RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
CTSD-208ENST00000636843 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.88
CTSD-208ENST00000636843 CLIP1P30622 1438 aa20.56■□□□□ 0.88
CTSD-208ENST00000636843 PCF11O94913 1555 aaKnown RBP20.55■□□□□ 0.88
CTSD-208ENST00000636843 RIMS1Q86UR5 1692 aaKnown RBP20.54■□□□□ 0.88
CTSD-208ENST00000636843 KIF14Q15058 1648 aa20.54■□□□□ 0.88
CTSD-208ENST00000636843 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
CTSD-208ENST00000636843 ATP10AO60312 1499 aa20.52■□□□□ 0.88
CTSD-208ENST00000636843 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
CTSD-208ENST00000636843 MLECQ14165 292 aa20.5■□□□□ 0.87
CTSD-208ENST00000636843 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
CTSD-208ENST00000636843 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
CTSD-208ENST00000636843 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
CTSD-208ENST00000636843 SIGLEC1Q9BZZ2 1709 aa20.49■□□□□ 0.87
CTSD-208ENST00000636843 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
CTSD-208ENST00000636843 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
CTSD-208ENST00000636843 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
CTSD-208ENST00000636843 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
CTSD-208ENST00000636843 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
CTSD-208ENST00000636843 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
CTSD-208ENST00000636843 ARHGEF12Q9NZN5 1544 aa20.44■□□□□ 0.86
CTSD-208ENST00000636843 KDM5CP41229 1560 aa20.43■□□□□ 0.86
CTSD-208ENST00000636843 HSPA2P54652 639 aa20.43■□□□□ 0.86
CTSD-208ENST00000636843 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
CTSD-208ENST00000636843 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
CTSD-208ENST00000636843 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.86
CTSD-208ENST00000636843 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
CTSD-208ENST00000636843 CDC42BPBQ9Y5S2 1711 aa20.39■□□□□ 0.85
CTSD-208ENST00000636843 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
CTSD-208ENST00000636843 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
CTSD-208ENST00000636843 REREQ9P2R6 1566 aa20.35■□□□□ 0.85
CTSD-208ENST00000636843 DIP2CQ9Y2E4 1556 aa20.35■□□□□ 0.85
CTSD-208ENST00000636843 ABCC1P33527 1531 aa20.35■□□□□ 0.85
CTSD-208ENST00000636843 CEBPAP49715 358 aaPredicted RBP20.34■□□□□ 0.85
CTSD-208ENST00000636843 AGLP35573 1532 aa20.31■□□□□ 0.84
CTSD-208ENST00000636843 ABCA6Q8N139 1617 aa20.3■□□□□ 0.84
CTSD-208ENST00000636843 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
CTSD-208ENST00000636843 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
CTSD-208ENST00000636843 ZNF777Q9ULD5 760 aaPredicted RBP20.29■□□□□ 0.84
CTSD-208ENST00000636843 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
CTSD-208ENST00000636843 PREX1Q8TCU6 1659 aa20.28■□□□□ 0.84
CTSD-208ENST00000636843 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
CTSD-208ENST00000636843 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
CTSD-208ENST00000636843 UHRF1BP1Q6BDS2 1440 aa20.26■□□□□ 0.83
CTSD-208ENST00000636843 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
CTSD-208ENST00000636843 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
CTSD-208ENST00000636843 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
CTSD-208ENST00000636843 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
CTSD-208ENST00000636843 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
CTSD-208ENST00000636843 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTSD-208ENST00000636843 CERKQ8TCT0 537 aa20.23■□□□□ 0.83
CTSD-208ENST00000636843 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
CTSD-208ENST00000636843 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
CTSD-208ENST00000636843 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
CTSD-208ENST00000636843 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
CTSD-208ENST00000636843 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
CTSD-208ENST00000636843 SYCP2Q9BX26 1530 aa20.21■□□□□ 0.83
CTSD-208ENST00000636843 C3P01024 1663 aa20.18■□□□□ 0.82
CTSD-208ENST00000636843 ATP7AQ04656 1500 aa20.15■□□□□ 0.82
CTSD-208ENST00000636843 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
CTSD-208ENST00000636843 NPATQ14207 1427 aa20.12■□□□□ 0.81
CTSD-208ENST00000636843 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
CTSD-208ENST00000636843 PTPRTO14522 1441 aa20.12■□□□□ 0.81
CTSD-208ENST00000636843 A2MP01023 1474 aa20.11■□□□□ 0.81
CTSD-208ENST00000636843 EHBP1L1Q8N3D4 1523 aa20.11■□□□□ 0.81
CTSD-208ENST00000636843 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
CTSD-208ENST00000636843 INO80Q9ULG1 1556 aaPredicted RBP20.1■□□□□ 0.81
CTSD-208ENST00000636843 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
CTSD-208ENST00000636843 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
CTSD-208ENST00000636843 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
CTSD-208ENST00000636843 PLXNC1O60486 1568 aa20.09■□□□□ 0.81
CTSD-208ENST00000636843 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
CTSD-208ENST00000636843 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
CTSD-208ENST00000636843 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
CTSD-208ENST00000636843 GGT6Q6P531 493 aa20.07■□□□□ 0.8
CTSD-208ENST00000636843 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
CTSD-208ENST00000636843 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
CTSD-208ENST00000636843 RSPH4AQ5TD94 716 aa20.02■□□□□ 0.79
CTSD-208ENST00000636843 ADGBQ8N7X0 1667 aa20.02■□□□□ 0.79
CTSD-208ENST00000636843 DHX29Q7Z478 1369 aaKnown RBP20.01■□□□□ 0.79
CTSD-208ENST00000636843 PTPRKQ15262 1439 aa20■□□□□ 0.79
CTSD-208ENST00000636843 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
CTSD-208ENST00000636843 NCOA2Q15596 1464 aa20■□□□□ 0.79
CTSD-208ENST00000636843 CAMSAP1Q5T5Y3 1602 aa19.99■□□□□ 0.79
CTSD-208ENST00000636843 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
CTSD-208ENST00000636843 PKD2Q13563 968 aa19.97■□□□□ 0.79
CTSD-208ENST00000636843 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
CTSD-208ENST00000636843 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
CTSD-208ENST00000636843 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
CTSD-208ENST00000636843 PLA2R1Q13018 1463 aa19.95■□□□□ 0.78
CTSD-208ENST00000636843 KIF3BO15066 747 aa19.94■□□□□ 0.78
CTSD-208ENST00000636843 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
CTSD-208ENST00000636843 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
CTSD-208ENST00000636843 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
CTSD-208ENST00000636843 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
CTSD-208ENST00000636843 TSPY4P0CV99 314 aa19.92■□□□□ 0.78
CTSD-208ENST00000636843 TSPY10P0CW01 314 aa19.92■□□□□ 0.78
CTSD-208ENST00000636843 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
CTSD-208ENST00000636843 FAM135AQ9P2D6 1515 aa19.9■□□□□ 0.78
CTSD-208ENST00000636843 TCOF1Q13428 1488 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms