RNA–Protein interactions for RNA: ENST00000636543.1

AC009542.2-204, humanhuman

TSL 3 BASIC

Gene AC009542.2, Length 433 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009542.2-204ENST00000636543 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
AC009542.2-204ENST00000636543 ABCC9O60706 1549 aa25.78■■□□□ 1.72
AC009542.2-204ENST00000636543 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
AC009542.2-204ENST00000636543 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
AC009542.2-204ENST00000636543 DNAJC5BQ9UF47 199 aa24.33■■□□□ 1.49
AC009542.2-204ENST00000636543 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
AC009542.2-204ENST00000636543 NACADO15069 1562 aa24.29■■□□□ 1.48
AC009542.2-204ENST00000636543 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
AC009542.2-204ENST00000636543 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
AC009542.2-204ENST00000636543 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
AC009542.2-204ENST00000636543 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
AC009542.2-204ENST00000636543 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
AC009542.2-204ENST00000636543 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
AC009542.2-204ENST00000636543 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
AC009542.2-204ENST00000636543 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
AC009542.2-204ENST00000636543 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
AC009542.2-204ENST00000636543 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
AC009542.2-204ENST00000636543 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
AC009542.2-204ENST00000636543 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
AC009542.2-204ENST00000636543 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
AC009542.2-204ENST00000636543 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
AC009542.2-204ENST00000636543 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
AC009542.2-204ENST00000636543 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
AC009542.2-204ENST00000636543 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
AC009542.2-204ENST00000636543 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
AC009542.2-204ENST00000636543 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
AC009542.2-204ENST00000636543 CUX2O14529 1486 aa22.19■■□□□ 1.14
AC009542.2-204ENST00000636543 BAZ1BQ9UIG0 1483 aaKnown RBP22.16■■□□□ 1.14
AC009542.2-204ENST00000636543 NESP48681 1621 aa22.15■■□□□ 1.14
AC009542.2-204ENST00000636543 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
AC009542.2-204ENST00000636543 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
AC009542.2-204ENST00000636543 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
AC009542.2-204ENST00000636543 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
AC009542.2-204ENST00000636543 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
AC009542.2-204ENST00000636543 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
AC009542.2-204ENST00000636543 WIZO95785 1651 aa21.78■■□□□ 1.08
AC009542.2-204ENST00000636543 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
AC009542.2-204ENST00000636543 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
AC009542.2-204ENST00000636543 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
AC009542.2-204ENST00000636543 WDR62O43379 1518 aa21.56■■□□□ 1.04
AC009542.2-204ENST00000636543 CFTRP13569 1480 aa21.55■■□□□ 1.04
AC009542.2-204ENST00000636543 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
AC009542.2-204ENST00000636543 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
AC009542.2-204ENST00000636543 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
AC009542.2-204ENST00000636543 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
AC009542.2-204ENST00000636543 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
AC009542.2-204ENST00000636543 TRIM41Q8WV44 630 aa21.31■■□□□ 1
AC009542.2-204ENST00000636543 OSCARQ8IYS5 282 aa21.27■■□□□ 1
AC009542.2-204ENST00000636543 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
AC009542.2-204ENST00000636543 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
AC009542.2-204ENST00000636543 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
AC009542.2-204ENST00000636543 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
AC009542.2-204ENST00000636543 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
AC009542.2-204ENST00000636543 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
AC009542.2-204ENST00000636543 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
AC009542.2-204ENST00000636543 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
AC009542.2-204ENST00000636543 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
AC009542.2-204ENST00000636543 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
AC009542.2-204ENST00000636543 RIMBP3CA6NJZ7 1639 aa20.88■□□□□ 0.93
AC009542.2-204ENST00000636543 RIMBP3BA6NNM3 1639 aa20.88■□□□□ 0.93
AC009542.2-204ENST00000636543 RIMBP3Q9UFD9 1639 aa20.88■□□□□ 0.93
AC009542.2-204ENST00000636543 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
AC009542.2-204ENST00000636543 SOGA1O94964 1423 aa20.86■□□□□ 0.93
AC009542.2-204ENST00000636543 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
AC009542.2-204ENST00000636543 ARHGEF11O15085 1522 aa20.84■□□□□ 0.93
AC009542.2-204ENST00000636543 FBLN2P98095 1184 aa20.84■□□□□ 0.93
AC009542.2-204ENST00000636543 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
AC009542.2-204ENST00000636543 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
AC009542.2-204ENST00000636543 CUX1P39880 1505 aa20.75■□□□□ 0.91
AC009542.2-204ENST00000636543 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
AC009542.2-204ENST00000636543 CHD1O14646 1710 aa20.73■□□□□ 0.91
AC009542.2-204ENST00000636543 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
AC009542.2-204ENST00000636543 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
AC009542.2-204ENST00000636543 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
AC009542.2-204ENST00000636543 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
AC009542.2-204ENST00000636543 GRIN2BQ13224 1484 aa20.64■□□□□ 0.89
AC009542.2-204ENST00000636543 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
AC009542.2-204ENST00000636543 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
AC009542.2-204ENST00000636543 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
AC009542.2-204ENST00000636543 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
AC009542.2-204ENST00000636543 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
AC009542.2-204ENST00000636543 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
AC009542.2-204ENST00000636543 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
AC009542.2-204ENST00000636543 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
AC009542.2-204ENST00000636543 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.87
AC009542.2-204ENST00000636543 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
AC009542.2-204ENST00000636543 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
AC009542.2-204ENST00000636543 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
AC009542.2-204ENST00000636543 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
AC009542.2-204ENST00000636543 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
AC009542.2-204ENST00000636543 NUP160Q12769 1436 aa20.32■□□□□ 0.84
AC009542.2-204ENST00000636543 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
AC009542.2-204ENST00000636543 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
AC009542.2-204ENST00000636543 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
AC009542.2-204ENST00000636543 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
AC009542.2-204ENST00000636543 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
AC009542.2-204ENST00000636543 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
AC009542.2-204ENST00000636543 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
AC009542.2-204ENST00000636543 IGF1RP08069 1367 aa20.09■□□□□ 0.81
AC009542.2-204ENST00000636543 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms