637613 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
CHD2-228ENST00000637613 TK2O00142 265 aa9□□□□□ -0.97
CHD2-228ENST00000637613 HRO43593 1189 aa8.99□□□□□ -0.97
CHD2-228ENST00000637613 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
CHD2-228ENST00000637613 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
CHD2-228ENST00000637613 SLC34A2O95436 690 aa8.97□□□□□ -0.97
CHD2-228ENST00000637613 TRIM41Q8WV44 630 aa8.97□□□□□ -0.97
CHD2-228ENST00000637613 PCDHGA4Q9Y5G9 962 aa8.96□□□□□ -0.98
CHD2-228ENST00000637613 PSDA5PKW4 1024 aaPredicted RBP8.95□□□□□ -0.98
CHD2-228ENST00000637613 KIF3CO14782 793 aa8.95□□□□□ -0.98
CHD2-228ENST00000637613 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
CHD2-228ENST00000637613 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
CHD2-228ENST00000637613 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
CHD2-228ENST00000637613 IFNLR1Q8IU57 520 aaPredicted RBP8.91□□□□□ -0.98
CHD2-228ENST00000637613 A0A0G2JS52 829 aa8.9□□□□□ -0.98
CHD2-228ENST00000637613 NLRP6P59044 892 aa8.89□□□□□ -0.99
CHD2-228ENST00000637613 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
CHD2-228ENST00000637613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.87□□□□□ -0.99
CHD2-228ENST00000637613 PSEN2P49810 448 aa8.87□□□□□ -0.99
CHD2-228ENST00000637613 ZFP91Q96JP5 570 aaPredicted RBP8.87□□□□□ -0.99
CHD2-228ENST00000637613 RIOK3O14730 519 aaKnown RBP8.86□□□□□ -0.99
CHD2-228ENST00000637613 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CHD2-228ENST00000637613 KDM4FA0A1W2PPD8 638 aa8.84□□□□□ -0.99
CHD2-228ENST00000637613 VGFO15240 615 aaPredicted RBP8.84□□□□□ -0.99
CHD2-228ENST00000637613 PTPN5P54829 565 aa8.84□□□□□ -0.99
CHD2-228ENST00000637613 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
CHD2-228ENST00000637613 Q6ZNB5 142 aa8.8□□□□□ -1
CHD2-228ENST00000637613 PPP4R3BQ5MIZ7 849 aa8.79□□□□□ -1
CHD2-228ENST00000637613 TMC2Q8TDI7 906 aa8.78□□□□□ -1
CHD2-228ENST00000637613 VPS9D1Q9Y2B5 631 aa8.77□□□□□ -1.01
CHD2-228ENST00000637613 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
CHD2-228ENST00000637613 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
CHD2-228ENST00000637613 KCNH8Q96L42 1107 aa8.76□□□□□ -1.01
CHD2-228ENST00000637613 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
CHD2-228ENST00000637613 KCNK17Q96T54 332 aa8.74□□□□□ -1.01
CHD2-228ENST00000637613 SLC4A5Q9BY07 1137 aa8.72□□□□□ -1.01
CHD2-228ENST00000637613 BCL11BQ9C0K0 894 aaPredicted RBP8.7□□□□□ -1.02
CHD2-228ENST00000637613 BHMG1C9JSJ3 638 aaPredicted RBP8.69□□□□□ -1.02
CHD2-228ENST00000637613 WNT2BQ93097 391 aa8.68□□□□□ -1.02
CHD2-228ENST00000637613 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
CHD2-228ENST00000637613 ITGBL1O95965 494 aaPredicted RBP8.66□□□□□ -1.02
CHD2-228ENST00000637613 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
CHD2-228ENST00000637613 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
CHD2-228ENST00000637613 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
CHD2-228ENST00000637613 LCE2BO14633 110 aa8.63□□□□□ -1.03
CHD2-228ENST00000637613 TBC1D12O60347 775 aa8.63□□□□□ -1.03
CHD2-228ENST00000637613 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
CHD2-228ENST00000637613 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
CHD2-228ENST00000637613 FOXK1P85037 733 aa8.61□□□□□ -1.03
CHD2-228ENST00000637613 TRAF7Q6Q0C0 670 aa8.61□□□□□ -1.03
CHD2-228ENST00000637613 PLCB2Q00722 1185 aa8.6□□□□□ -1.03
CHD2-228ENST00000637613 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
CHD2-228ENST00000637613 ZBED2Q9BTP6 218 aa8.59□□□□□ -1.03
CHD2-228ENST00000637613 NBPF3Q9H094 633 aa8.57□□□□□ -1.04
CHD2-228ENST00000637613 STK25O00506 426 aa8.56□□□□□ -1.04
CHD2-228ENST00000637613 ZNF454Q8N9F8 522 aa8.56□□□□□ -1.04
CHD2-228ENST00000637613 PTPREP23469 700 aa8.55□□□□□ -1.04
CHD2-228ENST00000637613 GFRA3O60609 400 aa8.53□□□□□ -1.04
CHD2-228ENST00000637613 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
CHD2-228ENST00000637613 PPP1R37O75864 691 aa8.52□□□□□ -1.05
CHD2-228ENST00000637613 DSG2Q14126 1118 aa8.51□□□□□ -1.05
CHD2-228ENST00000637613 NYAP1Q6ZVC0 841 aa8.51□□□□□ -1.05
CHD2-228ENST00000637613 FOSBP53539 338 aa8.5□□□□□ -1.05
CHD2-228ENST00000637613 KCNC4Q03721 635 aa8.5□□□□□ -1.05
CHD2-228ENST00000637613 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
CHD2-228ENST00000637613 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
CHD2-228ENST00000637613 PKD2Q13563 968 aa8.47□□□□□ -1.05
CHD2-228ENST00000637613 NRG2O14511 850 aaPredicted RBP8.46□□□□□ -1.06
CHD2-228ENST00000637613 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
CHD2-228ENST00000637613 SOWAHBA6NEL2 793 aa8.44□□□□□ -1.06
CHD2-228ENST00000637613 BCAMP50895 628 aa8.44□□□□□ -1.06
CHD2-228ENST00000637613 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
CHD2-228ENST00000637613 RABGEF1Q9UJ41 708 aa8.44□□□□□ -1.06
CHD2-228ENST00000637613 ZNF775Q96BV0 537 aaPredicted RBP8.43□□□□□ -1.06
CHD2-228ENST00000637613 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
CHD2-228ENST00000637613 LAPTM4BQ86VI4 370 aa8.41□□□□□ -1.06
CHD2-228ENST00000637613 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHD2-228ENST00000637613 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
CHD2-228ENST00000637613 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
CHD2-228ENST00000637613 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
CHD2-228ENST00000637613 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
CHD2-228ENST00000637613 HAP1P54257 671 aaPredicted RBP8.37□□□□□ -1.07
CHD2-228ENST00000637613 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
CHD2-228ENST00000637613 ZFRQ96KR1 1074 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms