RNA–Protein interactions for RNA: ENST00000636543.1

AC009542.2-204, humanhuman

TSL 3 BASIC

Gene AC009542.2, Length 433 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009542.2-204ENST00000636543 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
AC009542.2-204ENST00000636543 MLECQ14165 292 aa18.78■□□□□ 0.6
AC009542.2-204ENST00000636543 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.6
AC009542.2-204ENST00000636543 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
AC009542.2-204ENST00000636543 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
AC009542.2-204ENST00000636543 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
AC009542.2-204ENST00000636543 SIGLEC1Q9BZZ2 1709 aa18.73■□□□□ 0.59
AC009542.2-204ENST00000636543 KIF14Q15058 1648 aa18.73■□□□□ 0.59
AC009542.2-204ENST00000636543 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
AC009542.2-204ENST00000636543 ATP10AO60312 1499 aa18.72■□□□□ 0.59
AC009542.2-204ENST00000636543 CLIP1P30622 1438 aa18.72■□□□□ 0.59
AC009542.2-204ENST00000636543 RIMS1Q86UR5 1692 aaKnown RBP18.71■□□□□ 0.59
AC009542.2-204ENST00000636543 HSPA2P54652 639 aa18.71■□□□□ 0.59
AC009542.2-204ENST00000636543 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
AC009542.2-204ENST00000636543 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
AC009542.2-204ENST00000636543 MYO5CQ9NQX4 1742 aa18.68■□□□□ 0.58
AC009542.2-204ENST00000636543 C9orf84Q5VXU9 1444 aa18.67■□□□□ 0.58
AC009542.2-204ENST00000636543 ZNF518AQ6AHZ1 1483 aa18.67■□□□□ 0.58
AC009542.2-204ENST00000636543 FBXO41Q8TF61 875 aa18.67■□□□□ 0.58
AC009542.2-204ENST00000636543 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
AC009542.2-204ENST00000636543 CEBPAP49715 358 aaPredicted RBP18.64■□□□□ 0.57
AC009542.2-204ENST00000636543 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
AC009542.2-204ENST00000636543 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.57
AC009542.2-204ENST00000636543 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
AC009542.2-204ENST00000636543 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
AC009542.2-204ENST00000636543 KDM5CP41229 1560 aa18.62■□□□□ 0.57
AC009542.2-204ENST00000636543 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
AC009542.2-204ENST00000636543 CDC42BPBQ9Y5S2 1711 aa18.58■□□□□ 0.57
AC009542.2-204ENST00000636543 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.56
AC009542.2-204ENST00000636543 FER1L4A9Z1Z3 1794 aa18.58■□□□□ 0.56
AC009542.2-204ENST00000636543 DIP2CQ9Y2E4 1556 aa18.56■□□□□ 0.56
AC009542.2-204ENST00000636543 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
AC009542.2-204ENST00000636543 ABCC1P33527 1531 aa18.55■□□□□ 0.56
AC009542.2-204ENST00000636543 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
AC009542.2-204ENST00000636543 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
AC009542.2-204ENST00000636543 REREQ9P2R6 1566 aa18.52■□□□□ 0.56
AC009542.2-204ENST00000636543 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.56
AC009542.2-204ENST00000636543 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
AC009542.2-204ENST00000636543 AGLP35573 1532 aa18.5■□□□□ 0.55
AC009542.2-204ENST00000636543 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
AC009542.2-204ENST00000636543 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
AC009542.2-204ENST00000636543 ESF1Q9H501 851 aaKnown RBP18.48■□□□□ 0.55
AC009542.2-204ENST00000636543 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
AC009542.2-204ENST00000636543 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
AC009542.2-204ENST00000636543 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
AC009542.2-204ENST00000636543 KIDINS220Q9ULH0 1771 aa18.46■□□□□ 0.55
AC009542.2-204ENST00000636543 UHRF1BP1Q6BDS2 1440 aa18.46■□□□□ 0.55
AC009542.2-204ENST00000636543 SAMD9LQ8IVG5 1584 aa18.46■□□□□ 0.55
AC009542.2-204ENST00000636543 CCNB3Q8WWL7 1395 aa18.45■□□□□ 0.54
AC009542.2-204ENST00000636543 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
AC009542.2-204ENST00000636543 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
AC009542.2-204ENST00000636543 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
AC009542.2-204ENST00000636543 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
AC009542.2-204ENST00000636543 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
AC009542.2-204ENST00000636543 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
AC009542.2-204ENST00000636543 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
AC009542.2-204ENST00000636543 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
AC009542.2-204ENST00000636543 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
AC009542.2-204ENST00000636543 C3P01024 1663 aa18.38■□□□□ 0.53
AC009542.2-204ENST00000636543 ZMYM3Q14202 1370 aa18.38■□□□□ 0.53
AC009542.2-204ENST00000636543 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
AC009542.2-204ENST00000636543 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
AC009542.2-204ENST00000636543 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
AC009542.2-204ENST00000636543 A2MP01023 1474 aa18.35■□□□□ 0.53
AC009542.2-204ENST00000636543 GGT6Q6P531 493 aa18.35■□□□□ 0.53
AC009542.2-204ENST00000636543 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
AC009542.2-204ENST00000636543 PTPRTO14522 1441 aa18.33■□□□□ 0.53
AC009542.2-204ENST00000636543 NPATQ14207 1427 aa18.33■□□□□ 0.53
AC009542.2-204ENST00000636543 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
AC009542.2-204ENST00000636543 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
AC009542.2-204ENST00000636543 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
AC009542.2-204ENST00000636543 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
AC009542.2-204ENST00000636543 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
AC009542.2-204ENST00000636543 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
AC009542.2-204ENST00000636543 NCOA1Q15788 1441 aa18.3■□□□□ 0.52
AC009542.2-204ENST00000636543 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
AC009542.2-204ENST00000636543 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
AC009542.2-204ENST00000636543 PTPRKQ15262 1439 aa18.27■□□□□ 0.52
AC009542.2-204ENST00000636543 MROH2AA6NES4 1674 aa18.27■□□□□ 0.52
AC009542.2-204ENST00000636543 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.51
AC009542.2-204ENST00000636543 NCKAP5LQ9HCH0 1330 aa18.26■□□□□ 0.51
AC009542.2-204ENST00000636543 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
AC009542.2-204ENST00000636543 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
AC009542.2-204ENST00000636543 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
AC009542.2-204ENST00000636543 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
AC009542.2-204ENST00000636543 KIF3BO15066 747 aa18.23■□□□□ 0.51
AC009542.2-204ENST00000636543 LTBP4Q8N2S1 1624 aa18.22■□□□□ 0.51
AC009542.2-204ENST00000636543 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
AC009542.2-204ENST00000636543 ADGBQ8N7X0 1667 aa18.2■□□□□ 0.5
AC009542.2-204ENST00000636543 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
AC009542.2-204ENST00000636543 PKD2Q13563 968 aa18.19■□□□□ 0.5
AC009542.2-204ENST00000636543 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
AC009542.2-204ENST00000636543 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
AC009542.2-204ENST00000636543 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
AC009542.2-204ENST00000636543 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
AC009542.2-204ENST00000636543 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
AC009542.2-204ENST00000636543 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
AC009542.2-204ENST00000636543 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
AC009542.2-204ENST00000636543 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
AC009542.2-204ENST00000636543 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms